TNF receptor-associated factor 6 [Drosophila takahashii].

LOCUS       XP_016994738             477 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016994738
VERSION     XP_016994738.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017139249.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_016994738.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..477
                     /product="TNF receptor-associated factor 6"
                     /calculated_mol_wt=53625
     Region          103..145
                     /region_name="mRING-HC-C3HC3D_LNX1-like"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in ligand of Numb protein LNX1, LNX2, and similar
                     proteins; cd16637"
                     /db_xref="CDD:438299"
     Region          171..>232
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          332..475
                     /region_name="MATH_TRAF6"
                     /note="Tumor Necrosis Factor Receptor (TNFR)-Associated
                     Factor (TRAF) family, TRAF6 subfamily, TRAF domain,
                     C-terminal MATH subdomain; composed of proteins with
                     similarity to human TRAF6, including the Drosophila
                     protein DTRAF2. TRAF molecules serve as adapter...;
                     cd03776"
                     /db_xref="CDD:239745"
     Site            order(335,337,365..366,394,397,414)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239745"
     Site            order(373,387,431..433,443..447)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239745"
     CDS             1..477
                     /gene="Traf6"
                     /coded_by="XM_017139249.3:112..1545"
                     /db_xref="GeneID:108055756"
ORIGIN      
        1 mqrvqadqkp armpqhpqgh hhshseereh nsnettttsn ariaasssat ptaaagaagg
       61 gggapsgapt ppkslalnqn hqhhhhygsd tsgdqeeell dsryecaici dwlnepvlts
      121 cghrfcrscl aawmqknnqc cpmdnkrlsa ehdifpdnyt rreieqlkrd cpnsslgcsv
      181 vaspielhrh lpscpfrrqq epqeekcpfa kikcdfvgrp etnqleehlk admphhmqlm
      241 lqafqqtaia twqphkpsss sggggsveng hglppppqya ngvdeqivqt myqrivvleq
      301 rtreqetrle nlqkqlrlar qqapvdprys ngtivwrieq lgalvarlra nannqvyshe
      361 cytsphgykf carlniqprk phvlslhvhl mqsendyhld wpfkgriklc mvhpadvtls
      421 qhdtimtkpe ilafhqprea istrgfgfle yanisniiql gfcaddrlli kieiniv