protein ultraspiracle [Stomoxys calcitrans].

LOCUS       XP_013102662             466 aa            linear   INV 02-SEP-2023
ACCESSION   XP_013102662
VERSION     XP_013102662.1
DBLINK      BioProject: PRJNA1009844
DBSOURCE    REFSEQ: accession XM_013247208.2
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Stomoxys calcitrans"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     Protein         1..466
                     /product="protein ultraspiracle"
                     /calculated_mol_wt=52222
     Region          95..171
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(97,100,114,117,133,139,149,152)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(102,143..144,146,148)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(106..109,115..116,118,120,122..123,126,134,146..147,
                     150,153,166..168,170..171)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(128,151,154..155,158..159,163..165,169..171)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(144..145,148)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            165..170
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(169,171)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          206..446
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(250..251,253..254,257,291,295,298,332..333,348,438,
                     441..442)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(259,262,266,271,276..277,279..280,284)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(354,358,362,379,385,399..400,403..404,407,421..422,
                     425..426,428..430,432..433,436,440)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(354,358,362,385,387,396,403,407,419,422..423,
                     426..429,432..433,436,440)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..466
                     /gene="LOC106083905"
                     /coded_by="XM_013247208.2:270..1670"
                     /db_xref="GeneID:106083905"
ORIGIN      
        1 mdndqdpgfr lrpmspqeik pdisllnenn atnfspkpgs pgpfgaidlq amnvanavaa
       61 aaaannqnqm lqttppqqql qqqyppnhpl sgskhlcsic gdrasgkhyg vyscegckgf
      121 fkrtvrkdlt yacredrnci idkrqrnrcq ycryqkclvc gmkreavqee rqrgtraana
      181 rasgvggitg sgvgnedfkp ssslrdltie rimeaeqkae sqsgdnvlpf lrvgnnsmvq
      241 sdykgavshl cqmvnkqlfq mveyarrtph fthlqredqi illkagwnel lianvawcsi
      301 dsldaeyatp ggghdssfgr rspvrqpqql flnqnfsyhr nsaikanvvs ifdrilsels
      361 ikmkrlnidr selsclkaii lfnpdirglk crkdvegcre kiyacldehc rtehpgddgr
      421 faqlllrlpa lrsislkcld hlfffrlige rpleqliaeq ldaqgc