protein retinal degeneration B isoform X1 [Drosophila takahashii].

LOCUS       XP_016993047            1295 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016993047
VERSION     XP_016993047.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017137558.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_016993047.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..1295
                     /product="protein retinal degeneration B isoform X1"
                     /calculated_mol_wt=142347
     Region          1..268
                     /region_name="SRPBCC_PITPNM1-2_like"
                     /note="Lipid-binding SRPBCC domain of mammalian PITPNM1-2
                     and related proteins (Class IIA PITPs); cd08889"
                     /db_xref="CDD:176898"
     Site            order(21..22,25,29,32,40,59,61,63,65,68,70,73,77,81..82,
                     84,86,88,90,95,97,99,102..103,109,111,202,208,210,220,
                     228..230,233)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176898"
     Site            65..83
                     /site_type="active"
                     /note="putative lipid exchange loop [active]"
                     /db_xref="CDD:176898"
     Site            order(118..147,153..177,196..197)
                     /site_type="active"
                     /note="putatative regulatory loop [active]"
                     /db_xref="CDD:176898"
     Site            164
                     /site_type="other"
                     /note="putative PKC phosphorylation site
                     [posttranslational modification]"
                     /db_xref="CDD:176898"
     Region          741..922
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     Region          1070..1201
                     /region_name="LNS2"
                     /note="This domain is found in Saccharomyces cerevisiae
                     protein SMP2, proteins with an N-terminal lipin domain and
                     phosphatidylinositol transfer proteins; smart00775"
                     /db_xref="CDD:197870"
     CDS             1..1295
                     /gene="rdgB"
                     /coded_by="XM_017137558.3:598..4485"
                     /db_xref="GeneID:108054546"
ORIGIN      
        1 mlikeyripl pltveeyria qlymiakksr eeshgegsgv eiiinepykd gpggngqytk
       61 kiyhvgnhlp gwiksllpks altveeeawn aypytrtryt cpfvekfsld ietyyypdng
      121 yqdnvfqlsg sdlrnrivdv idivkdqlwg gdyvkeedpk hfvsdktgrg plgedwleey
      181 wrevkgkkqp tprnmslmta ykicrvefry wgmqtklekf ihdvalrkmm lrahrqawaw
      241 qdewfgltie direlerqtq lalakkmggg eecsddstse pyvstavtaa sttgserkks
      301 apavppivtq qppsaeassd eeegeeeddd edendaigtg vdlsanqggs aqrsrsqsiq
      361 maqkgkfgsk galhspvgsa hsfdlqskkp haktaprrhv anwrmerlev dsksnsdeef
      421 fdcldtnetn slakwsslel lgegddsppp hggpssaasv ggrgssrqed sifnqdflmr
      481 vasergnkrq lrssasvdrs hdssppgsps tpscpttili lvvhagsvld aaseltakks
      541 dvttfrgsfe avmrqhypsl lthvtikmvp cpsictdalg ilsslspysf daspsaadip
      601 niadvpigai pllsvaspef hetvnktvaa anivyheflk seeghgfsgq ivmlgdsmgs
      661 llayealcrs ngsqpgtasn sggdaaasnv nthnplgarh srlddderfi eadldakrll
      721 vapsprrrrs ssssdsrask ldfevcdffm fgsplsvvla arklhdakaa larpnchqvy
      781 nlfhptdpia srlepllsar fsilapvnvp ryakyplgng qplhlleviq shpqhfndgn
      841 nllagrrlsd asmqstisgl ienvslstih alqnkwwgtk rldyalycpe glsnfpahal
      901 phlfhasywe spdviafilr qigkfegipf vgsnddkdna sfhpgqprek wikkrtsvkl
      961 knvaanhran dvivqegreq rlnarfmygp ldmitlhgek vdvhimkdpp agewtflste
     1021 vtdkngrisy sipdqlslgy giypvkmvvr gdhtsvdcym avvppltecv vfsidgsfta
     1081 smsvtgrdpk vragavdvcr hwqelgylli yitgrpdmqq qrvvswlsqh nfphglisfa
     1141 dglstdplgh ktaylnnlvq nhgisitaay gsskdisvyt nvgmrtdqif ivgkvgkklq
     1201 snatvlsdgy aahlaglqav ggsrpakgna rmviprgcfn lpgqtanprr rsnafelqla
     1261 nispcssnin spgssnhill aqlienaiek dtpaa