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LOCUS XM_013249345 1954 bp mRNA linear INV 02-SEP-2023 (LOC106085218), mRNA. ACCESSION XM_013249345 VERSION XM_013249345.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249345.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1954 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1954 /gene="LOC106085218" /note="transcription factor grauzone; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085218" CDS 105..1706 /gene="LOC106085218" /codon_start=1 /product="transcription factor grauzone" /protein_id="XP_013104799.1" /db_xref="GeneID:106085218" /translation="MDNCMVCLESNGDVYSRLSINSDEWNKYNVQHIIEKHLWWWTKN HFSWICHECWSSLWSFHTFYLRVQKSQNMQFLTLISGEPTKAEEADDDENVTENPEEL YEDLIPLAKRKRGRPKLFEENLNITVADVDIKSETGSLISDHHEQNSTIMSDEEGPEC DEFQDDCSSSKLSSASEEIVNVPIEKSRKTASCKKNKPKDDGASSIHLTKKYDSFIAE NHELFCSLCHIPLSDFQNLILHFQKDHSSTKPFAMCCDKKFYKRAIFVDHLYVHKDPE YFKCKHCEKVLSNRRCLKNHLESHDESRKAKYNCEECGKNFFRSGSLAKHKLLHVPEE ERKFQCIECDKKFASESLRTQHMKVTHLNKYAKICDVCGKAFRERYSFQRHLSEHTGI PTPNIECDLCGMKLTSIYGLNRHRRLRHTEENMQEQICPYCSKVSPNIAAHKSHIQYS HTMKRRHACHLCEKAFRRPKELKEHLSTHTGEALYTCPHCPRTFISNANMHKHRKNEH RKEWEENRSQNRLLLKVSEGISKVL" misc_feature 111..323 /gene="LOC106085218" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature 867..920 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 942..1004 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(957..959,963..965,969..971,975..980,987..992, 999..1001,1047..1049,1053..1055,1065..1070,1077..1082, 1089..1091,1137..1139,1143..1145,1149..1151,1155..1160, 1167..1172,1182..1184) /gene="LOC106085218" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1032..1094 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1122..1187 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1209..1271 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1299..1364 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1392..1457 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1407..1409,1413..1415,1419..1421,1425..1430, 1437..1442,1452..1454,1494..1496,1500..1502,1512..1517, 1524..1529,1536..1538,1578..1580,1584..1586,1590..1592, 1596..1601,1608..1613) /gene="LOC106085218" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1479..1541 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1563..1619 /gene="LOC106085218" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 gtatatcgcc cacggttttt tgagtattta ctgataactt tttaatggag aatttaataa 61 acatactatc tacttgctat atacctaaat aaagtttaaa agaaatggat aattgcatgg 121 tatgtctgga atccaatggg gatgtatatt cccgcctcag catcaattcg gatgaatgga 181 ataagtataa tgtacaacat attattgaga aacacctttg gtggtggacc aaaaaccatt 241 tctcatggat atgtcacgaa tgctggtcct cactttggtc tttccacaca ttttatttgc 301 gagtgcaaaa atcgcagaat atgcaatttt tgacgctgat tagtggtgag ccaacaaagg 361 cagaggaggc ggatgatgat gagaacgtga ctgaaaatcc agaagaactt tatgaagacc 421 taataccatt ggccaaacgt aaacgagggc gtccaaaact atttgaagaa aatctcaaca 481 tcaccgtggc agacgtggac attaaaagcg agaccggttc ccttatttct gatcatcatg 541 aacaaaattc aactattatg tccgatgaag aaggtcccga gtgtgatgaa tttcaagacg 601 attgcagtag cagcaaacta tcttccgcat cggaagagat tgtaaatgtc ccaattgaaa 661 aaagtaggaa aacagcatca tgtaagaaaa ataaacccaa agatgatgga gcttcctcaa 721 tccatttaac aaaaaaatat gatagcttta tcgccgaaaa tcatgagtta ttttgctctc 781 tctgtcacat tccactttcg gattttcaaa acttgattct tcattttcaa aaggaccata 841 gcagcaccaa accttttgcc atgtgctgtg ataagaaatt ctataaacgg gcaatatttg 901 tggaccatct gtatgtgcac aaagatccgg aatattttaa atgtaaacac tgtgagaaag 961 tgctttcgaa tcggcggtgc ttgaaaaacc atttagaatc gcatgatgag tcccgaaaag 1021 cgaaatataa ttgtgaggaa tgtggaaaaa atttcttcag aagtggtagt ctggcgaagc 1081 acaagcttct gcatgtgccc gaggaggaaa gaaagtttca atgtatagag tgtgataaaa 1141 aatttgcttc ggaaagctta agaacacaac atatgaaagt aacgcattta aacaaatatg 1201 caaaaatatg tgatgtgtgc ggcaaagcat ttcgcgagag gtattcattt caacgtcatt 1261 tgtctgagca cactggaata cctacaccaa atatagaatg cgacctatgc ggtatgaagc 1321 tcacaagtat ctatggtctc aacagacatc gaagattgcg gcacactgaa gaaaatatgc 1381 aagaacagat ctgtccatat tgctccaaag tttcgcctaa tattgcagct cataaaagtc 1441 atatccagta ttctcataca atgaaaagga ggcatgcttg tcacctatgc gaaaaggctt 1501 ttcggcgacc taaagaatta aaagagcatt taagcaccca tacaggcgaa gccttatata 1561 cttgtcccca ttgcccgaga acctttattt cgaatgctaa tatgcacaag cataggaaaa 1621 atgaacatcg gaaagaatgg gaggaaaatc gttcacaaaa tagattatta ttaaaagtat 1681 ctgaaggcat aagcaaagta ttataagtca ccatcattgc ggttgaaagt gtcataattt 1741 tttaagacag ttttatttat ttattttttt tttgtcatat tgcatgttta atgtctgatg 1801 atattttaag ccaattcgtg aaacaatttt aattttgttg tagtttaagt tctatagatt 1861 aaatccattt cgcaaccgca attccgtata gccatatcgt ttatagtaat atttcccccc 1921 tgcataccaa atttcaatta tgttttgttt tttt