Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_013104796 592 aa linear INV 02-SEP-2023 ACCESSION XP_013104796 VERSION XP_013104796.1 DBLINK BioProject: PRJNA1009844 DBSOURCE REFSEQ: accession XM_013249342.2 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..592 /organism="Stomoxys calcitrans" /db_xref="taxon:35570" /chromosome="4" Protein 1..592 /product="transcription factor grauzone isoform X2" /calculated_mol_wt=70186 Region 2..80 /region_name="zf-AD" /note="Zinc-finger associated domain (zf-AD); smart00868" /db_xref="CDD:214871" Region <202..253 /region_name="RNA_polI_A34" /note="DNA-directed RNA polymerase I subunit RPA34.5; pfam08208" /db_xref="CDD:462395" Region 299..316 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region <322..>432 /region_name="COG5236" /note="Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]" /db_xref="CDD:227561" Region 324..344 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 357..377 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(362,364,366,368..369,372..373,376,390,392,396..397, 400..401,404,419,421,423,425..426,429..430,433) /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:275368" Region 385..406 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 414..434 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 444..465 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275371" Region 471..492 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(476,478,480,482..483,486..487,491,505,507,511..512, 515..516,519,533,535,537,539..540,543..544,548) /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:275368" Region 500..575 /region_name="SUF4-like" /note="N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins; cd20908" /db_xref="CDD:411020" Region 500..525 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 500..520 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(505,515,522,524,527,534) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:411020" Region 528..549 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 528..549 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" CDS 1..592 /gene="LOC106085217" /coded_by="XM_013249342.2:84..1862" /db_xref="GeneID:106085217" ORIGIN 1 mvcrlclkai psesviklyq dlncateale mvkhiekyld ievrqddvvs tmicqdchdh 61 leefhkfyqd vkgkqctlhn nflevelkee shdsrdvdvk nnddsnkvdg ndkisnvake 121 ieqamfespi dimkteadde kdeqeviatd vldddvdldk edvfaddgvd idsadlqsse 181 ddvplinlkt kkkitlkrky ttkgtpkepk erkqrrepre rkepkepker kerkvpkerk 241 epkeprkkge rkknlsaqel iatsmelkcd icqvqvntwk elrqhfllah trtpyikccd 301 tvyekqrpla dhlqwhknpd afkckmcnev lsnsrdltsh issqhpdnvd ilenyecehc 361 fkqfrnytif knhlrthskd kdvecqicnk rlesefqlrr hmdsfhkdas lhicdicgkh 421 fkckdsfkrh yqvhqgivep avqcsicksw lknqhslrih rfvheehpns cnvcgkqfkt 481 rhtlrrhmky whelernlhc tycdkvfrqk rnleehmath tgaqlytcph cgkesrsksn 541 myvhikrvhp newwqskver lnldpstehp evekyrqqqq dvlklydtfl nk