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LOCUS XP_013107470 1377 aa linear INV 02-SEP-2023 ACCESSION XP_013107470 VERSION XP_013107470.1 DBLINK BioProject: PRJNA1009844 DBSOURCE REFSEQ: accession XM_013252016.2 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1377 /organism="Stomoxys calcitrans" /db_xref="taxon:35570" /chromosome="4" Protein 1..1377 /product="DNA-directed RNA polymerase III subunit RPC1" /calculated_mol_wt=153562 Region 24..889 /region_name="RNAP_III_RPC1_N" /note="Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain; cd02583" /db_xref="CDD:259847" Site order(67,70,77,80) /site_type="other" /note="Zn-binding [ion binding]" /db_xref="CDD:259847" Site order(347,352,359,365) /site_type="active" /note="putative active site region [active]" /db_xref="CDD:259847" Region 971..>1042 /region_name="PRK14898" /note="DNA-directed RNA polymerase subunit A''; Provisional" /db_xref="CDD:237854" Region 1013..1353 /region_name="RNAP_III_Rpc1_C" /note="Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain; cd02736" /db_xref="CDD:132723" Site order(1015..1016,1020,1023,1350,1353) /site_type="other" /note="Rpb1 (Rpc1) - Rpb6 interaction site [polypeptide binding]" /db_xref="CDD:132723" Site order(1020..1081,1086..1100,1196..1207,1216..1269, 1272..1304,1307) /site_type="active" /note="cleft [active]" /db_xref="CDD:132723" Site order(1024,1027,1322,1332..1334,1340..1341,1343,1345,1350) /site_type="other" /note="Rpb1 (Rpc1) - Rpb2 (Rpc2) interaction site [polypeptide binding]" /db_xref="CDD:132723" Site order(1069,1298,1315..1316,1319) /site_type="DNA binding" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:132723" Site order(1230,1236..1237,1239,1249..1255,1257,1277, 1288..1289,1291) /site_type="other" /note="Rpb1 (Rpc1) - Rpb5 interaction site [polypeptide binding]" /db_xref="CDD:132723" Site 1307..1348 /site_type="active" /note="clamp [active]" /db_xref="CDD:132723" CDS 1..1377 /gene="LOC106087100" /coded_by="XM_013252016.2:116..4249" /db_xref="GeneID:106087100" ORIGIN 1 mpkeqfread likkishvqf sisspeeiqq esqlrivskn lyqaqrqpvp ygvldrrmgv 61 sskdstcetc gqglnecigh fgyldlslpv fhighfrsti nilqmicksc shvmlkdvdk 121 kmyekkllnp nfsylakkal hgqilakakk stkcpnceai nggvkkgpgl lkilhdpykg 181 kkqeslmskd lddllqaten nrelnqmlgs ynhmeelnpl tvlelfksip kpdipllgmt 241 ceganpanli vtrvfvppvc irpsvvsevk agtteddltm kqseillind viqkhmsggg 301 kieliqedwd flqlhvalyf hseisgipln mapkkttrgl vqrlkgkqgr frgnlsgkrv 361 dfsgrtvisp dpnlmihqvg vpervakilt ypervnpani qkmkdlvkng pnvhpganyv 421 qqrgstfkky laygnrdkva hdlkcgdive rhlcdgdivl fnrqpslhkm simchqakvq 481 pqrtfrfnec actpynadfd gdemnlhlpq teearaeali lmgnksnlvt pkngeiliaa 541 tqdfitggyl ltqkdefltr eqamqlaacf lagpdanmqi dmpppailkp rklwtgkqif 601 slllkpnkqc pvkvnlitkg rnytsnydlc vkdswvivrn selicgsmdk stmgsgtknc 661 ifyvilrdfg etyatkcmwr lariasyfiq nrgfsfgisd vtpsakllve kqrllekgya 721 kcdeyilemk kgtlqcqpgc tpeqtleavm lrelsgireq aakacfrelh ptnsalimal 781 sgskgsnini sqmiacvgqq aingkrvpng fenralphfe kfsaipaarg fvqnsffsgl 841 tptefffhtm agreglvdta vktaetgylq rrlvkcledl vvhydgsvrn aigeiveliy 901 ggdgldpvfm eiknkpvdmv rqlnhlracw pyreqeplpa kkivdttkni lkeeeftmsr 961 qdfqnevvsf iekvsekitk vqekyrdhpk lgneierlte gqirtfmrwv ndkynravte 1021 pgtavgavaa qsigepgtqm tlktfhfagv asmnitqgvp riveiinatk tistpvitae 1081 ivnntsmeya rkvksriekt tlgevssyie evykqddcyl virldlnrik vlgleinset 1141 irysictskl rikpalvdim gssiiivrid sskhgaalna elqrlssaiq nvvvaglphi 1201 sraviaidds rlpatyklci egaglrdvma tygvvgtktk snniwevynt lgieaartti 1261 mteitdvmeg hgmsvdhrhi mllasqmtsr gevlgitrhg lakmresvfn lasfektsdh 1321 lfdaayfgqt davdgvseri ilgmpaaigt glfklvhnhe ntelpeiqpp ifssvaa