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LOW QUALITY PROTEIN: doublesex- and mab-3-related transcription


LOCUS       XP_016993334             360 aa            linear   INV 09-DEC-2024
            factor 1 [Drosophila takahashii].
ACCESSION   XP_016993334
VERSION     XP_016993334.3
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017137845.3
KEYWORDS    RefSeq; corrected model.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XP_016993334.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..360
                     /product="LOW QUALITY PROTEIN: doublesex- and
                     mab-3-related transcription factor 1"
                     /calculated_mol_wt=39621
     Region          108..154
                     /region_name="DM"
                     /note="DM DNA binding domain; pfam00751"
                     /db_xref="CDD:459924"
     CDS             1..360
                     /gene="dmrt11E"
                     /coded_by="XM_017137845.3:1..1083"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 4 bases in 2 codons"
                     /db_xref="GeneID:108054777"
ORIGIN      
        1 mhfhqsqspn kdvrmgrsqr laangrrgda dtnpdpsdar mlrvctsdpl gdrdhltlpd
       61 cltaatssqc lnvrapvrsl lvdqrvrmsk dtsvtvtric qrerrllrtp kcarcrnhgv
      121 iscvkghkrl crwrecccpn cqlvvdrqrv maaqvalrrq qtmealeatt sssgskhpvn
      181 gttsgseged slassspppp psahpqspas vtnssssssa trqalmaqkr iykqrlrslq
      241 qstlhitaam eeykqrfptf ssplmermrk rrafadpeln hvmeatlggn alyfatvaaa
      301 vhqehlyhpm pptitpsvpp tfspddqmmr ntsgtasiss isekkpklsf siesimgist