Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

transcription factor grauzone [Stomoxys calcitrans].


LOCUS       XP_013104799             533 aa            linear   INV 02-SEP-2023
ACCESSION   XP_013104799
VERSION     XP_013104799.1
DBLINK      BioProject: PRJNA1009844
DBSOURCE    REFSEQ: accession XM_013249345.2
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Stomoxys calcitrans"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     Protein         1..533
                     /product="transcription factor grauzone"
                     /calculated_mol_wt=62439
     Region          3..73
                     /region_name="zf-AD"
                     /note="Zinc-finger associated domain (zf-AD); pfam07776"
                     /db_xref="CDD:462262"
     Region          255..272
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          280..300
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(285,287,289,291..292,295..296,299,315,317,321..322,
                     325..326,329,345,347,349,351..352,355..356,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          310..330
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          340..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          369..389
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          399..420
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          430..451
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(435,437,439,441..442,445..446,450,464,466,470..471,
                     474..475,478,492,494,496,498..499,502..503)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          459..479
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          487..505
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..533
                     /gene="LOC106085218"
                     /coded_by="XM_013249345.2:105..1706"
                     /db_xref="GeneID:106085218"
ORIGIN      
        1 mdncmvcles ngdvysrlsi nsdewnkynv qhiiekhlww wtknhfswic hecwsslwsf
       61 htfylrvqks qnmqfltlis geptkaeead ddenvtenpe elyedlipla krkrgrpklf
      121 eenlnitvad vdiksetgsl isdhheqnst imsdeegpec defqddcsss klssaseeiv
      181 nvpieksrkt asckknkpkd dgassihltk kydsfiaenh elfcslchip lsdfqnlilh
      241 fqkdhsstkp famccdkkfy kraifvdhly vhkdpeyfkc khcekvlsnr rclknhlesh
      301 desrkakync eecgknffrs gslakhkllh vpeeerkfqc iecdkkfase slrtqhmkvt
      361 hlnkyakicd vcgkafrery sfqrhlseht giptpniecd lcgmkltsiy glnrhrrlrh
      421 teenmqeqic pycskvspni aahkshiqys htmkrrhach lcekafrrpk elkehlstht
      481 gealytcphc prtfisnanm hkhrknehrk eweenrsqnr lllkvsegis kvl