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LOCUS XM_070219214 5707 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_070219214 VERSION XM_070219214.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5707 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5707 /gene="Rok" /note="Rho kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108059116" CDS 33..3740 /gene="Rok" /codon_start=1 /product="rho-associated protein kinase 2 isoform X3" /protein_id="XP_070075315.1" /db_xref="GeneID:108059116" /translation="MVMDFMPGGDIVSLMGDYDIPEKWAIFYTMEVVLALDTIHNMGF VHRDVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQSQGVD NEYGRECDWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEVEISEQAK ALIRAFLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNF EDIERDEKPEEVFPVPKGFDGNHLPFIGFTYTGDYQLLSSDTVDAESKEASAAVNSSG AASNNHGHGHGHNHRHRPSNSNELKRLEALLERERGRSEALEQQDAGLRQQIELITKR EAELQRIASEYEKDLALRQHNYKVAMQKVEQEIELRKKTEALLVETQRNLENEQKTRA RDLNINDKVVSLEKQLLEMEQSYKTETEQTQRLKKHNTELDFTVKSQEEKVRDMVDMI DTLQKHKEELGQENAELQSLVVQEKNLRSQLKELHKEAENKMQTLINDIERTLGREQK AQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSREEANLQE VKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVA ALQSQLDQEHSKRNALLSELSLHSSEVAHLRSRENQLQKELGVQREAKRRFEEDLGQL KGTHHEALANNRELQAQLEAEQCFSRLYKTQANENREESAERLAKIEDLEEERVSLKH QVQVAVARADSEALARSIAEETVADLEKEKTIKELELKDFVMKHRNEINAKEAALATL KEAEIELHKKLGQKGVECEDLLQQHKKQQEELALMRSSKDEEIAKLLDKCKQEVLLKQ VAVNKLAEVMNRRDSDLPKQKSKARSTAELRKKEKEMRRLQQELSQERDKFNQLLLKH QDLQQLCAEEQQVKQKMVMEIDCKATEIEHLQSKLNETASLSSADNDPEDSQHSSLLS LTQDSVFEGWLSVPNKQNRRRGHGWKRQYVIVSSRKIIFYNSDIDKHNTTDAVLILDL SKVYHVRSVTQGDVIRADAKEIPRIFQLLYAGEGASHRPDEQSQLDVSVLHGNSNEER PGTIVHKGHEFVHITYHMPTACEVCPKPLWHMFKPPAAYECKRCRNKIHKEHVDKHDP LAPCKLNHDPRSARDMLLLAATSEEQSLWVARLLKRIQKSGYKANSSNNNSSTTDGSK ISPSQSTRSSYKPYAVNVQRSATLPANSSLK" misc_feature <33..782 /gene="Rok" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature 1140..>2840 /gene="Rok" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 2106..2321 /gene="Rok" /note="Shroom-binding domain found in Rho-associated coiled-coil containing protein kinase; Region: ROCK_SBD; cd22250" /db_xref="CDD:409019" misc_feature order(2109..2111,2118..2123,2127..2132,2139..2144, 2148..2153,2160..2165,2169..2174,2181..2186,2190..2195, 2202..2207,2214..2216,2223..2225) /gene="Rok" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:409019" misc_feature order(2115..2117,2124..2129,2133..2141,2145..2150, 2154..2171,2178..2180) /gene="Rok" /note="Shroom binding site [polypeptide binding]; other site" /db_xref="CDD:409019" misc_feature 2961..3311 /gene="Rok" /note="Rho-associated coiled-coil containing protein kinase pleckstrin homology (PH) domain; Region: PH_ROCK; cd01242" /db_xref="CDD:269948" misc_feature 3300..3491 /gene="Rok" /note="protein kinase C conserved region 1 (C1 domain) found in the Rho-associated coiled-coil containing protein kinase (ROCK) family; Region: C1_ROCK; cd20813" /db_xref="CDD:410363" polyA_site 5707 /gene="Rok" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actttgcctt tcaggatgcc aaatacttgt acatggtgat ggacttcatg cccggcggcg 61 acatagtgtc gctgatgggc gactacgaca taccggagaa gtgggccatc ttctacacga 121 tggaggtggt gctggccctg gacaccattc acaacatggg cttcgtgcac cgcgacgtca 181 agccggacaa catgctgctc gacagctatg gccacctgaa gctggccgac ttcgggacgt 241 gcatgcgaat gggcgccaac gggcaggtgg tgtccagcaa tgcggtgggc acgccggact 301 acatcagccc cgaggtgctg cagtcgcagg gcgtggacaa cgagtacggg cgcgagtgcg 361 actggtggtc ggtgggcatc ttcctctacg agatgctctt cggcgagacg cccttctatg 421 cggactccct ggtcggcacc tacggcaaga tcatggacca caagaactcg ctcagcttcc 481 cgcccgaggt ggagattagc gagcaggcca aggccctgat acgcgccttc ctcacggacc 541 gaacgcagcg cctgggacgc tacggcatcg aggacatcaa ggcgcatccg ttcttccgca 601 acgacacctg gtcgttcgac aatatacgcg agagcgtgcc gcccgtggtg ccggagctct 661 cgtccgacga cgatacgcgc aacttcgagg acatcgagcg ggacgagaag ccggaggagg 721 tgtttcccgt gcccaagggc ttcgatggca accacctgcc cttcatcggc ttcacctaca 781 cgggcgacta ccagctgctg tccagcgaca ccgtggacgc cgagtccaag gaggccagtg 841 cggcggtgaa cagcagcggg gcggccagta acaatcacgg tcacggtcac gggcacaatc 901 accgccaccg gccgtcgaac tccaacgagc tgaagcgcct ggaggccctg ctggagcggg 961 agcgcggccg ctcggaggcc ctggagcagc aggacgccgg tctgcggcag cagatcgagc 1021 tgataacgaa gcgcgaggcg gagctgcagc gcatcgcctc cgagtacgag aaggatctgg 1081 ccttgcggca gcacaactac aaggtggcca tgcagaaggt cgagcaggag atcgagctgc 1141 gcaagaagac cgaggcgctg ctcgtcgaga cgcagcgcaa tctggagaac gagcagaaga 1201 cgcgggcacg cgacctgaac atcaacgaca aggtcgtctc gctggagaag cagctactcg 1261 agatggagca gagctacaag acggagacgg agcagacgca gaggctgaag aagcacaaca 1321 ccgagctgga ctttacggtc aagtcgcagg aggagaaggt gcgcgacatg gtcgacatga 1381 tcgacacgct gcagaagcac aaggaggagc tgggccagga gaacgccgag ctgcagtcgc 1441 tggtggtgca ggagaagaat ctgcgctcgc agctcaagga gctgcacaag gaggccgaga 1501 acaagatgca gacgctgatc aacgacatcg agcggacgct gggacgcgag cagaaggccc 1561 aggaggacaa tcgggcgctg ctcgagaaga tcagcgattt ggagaaggcc catgccggcc 1621 tcgacttcga gctgaaggcc gcgcagggcc gctaccagca ggaggtgaag gcccaccagg 1681 agacggagaa gtcgcgactg gtgtcgcgcg aggaggccaa tctgcaggag gtcaaggcgc 1741 tgcagtcgaa gctcaacgag gagaagtccg cccgcatcaa ggccgatcag cattcgcagg 1801 agaaggagcg ccaactgagc atgctctcag tggactatcg ccagatccag ctgcgcctgc 1861 agaagctcga gggcgagtgc cgccaggagt cggagaaggt ggccgccctg cagtcgcagc 1921 tcgaccagga gcacagcaag cgcaacgccc tgctctcgga gctcagcctg cacagctcgg 1981 aggtggccca cctgcgatcc cgcgagaacc agctgcaaaa ggagctgggc gtgcagcgcg 2041 aggcgaagcg gcggttcgag gaggacctcg gccagctgaa gggcacccat cacgaggcgc 2101 tggccaataa ccgggagctg caggcccaac tcgaggccga gcagtgcttc tcgcggctct 2161 acaagacgca ggcgaacgag aaccgcgagg agagcgccga gcggctggcc aagatcgagg 2221 acctcgagga ggagcgcgtc tcgctcaagc accaggtcca ggtggccgtc gcccgcgccg 2281 attccgaggc tctggcccgc tccattgccg aggagacggt ggccgatctg gagaaggaga 2341 agaccatcaa ggagctcgag ctgaaggact ttgtgatgaa gcaccgcaac gagatcaacg 2401 ccaaggaggc cgctttggcc acgctcaagg aggccgagat cgagctgcac aagaagctgg 2461 gccagaaggg cgtcgagtgc gaggatctgc tgcagcagca caagaagcag caggaggagc 2521 tggcgctgat gaggagcagc aaggacgagg agatagccaa gctgctggac aagtgcaagc 2581 aggaggttct gctcaagcag gtggcggtga ataagctggc cgaggtgatg aaccgtcgcg 2641 actccgacct gcccaagcaa aagagcaagg cccgctccac cgccgagctg cgcaagaagg 2701 agaaggagat gcgccggctg cagcaggagc tatcgcagga gcgcgacaag ttcaaccagc 2761 tgctgctcaa gcaccaggac ctccagcagc tgtgcgccga ggagcagcag gtcaagcaga 2821 agatggtcat ggagatcgac tgcaaggcca ccgagatcga gcacctgcag agcaagctca 2881 acgagacggc gtcgctctcc tcggcggaca acgatcccga ggatagccag cactcctctc 2941 tgctctccct cacacaggac tcggtcttcg agggctggct gagtgtgccg aacaagcaga 3001 accggcgacg tggtcacggc tggaagcggc agtatgtcat cgtctcgtcg cgcaagatca 3061 tcttctacaa ctcggacatt gacaagcaca acaccaccga tgctgtgctc atcctggatc 3121 tgagcaaggt gtaccacgtt cgcagcgtca ctcagggcga tgttatacgc gccgatgcca 3181 aagagattcc gcgcatcttc cagctgctgt acgccggcga gggtgcctcc catcgtcccg 3241 acgagcagag ccagctggat gtgagcgttc tgcatgggaa tagcaatgag gagcgcccgg 3301 gcactattgt ccacaaaggt cacgagttcg tccacataac ctaccacatg cccacggcct 3361 gcgaggtgtg cccgaagcct ttgtggcaca tgttcaagcc gccggcggct tacgaatgca 3421 agagatgccg caacaagatt cacaaggagc atgtggacaa gcacgacccg ctggcgccct 3481 gcaagctgaa ccacgatccc cggagcgcaa gggacatgct gctgctggcc gccacgtccg 3541 aggagcagtc gctgtgggtg gcgcggctgc tgaagcgtat ccaaaagagt ggatacaagg 3601 ccaactcgtc gaacaacaac agcagcacca ccgatggcag caagatatcg cccagccaat 3661 cgacgcgctc ctcctacaag ccgtatgcgg ttaatgtgca acgctccgcg acgctgccag 3721 ccaattcatc gctgaaatga acgcccaacg atcccagatc ccagatggca aactgcagct 3781 ggagccggga gccagcctcc ttcagcccca acgaaactaa atgctatgca aaactgatac 3841 accgatatat agagaggaaa atagcaagag agaaagagca gctgcaactt gaagggcaac 3901 tgcaactact atcttaaata tacgctctaa acatacatgc tacatgcgct agtaatctac 3961 aaatattttt tgagtaattt acaagctaaa actaaactac aactaaactg aaactaaaac 4021 taaaacgaaa acttaaaaca aaaatactaa atactaaaaa actgtatctt aaagaacatg 4081 taaagccaat gcaactcgtt taacgcttac ctaacatcaa actggatggt gagaaggtct 4141 acatagaaca taaaacatag aacacaaaag tggcaacgtc aggcggctca gaagcgatgc 4201 actttgttgt actttatatt ctatatagta tatacatata aatataaata cgatatggta 4261 ttgtacgact tgctattgta ttctgtcatc gcattcagca caacgatgag agctgtattt 4321 agttaagtga atccatatcc atgtcgctgc aaaaggtgat ccttcacctt ttcccatata 4381 tcaaggcctt gtaagaacgt tttttttttc acatatatat acctatatac atactgttgt 4441 tgttgtgtag cgaatcagat tggccaaacg ttgttcttag ttgtaaagaa acagagctat 4501 acaatatata tttgtagaga tatatactag tatatatact cctccaagag catatcctgt 4561 aagccaattg ccagctaaca acaaacgaaa agaatcgagc aaccaacaaa aaccagaact 4621 aagttaaagc cactttacaa agctttaact tgtattccat ttaatgagca ctctttttta 4681 cataaatagt atagatttac gtgtacaaga tggaacgaat tgcgcgatga tatcgataga 4741 agcgaatatc aatcagttac ttaaatagca aacgcgaaag caactaaaaa tactgtcctg 4801 tttcggtttg cagttccgat tccgattcct agttgccttg gaggcaaaac gaaagttaat 4861 tctacagttt gtatttttta ttcttaacga acggggaacc ggaaacggaa acgtaaacga 4921 aacggaatag agtgtctcta gccatggaca gagcgaaaca tgaatcgaaa ctaaaactaa 4981 aactaaaagt aaaagtaaac taaactaaag tctaaagtaa agtaaagtac acctaactat 5041 acaaaacgaa agatgcgaca ccacagtgtt gtgtgcaaaa ggctacatct aagtattaaa 5101 tatccaatat gttctagttg taagctaagc aaattattta tttatatccc tgttcgatgg 5161 cgccatctgg cgttcgacaa cagaaacggc agcagcagct tagcactctc caatttgttt 5221 gtatttgatt tgtattccag taatgttgat tttaccttac ctatctatct atgatttcga 5281 agaacccgtt ttgagttttt ataattttat aatttgagta gtggtagttt gttttacaga 5341 gtgtacagag tgagaggcgc cagcgaattg catttaaaaa gtaacgataa tagcgatata 5401 tttccaagtt tcgggccttc ttcaaacatc ggtagtcggt tattgttaat cgccaatcgc 5461 ctatcgatag ccgcaaacgg ccgcaaagtt cggacttggg actttgaaat cgaagcgccg 5521 ctttcatttt ttactttgta tcttatttgc actattatta tgatcattcg tattacgttt 5581 atgtttaatt gtactctcta gtttaaccac gtttgtaatt gcatttgtcc tcgaatctta 5641 tcggcaggct tccaaatgga attgcaagcg tcaagcaaat aaaacgataa tgtgtataaa 5701 atcagta