Candida albicans SC5314 phosphoglycerate kinase (PGK1), partial

LOCUS       XM_706231               1254 bp    mRNA    linear   PLN 18-APR-2022
            mRNA.
ACCESSION   XM_706231
VERSION     XM_706231.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 1254)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 1254)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 1254)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 1254)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_706231.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>1254
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /db_xref="GeneID:3647081"
     CDS             1..1254
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /note="Phosphoglycerate kinase; localizes to cell wall and
                     cytoplasm; antigenic in murine/human infection; flow model
                     biofilm, Hog1-, Hap43-, GCN-induced; repressed upon
                     phagocytosis; repressed in Spider biofilms by Bcr1, Ndt80,
                     Rob1, Brg1"
                     /codon_start=1
                     /transl_table=12
                     /product="phosphoglycerate kinase"
                     /protein_id="XP_711323.1"
                     /db_xref="CGD:CAL0000184891"
                     /db_xref="GeneID:3647081"
                     /translation="MSLSNKLSVKDLDVAGKRVFIRVDFNVPLDGKTITNNQRIVAAL
                     PTIKYVEEHKPKYIVLASHLGRPNGERNDKYSLAPVATELEKLLGQKVTFLNDCVGPE
                     VTKAVENAKDGEIFLLENLRYHIEEEGSSKDKDGKKVKADPEAVKKFRQELTSLADVY
                     INDAFGTAHRAHSSMVGLEVPQRAAGFLMSKELEYFAKALENPERPFLAILGGAKVSD
                     KIQLIDNLLDKVDMLIVGGGMAFTFKKILNKMPIGDSLFDEAGAKNVEHLVEKAKKNN
                     VELILPVDFVTADKFDKDAKTSSATDAEGIPDNWMGLDCGPKSVELFQQAVAKAKTIV
                     WNGPPGVFEFEKFANGTKSLLDAAVKSAENGNIVIIGGGDTATVAKKYGVVEKLSHVS
                     TGGGASLELLEGKDLPGVVALSNKN"
     misc_feature    7..1248
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /note="phosphoglycerate kinase; Provisional; Region:
                     PTZ00005"
                     /db_xref="CDD:173310"
     misc_feature    order(70..72,76..78,115..117,187..189,364..366)
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238195"
     misc_feature    order(598..609,1171..1179)
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /note="hinge regions; other site"
                     /db_xref="CDD:238195"
     misc_feature    order(712..714,934..936,1006..1008,1012..1014,1018..1029,
                     1117..1125)
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /note="ADP binding site [chemical binding]; other site"
                     /db_xref="CDD:238195"
     misc_feature    1120..1122
                     /gene="PGK1"
                     /locus_tag="CAALFM_C600750CA"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238195"
ORIGIN      
        1 atgtcattat ctaacaaatt atcagtcaaa gacttagacg ttgctggaaa gagagtcttt
       61 atcagagttg acttcaacgt cccattggac ggtaagacta tcaccaacaa ccaaagaatt
      121 gttgctgctt tgccaaccat caaatacgtt gaagaacata aaccaaaata cattgtcttg
      181 gcttcccact tgggtagacc aaacggtgaa agaaacgaca aatactcatt agctccagtt
      241 gctactgaat tggaaaaatt gttgggtcaa aaagtcacct tcttgaacga ttgtgttggt
      301 ccagaagtca ccaaggctgt tgaaaacgcc aaagatggtg aaatcttttt gttggaaaac
      361 ttgagatacc acattgaaga agaaggttct tccaaagaca aggatggtaa gaaagtcaag
      421 gctgatccag aagccgttaa gaaattcaga caagaattga cttcattggc tgatgtctac
      481 attaacgatg cctttggtac tgctcacaga gcccactcct ctatggttgg tctcgaagtt
      541 ccacagagag ctgctggttt cttaatgtcc aaagaattgg aatactttgc taaggctttg
      601 gaaaacccag aaagaccatt cttggccatt ttgggtggtg ctaaagtttc tgacaagatt
      661 caattgattg acaacttgtt ggacaaggtt gatatgttga ttgttggtgg tggtatggcc
      721 ttcactttca agaaaatctt gaacaaaatg ccaattggtg attctctttt cgatgaagcc
      781 ggtgctaaaa acgttgaaca cttggttgaa aaagctaaga aaaacaatgt tgaattgatc
      841 ttgccagttg attttgtcac tgctgataaa ttcgacaaag atgccaaaac ttcttctgct
      901 actgatgctg aaggtattcc agacaactgg atgggtttgg actgtggtcc aaaatctgtc
      961 gaattgttcc aacaagctgt tgccaaagct aagaccattg tttggaacgg tccaccaggt
     1021 gttttcgaat ttgaaaaatt cgccaacggt actaaatcct tattggatgc tgctgtcaaa
     1081 tctgctgaaa atggtaacat tgttatcatt ggtggtggtg atactgctac tgttgctaag
     1141 aaatacggtg tcgttgaaaa attatcgcac gtttctactg gtggtggtgc ttcattggaa
     1201 ttattagaag gtaaagactt gccaggtgta gttgctcttt ccaacaaaaa ctaa