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LOCUS XM_070218982 6274 bp mRNA linear INV 09-DEC-2024 transcript variant X6, mRNA. ACCESSION XM_070218982 VERSION XM_070218982.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6274 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6274 /gene="Tlk" /note="Tousled-like kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054955" CDS 74..3907 /gene="Tlk" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X6" /protein_id="XP_070075083.1" /db_xref="GeneID:108054955" /translation="MYLSYMSAGAQLQMAPQTTSALSHHHPNQQQQLQPPQQQQAQPP PPQQQQHFANHHSAQQQSQQQQEQQNPQQAQQQQAQQQQILPQPHLQHLHKHPHQLQL HQQQQQLHQQQQHFHQQQQQSLQGLHQGSSNPDSNMSTGSSHSEKDVNDMLSGGGAAP GVAAAAAIQQQHPAFAPALGMQQPPPPPPQHSNNGGEMGYLTAGTTTTASVTAVGKPR TPAERKRKRKMPQTSADEAGSGGGSGGAGAAVVNNSSLKGKSLAFRDMPKVNMSLNLG DRLGGSAGSGGGAGGAGSGGSGAGSGSGSGGGKSARIMLPVSDNKKINDYFNKQQTGV GVGVPGGGGAGGNTAGLRGSHTGGGSKSPSSAQQQQQTTQQQQQQASGVATGGGAGGA AANQQVQVQTSSAYALYPPASPQTQTPQQQQQQQPGADFHYVNSSKAQQQQQQQQQRQ QQQTSNQMVPPHVVVGLGGHPLSLASIQQQQQTPLSQQQQQQQQQQQQQQQQLGPPTT STASVVSTHPHQLGSLGVVGMVGVGVGVGVNVGVGPPLPPPPPMAMPAAIITYSKATQ TEVSLHELQEREAEHESGKVKLDEMTRLSDEQKCQIVGNQKTIDQHKSHIAKCIDVVK KLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELSRRQEEIT AEREEIDRQKKQLMKKRPAESGRKRNNNSNQNNQQQQQQQQHQQQQQQQNSNSNDSSQ LTGGVVTGPGSDRLGGAAGGVSVDSGLGGNNAGAIGGGAVGGGVGGGGVGSGGVGGVG GGGGRGLSRSNSTQANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGGLGGNDSGS CSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLERERNLHI RELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLN KDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF YLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKIT DFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVI FYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKED RMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQANSTGQTS FSAHMFGNMNQSSSS" misc_feature <1760..>2170 /gene="Tlk" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 2918..3721 /gene="Tlk" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(2927..2929,2966..2968,2972..2974,3080..3082, 3131..3142,3152..3154,3158..3160,3275..3277,3281..3283, 3287..3292,3296..3298,3338..3340,3347..3349,3416..3427) /gene="Tlk" /note="active site" /db_xref="CDD:270892" misc_feature order(3152..3154,3158..3160,3275..3277,3281..3283, 3287..3289,3347..3349,3416..3427) /gene="Tlk" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3335..3373,3386..3427) /gene="Tlk" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" polyA_site 6274 /gene="Tlk" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttcaggtaa ggatatacaa caattttgtt attatttgtg tcttgaaata ctttttatgg 61 atatagcaaa gcgatgtatc tgtcctacat gtccgccggc gcacagttgc agatggcccc 121 gcagaccact tcggccctaa gtcaccacca tcccaatcag cagcagcagc tgcagccgcc 181 gcagcaacag caggcacagc ccccgcctcc gcaacagcag cagcactttg ccaaccatca 241 cagcgcccag cagcagtcgc agcaacagca ggagcaacag aatccccagc aggcgcaaca 301 gcagcaggcg cagcagcagc agatcctccc gcagccgcat ctgcagcacc tgcacaagca 361 tccgcaccag ctgcaactgc accagcagca gcagcagctc caccagcagc agcaacactt 421 ccaccagcag cagcaacagt cgctgcaggg gctgcaccag ggcagcagca atccggattc 481 gaatatgagc actggctcct cgcacagcga gaaggatgtc aacgatatgc tgagtggcgg 541 cggagcagcg cccggagtag ctgccgcggc agccattcaa cagcaacatc ccgcctttgc 601 gcccgccctg ggaatgcagc agccaccgcc gccgccgccg cagcactcca ataacggggg 661 cgagatgggc tacttgacgg cgggcacgac cacgacggcc tcggtgacgg cggtgggcaa 721 gcccaggacg ccggcggagc ggaagcggaa gaggaaaatg ccgcagacca gtgcggacga 781 ggcggggagt ggcggtgggt ccggcggagc tggagcagcc gtggtgaaca acagcagcct 841 gaagggcaaa tccctggcct ttcgtgatat gcccaaggtg aacatgagcc tgaatctggg 901 cgatcgtctg ggcggttcgg ccggcagtgg cggcggagcc ggaggcgccg gcagcggagg 961 gagtggcgcc ggttccggtt ccggcagtgg cggcggcaag agtgcccgca tcatgctgcc 1021 cgtcagcgac aacaagaaga tcaacgacta cttcaacaag cagcaaacgg gcgtgggcgt 1081 cggtgtgcca ggtggaggtg gtgcgggagg caataccgcc ggtctccgag gatcccacac 1141 gggtggcggc agcaagtcgc cctcatccgc ccagcagcag cagcagacga cccaacagca 1201 gcagcagcag gcgagcggag tggcgacggg cggtggggca ggaggagccg ccgccaacca 1261 gcaggtgcag gtgcagacga gcagcgccta cgccctgtat ccaccagcta gtccccaaac 1321 gcagacgccg cagcaacagc agcagcagca gccgggagcc gacttccact acgtcaactc 1381 cagcaaggcg cagcagcagc agcaacagca gcagcagcgc cagcagcaac agacttccaa 1441 tcaaatggtt cctccacacg tggtcgtcgg cctgggtggt catcccctga gcctcgcgtc 1501 catccagcag cagcagcaga cgcccctctc ccagcagcag cagcagcagc agcaacaaca 1561 gcagcagcaa cagcagcaac tgggaccgcc gaccacatcg acggcctctg tcgtgtccac 1621 gcatccgcac cagctcggct ccctgggagt tgtgggcatg gtcggtgtgg gcgtcggcgt 1681 tggggtaaat gtgggcgtgg gaccgccact gcctccgcca ccgccgatgg cgatgccggc 1741 ggccattatc acatacagca aggccaccca aacggaggtc tcgctgcacg agctgcagga 1801 acgcgaggcg gagcacgagt cgggcaaggt gaagctggac gagatgacgc ggctgtccga 1861 cgagcaaaag tgccagattg tcggcaacca gaagacgatc gaccagcaca agtcgcacat 1921 tgccaagtgc attgatgtgg tcaagaagct gctgaaggaa aagagcagca tcgagaagaa 1981 ggaggcgcga cagaagtgca tgcagaaccg cctgagactc ggccagtttg tgacccagcg 2041 agtgggcgcc acattccagg agaactggac ggacggctat gcgttccagg agctgagtcg 2101 gcggcaggag gagataaccg ccgagcgcga ggagatcgac cggcagaaga agcagctgat 2161 gaagaagcgt ccggcggagt ccggacgcaa gcgcaacaac aacagcaacc agaacaacca 2221 gcagcagcag cagcaacagc agcaccaaca gcagcagcag cagcagaatt ccaactcgaa 2281 cgattcctcg cagctgacgg gcggcgttgt caccggaccg ggcagcgatc gcctgggcgg 2341 cgcggcaggc ggcgttagcg tcgacagcgg attgggtggc aacaatgcgg gcgcaatcgg 2401 tggcggagct gtgggcggtg gcgttggagg cggcggcgtc ggaagcggcg gcgttggcgg 2461 tgtcggcggc ggcggaggac gtggtctatc gcgcagcaac tcgacgcagg ccaatcaggc 2521 tcaactgctg cacaatggcg gcggcggatc ggggggcaat gtgggcaact cgggcggcgt 2581 cggcgatcga ctgtcggatc gaggaggagg cggcggcctc gggggcaacg acagcggcag 2641 ctgctcggac tcgggcacgt tcctcaagcc ggatcccgtt tcgggggcat ataccgcgca 2701 ggagtactac gagtacgatg agatcctcaa gctgcgccag aatgccctca agaaggagga 2761 cgccgacctg cagctggaga tggagaagct ggagcgggag cgcaatctgc acatccgaga 2821 gctcaagcgg atactcaacg aggatcagtc ccgcttcaac aaccatcccg tgctgaatga 2881 tcgctacctt ctgctgatgc tgctgggcaa gggcggcttc tcagaggtcc acaaggcctt 2941 cgacctcaag gagcaacgct atgtcgcatg taaggtgcac caattaaaca aggattggaa 3001 ggaggataag aaagctaatt atatcaaaca cgctttgcgg gaatacaaca tccacaaggc 3061 gctggatcat ccgcgggtcg tcaagctcta cgacgtcttc gagatcgatg cgaattcctt 3121 ttgcacagtg ctcgaatact gtgatggcca cgatctggac ttctatttga agcaacataa 3181 gactataccc gagcgtgaag cgcgctcgat aataatgcag gttgtatctg cactcaagta 3241 tctaaatgag attaagcctc cagttatcca ctacgatctg aagcccggca acattctgct 3301 caccgagggc aatgtctgcg gcgagatcaa gatcaccgac tttggtctgt cgaaggtgat 3361 ggacgacgag aactacaatc ccgatcacgg catggatctg acctcccagg gagccggcac 3421 ttattggtat ctgccacccg agtgctttgt ggtgggcaaa aatccgccca agatctcctc 3481 caaggtggac gtgtggagtg tgggcgtgat cttttaccag tgtctgtacg gcaagaagcc 3541 cttcggtcat aaccaatcgc aggccacgat tctcgaggag aacacgatcc tgaaggccac 3601 cgaagtgcag ttctccaaca agccaaccgt ttccaatgag gcaaagagct tcattcgggg 3661 ctgcttggca tatcgcaagg aggatcgcat ggatgtgttc gcgctggcca ggcacgagta 3721 catccagccg ccgataccga agcacggccg aggctcgctc aaccagcagc agcaggcgca 3781 gcaacagcag cagcaacaac agcagcagca gcagcaacag tcgtcgacgt cgcaggccaa 3841 ttccaccggc cagacttcgt tctctgccca catgtttggc aatatgaatc agtcgagttc 3901 gtcctagctg ccaaccaagc gtaattccaa ctcataattc gccgccgccg cagtagcagc 3961 agcaacttca gctgccagcc aacagcaaca ccaacagcag cagcagcagc aacatcagca 4021 gcagcatctt caactccagc aataccagcc gaatcagcag ctccatttgc aaaacagtag 4081 cagcaactat gcggccacgc ttctcgatgc agcggccttt tgctacgaaa ccgtgatgga 4141 tgcagcccac ttccacaaca ataacaacaa cagcaccatc atcaacaaca atatgcagac 4201 aatgccggcg aatgctgtca atgctgctgc tgccggagga ggaggagcag gaggagcagc 4261 aggaggaggg ggaacaccga cctaccaagg gaaatacaag cgctggcagc agcaacagtt 4321 gcaacagcag gcgcaactgc aacagcagca acacaagcta ctgctgcaac aagagctgct 4381 gtagagtaag aaaaaaaata caagggtgat gatgatttac gacggaataa tgacaaggga 4441 gtttgagaga aggaggagag ctgcctgcaa cactgccgcc aagccaagct aatgttgctg 4501 ctgcaacagc aacaccgtca gcaacaacaa caacaacagt aacaacaccc caagaatttc 4561 cgcagcgagt cgcaaaacaa caacaaaaac ttaaattaat gaaactatat ataaatatat 4621 atatgcatat atatattaaa tgtgataaac aagcgtaaag caaaaaaaaa aatacaaaac 4681 aagaaaggaa agcagcaaat acagcaggag aaagacgaac aaccaagggg gaaaaacccg 4741 gaagataggg aaaagcaaag ctgcagcaaa aaaccagaag agaagagcat agaaagaggg 4801 agcagaagaa aagcagaaag ttgaaagctg agatgaattg ccgaggagaa agcttgagaa 4861 attgtttata aaggctgcta taaacacaca cttttttttt tttgttaact ataaatacca 4921 agcagaataa ttaatctaaa ataaataata attaaatgct aaatgtaaat tagtaagtag 4981 ggtggcatct aaaaacaaga gaagaacgca aagaacacga ttcccaagaa cgcgaaaagg 5041 cacataatat tttttctttg tattaaaaat aataatggta ccataaagaa aacgtagcaa 5101 attagcgtag gctaaatagc acagtataaa aactgaaact aaaaaaacag taaaagcagc 5161 agaaaaatag aaatgattgt aaacacgcag agcagaggaa acatttgcaa tgggaaatta 5221 caaattgttg cattgttttt tgggttatgt ttgtttgtag ttcaaacatt aaaataacac 5281 tcatacacac aacacaacac aacacagcac agcacacaga cactgcagac tacttttgcc 5341 ttacaagaag tgaaaaaaac actaatttta attgccaatt tccattttgt atacatgcat 5401 attcaatatt gtgtactcgc atatatacac acatatatat atttatcatt ttctacccgc 5461 gaatctttct ttttattttt ttaacgtatg caccaacgaa catttaattt taacgctttt 5521 aaacgaagtt aaaaccaact tataccctat cttaattttg aaatggaaaa gaaatcattc 5581 tttgtttgtt ttgtatcaaa atccaaaaga aatttaattt aaaaataaaa ttaaaaaata 5641 ccatcaatca cacaccgcac acacatatac atttgtatat actcgtatct gaacgacaaa 5701 caaaaaaccg aagcgataaa aactaaaaac ttaatcaaac gaaatgcaat tccaaaatat 5761 ccaagagaaa aagaatcaga taaccatttt ttttatatgc cacaagaaaa acgctaagaa 5821 catgagaaac ggcgagaaaa atcgatggaa ggggaaaagc tagagatcag gttctcagat 5881 cggatcagaa aatcggcaga aaaataaacc catttgaagt aatctacttc taattacata 5941 gtaaactaat gtaatagttt ttattaaata tatatatata tatgtatcga tatatatata 6001 catacatgtt ttttttttaa ttttaaaact atatttgtaa tgcactatgc gtaacattgt 6061 attaaatatt aatatccaag gcatattaat agaaatatat atataaacat aaaaaaccag 6121 aaaaaagaac atgaactacc aacctaaatg tttcaataat atatagatct atatgtatgt 6181 aaaaccgata tgaaatctgc ctaatgccag acaaaaaaaa accctacaag agaaagttga 6241 aagctccgaa gagtgaaaga gtgaaagaga tgga