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LOCUS XM_707015 2640 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707015 VERSION XM_707015.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2640) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2640) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2640) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2640) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2640) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2640) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707015.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2640 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2640 /locus_tag="CAALFM_C604370WA" /db_xref="GeneID:3646294" CDS 1..2640 /locus_tag="CAALFM_C604370WA" /note="Has domain(s) with predicted ion channel activity, voltage-gated chloride channel activity, role in chloride transport, transmembrane transport and membrane localization" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_712108.2" /db_xref="CGD:CAL0000193876" /db_xref="GeneID:3646294" /translation="MSGLDRGANTATTTTTSSSSTTSSSSYSITYSTNEIPILTYSNN NNNNSPHIHQSSEVHETSHHSQYEENTFIDWSKESIIISRNPSVFLTNKWIILIFSAI ILGYFTSAIDLIQVSLNDFKKGICFSSKDSWTLLNPYMTCPVEDWYNWDQIFFTIRNP IVKFIINFPIYLILALAFGIIAGYLTYNRAYMIRQSGIPEIKLIISGFNLKIDQYLGF KTLLSKSIALIFVVSSGLWLGKEGPLVHISCCVFNIIYEIISKYYSNQNEAIRRELLT AATATGISVAFNSPIGGVLFVLESMPSYFIPTRIMWNSFVSATVATIILTGFKIFTDG RNFNEQVLFQVNFGNFSWLFVEIIPFIMLGIMGGVYGHYFIKFNGKFSNIKIRSLIRH RLCNLLKVDYKYGSILEILLIVLITTIINFPFEISKLPLNALLNLLFKSCTKDNDNSN LSTSKDFICQDSNGVALFKLLYIMIEGFWLTCYTFGLDLPGGILMPSLVMGAMTGRFL GIITQAIQSKFNWESLATCTADSCLVSPSSYAVIGAASFMTGVTKLTMSVVVIMFEMT GAVTYVLPIMGGVMTSKFVSDWLTPNNIYDTWLQNNFNQSSDGVEGVTTNNHLNSNFY DNGNQLINQGKGTGLISFQNLTSTIKSKLPNINIASSMIPLLDVKCLCLLPDQEQEQF TLNSLNSFINNDCHEGYPMIINYNNPIIVGYIPKSQLLNQLFLSLSNREIDSNSPISF QINHGVDIPERVEQLLSQRKQPQVVSINVHPIQSTLIINEKTPILLIIEMFEKLHLNS LIIVSNQDETSMTGFIDRFILNDLIIDKFEKLVDKLNDYQVIQQFDIEENAGRVEMTE FDYDNDEDDDMTRIDRKSIELIT" misc_feature 301..1806 /locus_tag="CAALFM_C604370WA" /note="ClC-3-like chloride channel proteins. This CD includes ClC-3, ClC-4, ClC-5 and ClC-Y1. ClC-3 was initially cloned from rat kidney. Expression of ClC-3 produces outwardly-rectifying Cl currents that are inhibited by protein kinase C activation. It has...; Region: ClC_3_like; cd03684" /db_xref="CDD:239656" misc_feature order(583..597,715..729,1474..1488,1783..1785) /locus_tag="CAALFM_C604370WA" /note="putative Cl- selectivity filter [active]" /db_xref="CDD:239656" misc_feature 721..723 /locus_tag="CAALFM_C604370WA" /note="putative pore gating glutamate residue [active]" /db_xref="CDD:239656" misc_feature 898..900 /locus_tag="CAALFM_C604370WA" /note="putative H+/Cl- coupling transport residue [active]" /db_xref="CDD:239656" ORIGIN 1 atgagtggcc ttgatagagg tgcaaatacg gctactacta ctactacttc ttcttcctcc 61 acaacatcgt catcatctta tagtataacc tattcaacta atgaaatacc gatattaaca 121 tattccaata ataataacaa caacagtcct catattcatc aatcttcaga agttcatgaa 181 acttcccatc attctcaata cgaagaaaat acatttattg attggtcaaa ggaatcaatt 241 ataatttcaa gaaatccatc tgtttttcta accaataaat ggatcatttt gattttttct 301 gccattatat tgggttattt cacatcagcc attgatttga ttcaagtatc actaaatgat 361 tttaaaaagg ggatatgttt tagttctaaa gattcttgga ctttattaaa tccttatatg 421 acttgccctg tcgaggattg gtacaattgg gatcaaatat ttttcaccat acgcaatcca 481 attgttaaat ttataattaa tttcccaatt tatttaattt tggcccttgc gtttggtata 541 atagctggat atttaacgta taatcgagca tatatgattc gtcaatcggg tataccagaa 601 attaaactaa ttatatctgg atttaatttg aaaattgatc aatatttggg atttaaaact 661 ttacttctga aaagtattgc cttaatattt gttgttagtt ccggattatg gttaggtaaa 721 gaaggccctt tggttcatat ttcatgttgt gttttcaata tcatttatga aatcatttct 781 aagtattata gtaatcaaaa tgaagcaatt cgaagagaat tattaactgc tgctactgcg 841 accggtatat cagtggcatt caattcccct attggtggag tattatttgt tttagaaagt 901 atgcctagtt atttcatccc cacaaggatc atgtggaatt catttgtttc cgccacagta 961 gctacaatta tcttgactgg atttaaaata tttactgatg gaagaaattt taatgaacaa 1021 gttttatttc aagtcaattt tggtaatttt agttggttat ttgttgaaat cattccattt 1081 ataatgctag ggataatggg tggggtttat ggtcattatt ttattaaatt taatgggaaa 1141 ttttctaata ttaaaatcag aagcttgatt cgacaccgat tatgtaattt attgaaagtt 1201 gattataaat atggctcaat tttggaaatc ttattgattg ttttaatcac aacaattata 1261 aatttcccat ttgaaatatc aaaactacct ttaaatgcat tattgaattt attatttaaa 1321 agctgcacca aagataacga taactcaaat ttgtcaacaa gtaaagattt catttgtcaa 1381 gattccaatg gagtagcatt atttaagcta ttatatatta tgatagaagg attttggtta 1441 acttgttata cttttggatt ggatttacct ggggggattt taatgccaag cttagtaatg 1501 ggtgccatga ctggtagatt tttaggaata atcactcaag ctatacaact gaaatttaat 1561 tgggaaagtt tggcaacttg tactgctgat tcatgtcttg tgtcaccaag ttcatatgct 1621 gtcattggtg ctgcatcctt catgactgga gtcaccaaat tgacaatgtc agtggtagta 1681 ataatgtttg aaatgactgg tgcagtgaca tatgtattac caattatggg tggagtaatg 1741 acatcgaaat ttgttagtga ttggttgaca ccaaataata tttatgatac ttggctccaa 1801 aataatttca accaatcgag tgatggtgta gaaggtgtta ctaccaataa ccaccttaac 1861 agcaattttt atgacaatgg aaaccaattg attaatcaag gtaaggggac tggattgatt 1921 tcatttcaga atttaactag tacaataaaa tcgaaattac ccaatattaa tattgcttca 1981 tcaatgatcc ccttattaga tgttaaatgt ttgtgtttat tacctgatca agaacaggaa 2041 cagtttacct tgaactcgtt aaactcattt attaataacg attgtcatga aggttatcca 2101 atgattatta attataataa cccaattata gtaggatata ttcctaaatc acaattgtta 2161 aatcaattat ttttatcatt atcaaatcga gaaattgatt caaattcacc aatttcattt 2221 caaatcaacc acggtgttga tattcctgaa cgagttgaac aattattatc gcaaagaaaa 2281 caaccacaag ttgttctgat taatgtgcat ccaatacaat ccacattgat aattaatgaa 2341 aaaaccccaa ttttattaat tattgaaatg tttgaaaaat tgcatctaaa tagtttgatt 2401 attgttagta atcaagacga gacttcaatg acgggattca tcgatcgatt tatattaaat 2461 gatttaataa ttgataaatt cgaaaaatta gttgataaat tgaatgatta tcaagtaatt 2521 caacaatttg atatagagga aaatgctgga agagtggaga tgactgaatt tgattatgat 2581 aatgatgaag atgatgatat gacaagaatt gataggaaat caattgaatt gattacatag