Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_711657 1212 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_711657 VERSION XM_711657.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1212) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1212) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1212) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1212) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1212) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1212) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_711657.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1212 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1212 /gene="OYE2" /locus_tag="CAALFM_C601410CA" /db_xref="GeneID:3641603" CDS 1..1212 /gene="OYE2" /locus_tag="CAALFM_C601410CA" /note="Putative NAPDH dehydrogenase; induced by nitric oxide; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="NADPH dehydrogenase" /protein_id="XP_716750.2" /db_xref="CGD:CAL0000196620" /db_xref="GeneID:3641603" /translation="MTIDNEGIVIKPLGSTKLFQPIKLGSNTLSQRIAFAPSTRYRAT KDNIPTDLQLEYYSQRSEYPGTLIITEATYTSRQGGLVPYVPGIYNDAQTKSWKKIND AIHANGSFSSVQLWYLGRVANPKNLKDAGLPFVGASSVYWNEESEKLAKEAGNELREL TEEEIDHIVEVEYPNAAKRAIEAGFDYIEVHSAHGYLLDQFLNLASNKRTDKYGCGSI ENRARLLLRIIDKLIDIVGAERLAVRLSPWATFQNVDVEGEEIHSYIIDQLQERANSG NELAYISLVEPRVQASWDIAKENQVGSNEFILKHWKGKVIRAGTYAHELNKINEDINN DRTLIAFSRFFISNPDLVKKLHDGISLTPYERATFYNHDNFGYNTWIKYGENKVFNEQ EERKKLGKPLA" misc_feature 49..1098 /gene="OYE2" /locus_tag="CAALFM_C601410CA" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN; cd02933" /db_xref="CDD:239243" misc_feature order(109..111,115..117,214..216,340..342,730..732, 955..957,1018..1020,1024..1032) /gene="OYE2" /locus_tag="CAALFM_C601410CA" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature order(109..111,115..117,214..216,340..342,346..348, 367..369,571..573,580..582,586..588,730..732,751..753, 955..957,1018..1020,1024..1029) /gene="OYE2" /locus_tag="CAALFM_C601410CA" /note="active site" /db_xref="CDD:239243" misc_feature order(115..117,346..348,571..573,580..582,586..588, 1027..1029) /gene="OYE2" /locus_tag="CAALFM_C601410CA" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature 586..588 /gene="OYE2" /locus_tag="CAALFM_C601410CA" /note="catalytic residue [active]" /db_xref="CDD:239243" ORIGIN 1 atgacaatcg ataacgaagg cattgtcatt aaaccattgg gttcaacaaa attattccaa 61 ccaataaaac ttggttctaa cactttatca caaagaatag catttgcacc atccacacgt 121 tatagagcaa ccaaagataa tatccctacc gatttacaat tagagtatta ttctcaacga 181 tcagaatatc ctggaacttt aatcattact gaagcaactt atacatcacg tcaaggtgga 241 ttagtaccat atgttcctgg gatttataat gatgctcaaa ctaaaagttg gaagaaaatt 301 aatgatgcga ttcatgccaa tggaagtttc agttcagttc aattgtggta tttaggtaga 361 gttgctaatc ctaaaaattt gaaagatgct ggattaccat ttgttggagc ctcatcagtt 421 tattggaatg aagaaagtga aaaattggcc aaagaagctg gaaatgaatt gagggaattg 481 acagaagaag agatcgatca cattgttgaa gttgaatatc cgaatgctgc taaacgtgcc 541 attgaagcag gatttgatta tatcgaagtg cattcagctc atggttactt gttagatcaa 601 tttttaaatc ttgcctctaa taaaagaact gataaatatg gctgtggtag tattgaaaat 661 cgtgctcgtt tattattaag aattattgat aaattgattg atatagttgg tgctgaaaga 721 ttagctgttc gtttatcacc atgggccacg ttccaaaatg ttgacgtcga aggagaagaa 781 attcatagtt atatcattga tcaattacaa gaaagggcaa attctggtaa tgaattagcg 841 tatatttctc ttgttgaacc acgtgttcaa gcaagttggg atattgctaa agagaatcaa 901 gttggctcaa atgaatttat tttgaaacat tggaagggga aagtaattag agcaggtact 961 tatgctcatg aattaaataa aattaatgaa gatattaata atgatagaac tttaattgcc 1021 ttttcaagat ttttcatttc taatcctgat ttagtgaaaa aattacatga tgggatttct 1081 ttgactcctt atgaaagagc aacattttat aatcatgata attttggata taatacttgg 1141 attaaatatg gagaaaataa agttttcaat gaacaagaag aaaggaaaaa attgggtaaa 1201 cctttagctt ag