NADH dehydrogenase (ubiquinone) complex I, assembly factor 6

LOCUS       XP_016995128             347 aa            linear   INV 09-DEC-2024
            homolog [Drosophila takahashii].
ACCESSION   XP_016995128
VERSION     XP_016995128.3
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017139639.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XP_016995128.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..347
                     /product="NADH dehydrogenase (ubiquinone) complex I,
                     assembly factor 6 homolog"
                     /calculated_mol_wt=39256
     Region          75..324
                     /region_name="SQS_PSY"
                     /note="Squalene/phytoene synthase; pfam00494"
                     /db_xref="CDD:425717"
     Site            order(80,99,102..103,106,110,224..225,228,232)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173830"
     Site            order(106..107,110,228..229,232)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173830"
     Site            106..110
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173830"
     CDS             1..347
                     /gene="sicily"
                     /coded_by="XM_017139639.3:17..1060"
                     /db_xref="GeneID:108056030"
ORIGIN      
        1 mfrekaqmrr lvrnwncrll lnaksgqeiv qtgyagvhqq aksesescaq ekgggaraad
       61 kngyaakhcm slvekydhen ylctlllpre lrraafalra fnvevsrsvs ghqiepqiar
      121 mrlkfwhdsi dkcfeaetqr syaedqpvlr elkhtvgsrk lnkvylrrlv tarerpasqg
      181 fesireleey aeqafsslll lllevggvrd lqvdhaashl gkaqgiatml raiplagrqq
      241 avcvplevlv rhgvsqerii rsksddkgve ecifevasaa nthlklarql heqvspqvrk
      301 iflsavatda ylerlrranf llthkscvgr dsllparlfw ksllnry