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LOCUS XM_707341 1686 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_707341 VERSION XM_707341.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1686) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1686) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1686) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1686) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1686) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1686) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707341.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1686 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1686 /gene="NAG3" /locus_tag="CAALFM_C604610CA" /db_xref="GeneID:3645969" CDS 1..1686 /gene="NAG3" /locus_tag="CAALFM_C604610CA" /note="Putative MFS transporter; similar to Nag4; required for wild-type mouse virulence and cycloheximide resistance; in gene cluster that includes genes encoding enzymes of GlcNAc catabolism; Spider biofilm repressed" /codon_start=1 /transl_table=12 /product="Nag3p" /protein_id="XP_712434.2" /db_xref="CGD:CAL0000181510" /db_xref="GeneID:3645969" /translation="MSDNTTLDNISVNSEKVVDYTIHHDDRKELERLVSHNKGVEKIV SELAEGAGQLGPLEQPYDIHKVETHPDPHTDYNDADPWKYPIDKETKLRLVDWTEGDK HNPKNFGKGFKWLCTVLLGMICFVVALGSAIVTGDLERPAADFGVSEEVIILASVTMF VIGFGVGPLVFAPMSEEVGRKPIYVVTLFVAVVFIVPCGAAQNIATLLICRLIDGTAF SAPMTLIGGSLADIWEGPERGTAMAVFSAAPFLGPVCGPIFGGLLCDYAPTWRWVYWT FLIVAGFFYVVFIVVVPETHHGILLKKRAKKLRKDTGDSRYRSFNELQIRTFAQVAKT SLLRPFVLLSELIVFLVTMYMSVLYGLLYMFFFAYPIVYQEGKGWSASKTGVMFIPIG VGVIASSLAAPFFNKDYNRRAQEYRDRGELPPAELRLIPMMIGCWFVPAGLFAFAWSS YQRLSWAGPCFSGFAVGFGFLLLYNPANNYIVDSYQHYAASALAAKTFVRSIWGACVP LFTIQMYHRLGDEWATSLMAFISLACCAIPYLFYIFGARIRTFSKYAYAPNMD" misc_feature 349..1647 /gene="NAG3" /locus_tag="CAALFM_C604610CA" /note="Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_Tpo1_MDR_like; cd17323" /db_xref="CDD:340881" misc_feature order(379..384,391..396,403..405,502..504,652..657, 661..669,676..678,736..738,745..750,757..759,1063..1065, 1072..1077,1084..1092,1099..1101,1171..1173,1183..1185, 1405..1410,1420..1422,1432..1434,1477..1479,1486..1491, 1498..1503,1510..1512) /gene="NAG3" /locus_tag="CAALFM_C604610CA" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340881" ORIGIN 1 atgtcagata acactacttt agacaatatc agtgtcaact ccgaaaaagt cgtcgactac 61 accattcacc atgacgaccg caaagaacta gaaagattag tctcccacaa caagggggtg 121 gaaaagatcg tctccgagtt agctgaaggt gctggtcagt tagggccatt ggaacagcca 181 tacgatattc acaaagtcga gactcaccca gatccacaca ccgactacaa cgacgccgac 241 ccttggaagt accccattga caaagaaaca aaattgcgtt tagtggactg gaccgaagga 301 gacaaacaca accccaaaaa ctttggtaag ggattcaaat ggttgtgcac ggtcttgtta 361 gggatgattt gttttgttgt ggctttaggt tcagctatcg ttactgggga tttagaaaga 421 ccagctgcag atttcggcgt atcagaggaa gttatcattt tggcttcagt tactatgttt 481 gttattggtt ttggtgtagg gccattggtg tttgccccaa tgtctgaaga ggtgggcaga 541 aaacctattt atgtggtcac cttatttgtt gcggtggtgt ttattgtccc ttgtggtgcc 601 gcccaaaaca tcgctacctt gcttatatgt cgtttgattg acggtacagc ctttagtgca 661 ccaatgacat tgattggtgg gtcgttggca gatatctggg aagggccaga aagaggtaca 721 gccatggcag tgttctccgc tgctccgttc ttgggacctg tgtgcggtcc aattttcggt 781 gggttgttgt gtgactatgc cccaacatgg agatgggtat actggacgtt tttgatcgtt 841 gcagggtttt tctatgttgt gtttattgtt gtggttccag aaacccacca cggaatattg 901 ttgaaaaaga gggccaaaaa gttgagaaag gatactggcg actctcgcta tagatcgttc 961 aacgaattgc aaatcagaac ttttgcccaa gtcgccaaga cctccctctt gcgtccattt 1021 gtcttgctca gcgagcttat tgtctttttg gtcaccatgt acatgtcagt gttgtacggt 1081 ttgctttaca tgttcttttt cgcttatcct atcgtctacc aagaaggcaa agggtggtca 1141 gcctcaaaaa ctggtgtcat gtttatccct attggtgtgg gtgtcattgc ttcgtcgttg 1201 gcagcacctt ttttcaacaa ggactacaat agacgtgccc aggaatacag agacagagga 1261 gagttgcctc cagctgaatt gcgtttaatt ccgatgatga ttgggtgttg gtttgtccct 1321 gctggtcttt tcgcctttgc ctggtcttca taccaaagac tttcgtgggc cggtccgtgt 1381 ttctcgggtt tcgccgttgg gttcgggttc cttttgttat acaacccagc aaacaactat 1441 atcgtcgact cctaccaaca ctatgctgca tctgcattag ccgctaaaac gtttgtcaga 1501 tccatctggg gtgcgtgtgt acccctcttc actatccaga tgtaccacag attaggcgac 1561 gaatgggcaa cctcccttat ggcattcatc tccttagcat gctgtgccat cccatatttg 1621 ttctacattt tcggtgcaag aattagaacc ttttccaaat acgcatacgc tccaaacatg 1681 gattaa