ras-related protein rab-39 [Drosophila takahashii].

LOCUS       XP_016994378             218 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016994378
VERSION     XP_016994378.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017138889.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..218
                     /product="ras-related protein rab-39"
                     /calculated_mol_wt=24573
     Region          8..218
                     /region_name="Rab39"
                     /note="Rab GTPase family 39 (Rab39); cd04111"
                     /db_xref="CDD:133311"
     Site            10..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:133311"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133311"
     Site            order(18..24,34,40..41,68,124..125,127,157..159)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133311"
     Site            order(24..35,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:133311"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133311"
     Site            order(39,43..50,58,60)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133311"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133311"
     Site            order(42,44..46,62,64,71..72,75,79,81..84,175)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133311"
     Site            order(42..43,45,64..65,72,74,76..78)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133311"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:133311"
     Site            60..64
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:133311"
     Site            65..68
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133311"
     Site            order(68,70..80)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133311"
     Site            71..76
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:133311"
     Site            79..83
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:133311"
     Site            88..93
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:133311"
     Site            117..121
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:133311"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133311"
     Site            157..159
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133311"
     Site            173..175
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:133311"
     Site            216..218
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:133311"
     CDS             1..218
                     /gene="Rab39"
                     /coded_by="XM_017138889.3:322..978"
                     /db_xref="GeneID:108055521"
ORIGIN      
        1 mvepifeyqf rliligdstv gkssllkfft dgkfaelsdp tvgvdffarl iemkdgtqik
       61 lqlwdtagqe rfrsitksyy rnsvgvllvy disnhasfeh iplwmmeaqr hiephrpvfa
      121 lvgckldlin agghrevtte eaqkfakqhg lhfvetsars ganveeafrm vtqevyarir
      181 sgeykaedgw dgiksgfsrp nsldfnlvva epeksscc