Candida albicans SC5314 RNA lariat debranching enzyme (DBR1),

LOCUS       XM_705752               1398 bp    mRNA    linear   PLN 18-APR-2022
            partial mRNA.
ACCESSION   XM_705752
VERSION     XM_705752.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 1398)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 1398)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 1398)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 1398)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_705752.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>1398
                     /gene="DBR1"
                     /locus_tag="CAALFM_C602050WA"
                     /db_xref="GeneID:3647560"
     CDS             1..1398
                     /gene="DBR1"
                     /locus_tag="CAALFM_C602050WA"
                     /note="Debranchase; homozygous mutant accumulates lariat
                     intermediates of mRNA splicing; rat catheter biofilm
                     repressed"
                     /codon_start=1
                     /transl_table=12
                     /product="RNA lariat debranching enzyme"
                     /protein_id="XP_710844.2"
                     /db_xref="CGD:CAL0000191567"
                     /db_xref="GeneID:3647560"
                     /translation="MSNTLKIAIEGCCHGELNDIYNSIPDIESLDLLLICGDFQSLRN
                     KCDLQSLNVPLKYQRMADFHEYYSGKRKAPVLTIFIGGNHECSSYLQELKYGGWVAPN
                     IYYLGEFGSIWYKGLQITGWSGIFNYHTFIANNIEMEKLPFDSRTIRSVYHQKLANFL
                     KMYMMNHDMDIVLSHDWPVGIEKYGNVKRLLKLKPFFRDDIQRGQLGSPLNKFLIHYL
                     RPRYWFSGHLHVKFEARIVDLVRSTDKKKSATTVDLITESNKEEISLDMDDEEEEEGG
                     NVREVSFEEKFYFKQHSNPAKRPKNDLTPERDVCEHATEFLALDKCGKRRQFLDIKTI
                     EVHNTSHPSFINAGKLYYSKRSIAINKVVEKYLNDNRQDFTELNTKQILSNPQQFPLV
                     NELMPIIENDFKSMQKNITDEDFFMVPENFQTIAPTDDEHTESKLKYYPNNQTSEYCE
                     KFGIPKLVLSKESDQ"
     misc_feature    19..798
                     /gene="DBR1"
                     /locus_tag="CAALFM_C602050WA"
                     /note="Dbr1 RNA lariat debranching enzyme, N-terminal
                     metallophosphatase domain; Region: MPP_Dbr1_N; cd00844"
                     /db_xref="CDD:277322"
     misc_feature    order(34..36,40..42,112..114,247..252,523..525,679..681,
                     685..687,739..741)
                     /gene="DBR1"
                     /locus_tag="CAALFM_C602050WA"
                     /note="active site"
                     /db_xref="CDD:277322"
     misc_feature    order(112..114,247..249,523..525,679..681)
                     /gene="DBR1"
                     /locus_tag="CAALFM_C602050WA"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:277322"
     misc_feature    940..1365
                     /gene="DBR1"
                     /locus_tag="CAALFM_C602050WA"
                     /note="Lariat debranching enzyme, C-terminal domain;
                     Region: DBR1; pfam05011"
                     /db_xref="CDD:461518"
ORIGIN      
        1 atgtcaaata ccttgaagat tgccattgaa ggatgttgtc atggagaatt gaatgatatt
       61 tataattcaa tacctgacat cgagagttta gacctacttc taatatgtgg tgatttccag
      121 tccctacgca ataaatgtga tttacagagt ttgaatgtcc ccctcaaata tcaacgaatg
      181 gcagatttcc atgaatatta tagtggtaaa cgtaaagcac ctgtattaac tatttttatt
      241 ggtggtaacc atgaatgttc atcatacttg caagaattaa aatatggagg atgggtggca
      301 cccaatattt attatctagg tgaatttgga agtatatggt ataagggact acaaataacg
      361 ggatggagtg ggattttcaa ttatcatact ttcatcgcta acaatatcga gatggaaaaa
      421 ttaccatttg attctagaac aataagaagt gtttatcatc aaaaattggc gaattttttg
      481 aaaatgtata tgatgaatca tgatatggat attgttttga gtcatgattg gcctgtgggc
      541 attgaaaaat atggaaatgt gaagaggcta ctaaaattga aaccattttt cagagatgat
      601 attcaacgag gacaattagg tagtccacta aataaatttt tgatccatta tttgagacct
      661 aggtattggt tttcaggtca tttgcatgtc aaattcgaag caagaattgt tgatttggta
      721 aggagcacgg ataaaaagaa atcagccacg actgtagatt taattactga atcaaataag
      781 gaagaaatat ctctagatat ggatgatgag gaggaagaag aggggggaaa tgttagggaa
      841 gttagttttg aggagaaatt ttatttcaaa caacacctga atccagcaaa aagaccaaaa
      901 aatgatttaa ctcctgaaag ggatgtatgt gaacatgcaa cagagttttt ggctttagat
      961 aaatgcggta agcgtagaca gttcctagat atcaaaacta ttgaagtcca taacacttct
     1021 catccgtcat ttatcaatgc agggaaatta tattatagta agcgatcaat cgccataaac
     1081 aaagttgttg aaaagtattt gaatgacaat agacaagatt ttacagaatt aaataccaaa
     1141 caaatattga gtaaccctca acaattccca ttagtcaatg aattaatgcc cattattgaa
     1201 aatgacttca aatcaatgca gaaaaatata acagatgaag attttttcat ggtgccagag
     1261 aattttcaga ctattgcacc tacagacgac gaacacactg agtcaaagtt aaagtactat
     1321 ccgaacaatc aaacactgga atattgtgaa aagtttggta ttccaaaact agttttatct
     1381 aaagagtcgg accaatag