5'-3' exoribonuclease 1 [Drosophila takahashii].

LOCUS       XP_016995150            1525 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016995150
VERSION     XP_016995150.3
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017139661.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XP_016995150.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..1525
                     /product="5'-3' exoribonuclease 1"
                     /calculated_mol_wt=174874
     Region          1..832
                     /region_name="XRN1"
                     /note="5'-3' exonuclease [Replication, recombination and
                     repair]; COG5049"
                     /db_xref="CDD:227382"
     Region          807..890
                     /region_name="XRN1_D2_D3"
                     /note="Exoribonuclease Xrn1 D2/D3 domain; pfam18334"
                     /db_xref="CDD:436419"
     Region          1060..1137
                     /region_name="SH3_12"
                     /note="Xrn1 SH3-like domain; pfam18129"
                     /db_xref="CDD:465661"
     Region          1298..1319
                     /region_name="XRN1_DBM"
                     /note="5-3 exonuclease XRN1 DCP1-binding motif; pfam18245"
                     /db_xref="CDD:408065"
     CDS             1..1525
                     /gene="pcm"
                     /coded_by="XM_017139661.3:351..4928"
                     /db_xref="GeneID:108056050"
ORIGIN      
        1 mgvpkffryi serypclsel arehsipefd nlyldmngiv hncshpddnn ihfhleeqqi
       61 fqdifnyvdk lfylikpqrl fflavdgvap rakmnqqrsr rfrsareaeq leakaaqrge
      121 rreherfdsn citpgtefmv rlqdglrafl ktkistdplw qrctvilsgq etpgegehki
      181 mdyirymkaq pdfdpntrhc lygldadlii lglcthelhf vvlreevkfg knikrasvee
      241 trffllhlgl lreylelefd alstpqqkld vaqliddwvl mgfmvgndfi phlpclhiss
      301 nalpllyrty iriypslggn inengklnlr rlqifmsalt eveleqfkeh addlkymnak
      361 teafdvdvad irgnesydtd lgalisesmk lyeddseedw sdeeaalmge fknykrnyyr
      421 nkfkreaqgq lldelghhyv nalqwvldyy yrgvqswdwy ypfhyapfis dlknieqvqi
      481 dfqlgtpflp fqqllavlpa asckllpvay hdlmlqpssp laefyplefd sdlngkkhdw
      541 eavvlipfid errllaamrn cesllteeer ernrhgpmyl ynhstesqgp meqqpplral
      601 anlfctevak wsreialnlp hsvcvelpna arhvffpgfp tmqhlpfdfe lrhdrvkvfe
      661 qvsrnqnmvl kprrrqledt leavagqyle qvvhigwphl ikakvvrvat rdrrideegi
      721 vpnesrrfds ecktlqehft trmgiqfany dvlvyvrtfa gsstefgakg vikvkdawss
      781 tvtgypaqgv vaelavkesl rkqfrkvedf fpagssiffi gnpyygsegt vqdpllaysc
      841 griqvnirvr pepdvqeara lqeerdrdll ntyevchlln ingralgrlt gtvwvvlgpr
      901 rekmenvakh niglqlkypr qneeragycc rsgnqwfyss laldlmrdyc erypdvvaff
      961 gvsndrgeyv feqdvfpdav gehrvedlan wvrqqphmkv eriscgsktv cretvellma
     1021 avdelrslpv kdvklqvkph llikpnvtlp evyrsrrpvr lfdrvvivrt iymvpvgikg
     1081 tvigihpvtd pnpvrlecvh avdtfcevlf dkavpncndi hgiaqdrvyk vpenalvviy
     1141 tndqsqkqne svqqatrtsq qresqqresq qresqqkasn sryvtaagsn wvpitmktqv
     1201 sdefvktsgq sgqlerempe qkpsnwrdra nksqsasdnw rqnparqqgg aapppvkaap
     1261 pstatatptp qaqtlalmsl lglkkdqepa pppaplpgqm panlpkpplf wqqeaqqsdr
     1321 iksqqwyrsa htgaqmvdqq irqqqqqqqq rmqqppaavl lapfnkgnqs sssmssfnnn
     1381 vrmmvapssy qpypqqqqsq yqpqfqqlqe innvpqqpry ssiqdfvpiq ayrprkakrq
     1441 dsqphttett gssslpekst neqqavglmq tlniqpstsq sessaanqsg gtdesvssss
     1501 sqaikprkqr vprigakfdl eyimh