Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218535 6587 bp mRNA linear INV 09-DEC-2024 (RhoGAPp190), transcript variant X6, mRNA. ACCESSION XM_070218535 VERSION XM_070218535.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6587 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6587 /gene="RhoGAPp190" /note="Rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056706" CDS 26..4243 /gene="RhoGAPp190" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X5" /protein_id="XP_070074636.1" /db_xref="GeneID:108056706" /translation="MRQFNISVIGLSGTEKDRGQVGVGKSCLCNRFMRPMADDYFIDH ISVLSQSDFSGRIVNNDHFLYWGDVRKTTEEGVEYQFNIIEQTEFMDDSTFQAFKVGK MDPYSKRCTATKVFSAEKLMYICKNQLGIEKEYEQKVMPDGRLSIDGFVVVFDVSPVP NRSVEKQVEFVQNVIATILKNKKPLVLVTTKNDDAYELYVREAEKISQRKDYKSTVQL IETSAHESINIDLAFLLLAQMIDKVKNRVKIISYQESAKSRKELLDTRSEAVTRLIRN QITDYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLHQYL DKFALALEYLLPDIGALNISDDDAWECARNYLQNHIEFEQYFFECPQASWTELVDMDE AEDEARIPFDVLETSEAETVFRNYLNSVQQDKKKIGWKQQFKMLLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDDIIEKSKQNFVELLLEHAQYFLQFKNVDN ITQEDVRQITDVIQEDSRYKMLDRLDQERRLMLVQHLRFIHCPIRDHCPFFYNCVDSL IEEVLSDKSASNHKTPSNVGGWKTSGSGSDRTLNLLIVGSEHLASDLLNDIRICTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNQQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGMRLSEMLHCDFIDHTQNHQKYVYDI LNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVAESTLVKANE HSIIIDVFIGDAKRRVEFILSSYHGTSQYRDELIHGYIYFYSAKRRSSLANLSILAAQ NANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFY NPFLKTAWDNKYEVENLHVEESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTD GSGSENYEMAPTRSLNSLNEERDISLDEIYDDNEKPKHLHQNCTESDSCASSTERRVR QQNAYYKANSKKPVAAKKQKKKKVAIPVQTPRVPPFGSYVSPPEIPLHYQRMVVGGGG GGGGGPGEKKKPEPCVPDFMKSDKSPEYSMVPELAAAGIFGAENIPEYSAKCLKEYEK LEKLEKRRIKEETARLRKLQEKEKEQEKKLKRKLKQNSKGLVESAEAQFGKLMISSEQ GEIPIFLNKCVEFIEKEGLDSEGIYRVPGSRAHVDMLFQRFEDDTNTEIDALDIPVNA VATALKDFFSKRLPPLFSKDIIKELEEIAGSRGVGNSKLNVEVKTDRSCRLIALKSLL QKLPPINFAILKYIFQHFVHVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLR PYLEDIVQTMIDQFPYLFCGKDAFVMV" misc_feature <467..739 /gene="RhoGAPp190" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 593..604 /gene="RhoGAPp190" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 689..697 /gene="RhoGAPp190" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 785..1024 /gene="RhoGAPp190" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1820..2272 /gene="RhoGAPp190" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cd22207" /db_xref="CDD:412064" misc_feature 3608..4210 /gene="RhoGAPp190" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an...; Region: RhoGAP_p190; cd04373" /db_xref="CDD:239838" misc_feature order(3713..3715,3827..3829,3839..3841,4085..4087, 4094..4099,4181..4183) /gene="RhoGAPp190" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239838" misc_feature 3713..3715 /gene="RhoGAPp190" /note="catalytic residue [active]" /db_xref="CDD:239838" polyA_site 6587 /gene="RhoGAPp190" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaatacgaaa accaggtacg tcaagatgcg tcagtttaac atctcggtca ttggactatc 61 cgggaccgaa aaggaccgcg gccaggtggg cgtgggcaag tcatgcctgt gcaacagatt 121 catgcgccca atggccgacg actacttcat cgatcacata tcagtgctca gccagagcga 181 cttcagtggc cggatcgtga acaacgacca ctttctctac tggggcgatg ttcgcaagac 241 gacggaggag ggcgtcgagt atcagttcaa tatcatcgag cagaccgaat tcatggacga 301 ctccaccttc caggccttta aggtgggcaa gatggatccg tactccaagc gttgcacagc 361 caccaaggtc ttttcggcgg agaaactaat gtatatatgc aagaatcagt tgggcatcga 421 gaaggagtac gaacagaagg tgatgcccga tggccggctg agtatcgatg gctttgtcgt 481 cgtcttcgat gtgagtcccg tgcccaatcg cagtgtggag aagcaggtgg aatttgtgca 541 gaacgtcata gccaccatat tgaagaacaa gaagccgctg gtgctggtga ccacgaagaa 601 cgacgacgcc tacgagctgt acgtacgcga ggcggagaag attagccagc gcaaggacta 661 caagagcacc gttcagctga tcgagacatc ggcccacgag agcatcaaca tcgatttggc 721 cttcctcctg ctcgcccaga tgatcgacaa ggttaagaac cgggtcaaga tcatctcgta 781 ccaggagtcg gccaagtcgc gcaaggagct actggacacg cgttccgagg cggttacgcg 841 actcattcgc aaccagatca ccgactatca tgtgctgtgg tcgcagggct ccaagatgct 901 gtcgcagtat cgcgaatgga acgagttcct caacatcttt ggccacgagg caggccagaa 961 gctctttcgg cggcatatga agaagctgcg cgacgatcat ctcaacaaga agctgcatca 1021 gtatttggac aagttcgctt tggccctgga atacctgctg ccggatatcg gggctttgaa 1081 tatcagcgac gatgatgcgt gggagtgcgc caggaattat ctgcagaatc acatcgaatt 1141 cgagcagtac ttcttcgagt gcccgcaggc ctcgtggacg gagctggtgg acatggacga 1201 ggcggaggac gaggcacgca ttccgttcga tgtgctcgag acctccgagg cggagacagt 1261 cttccgtaat tacttgaatt cggtgcagca ggacaagaag aagattggat ggaagcagca 1321 attcaagatg ctgctcgagg agtccggctt tgtgacgccc ggcaagcaat tgtccgaggt 1381 gcgagtcctt ttcatgggcc gcgaatgctt cgaggctctg tcggagcacg actgccagca 1441 gatctacgac atccaccagg acgacatcat cgagaagagc aagcagaact ttgtggagct 1501 actgctggag catgcccagt actttctgca gttcaagaac gtggacaata tcacgcagga 1561 ggatgtccgc cagatcacgg atgtcataca ggaggattcg cgctacaaga tgttggatcg 1621 tttggaccag gagcggcggc tgatgctcgt ccagcatttg cgcttcatcc actgccccat 1681 ccgggatcac tgcccctttt tctacaactg tgtcgatagc ctgatcgagg aggtgctgtc 1741 cgacaagtcg gccagcaatc acaagacgcc cagcaacgtc ggcggttgga agacatcggg 1801 cagcggcagc gatcgcacgc tcaatctgct gatcgttggc tccgagcatc tggccagcga 1861 tctgctcaac gacatacgca tctgcaccgg gagcaagggc gagtacatct acgagaacca 1921 gacgtattat ctcaactacc gaatcgccaa cggcgacatg gaggccttca aggccatcga 1981 tgtctattcg agtggtctca tttgcgtgta ctccaaccag caatcctttg agacgctcaa 2041 ggataacttg gagcgcacgc tgctctgcaa cttggagctg gaggataagt tcgagaacct 2101 gcccatcgtg ctcgtctacc agccgcagga tctcaaggag aacgaggtgg agtacttgcg 2161 caacgagggc atgcgactgt cggagatgct gcactgcgac ttcatcgatc atacgcagaa 2221 tcaccagaaa tatgtctacg acatactcaa cattgtcatc ctgtcactga agctgaccga 2281 gatgaagagc tacgagccat atccctccaa tcacaccgat ctgcggatcc tgtgctgcat 2341 cttctgtggc gatcagtacg atatcgagaa cattgtgcag ccgctggtcg ccgaatcgac 2401 gctggtcaag gccaacgagc actcgatcat aatcgatgtc ttcatcggcg acgccaagcg 2461 gcgggtcgag tttatcctgt cttcatatca cggcactagc cagtaccgcg atgagctaat 2521 ccatggctac atttactttt actccgccaa gcgtcgatct tcgttggcga atctaagcat 2581 cctggcagcc cagaatgcca acattccatt gcagattatc gcggtgaccg agagcggggg 2641 cgtaaatgcc tttttcaaca gcgatatttg ccagtttttg atcaccgagg gcaatgcggt 2701 ggccgatcgc ttcaagggca gctttatgac cttctcggcg gatcagtatg tcaagtttgc 2761 gttctataat ccattcctga agaccgcctg ggacaacaag tacgaggtgg agaacctgca 2821 tgtggaggag tcaattactt tggattcggg cgagggcacg ctggagaact cggttaacca 2881 gatgccacgc ccgccgccgc gccacgagag ctacatgctg tccaatacgc tgggaaccga 2941 tggttccggc agtgagaact acgaaatggc tcctacccga tctctcaact cattaaatga 3001 agaaagagat atatcattag atgaaatcta cgatgacaac gaaaagccca agcacctgca 3061 tcaaaactgc accgaatccg acagctgtgc cagttccacg gagcgacggg tgcgccagca 3121 gaacgcctac tacaaggcca acagcaagaa gccggtggcc gccaagaagc agaagaagaa 3181 gaaggtggcc attccggtgc agacgccgcg tgttcctccg ttcggctcat atgtgagtcc 3241 gccggaaatt ccgctgcact accagcgaat ggtcgttggc ggcgggggcg gaggcggcgg 3301 cgggccaggt gagaaaaaga aacccgaacc ttgcgttccc gatttcatga agagcgacaa 3361 atcgcctgag tattccatgg tgccagagct ggcggctgct gggatcttcg gtgcggagaa 3421 tatacccgaa tatagcgcca agtgcttgaa ggaatacgag aagttggaga agctagagaa 3481 gcggcgcatc aaggaggaga cggccaggtt gcgcaagctc caggagaagg agaaggagca 3541 ggagaagaag ctcaagcgca agctgaagca aaactccaag ggtctcgttg aatcggcgga 3601 ggcgcagttt ggcaagctga tgattagctc cgagcagggt gagatcccca ttttcctcaa 3661 caagtgcgtg gaatttatcg agaaggaggg cctggattcc gagggcattt atcgagtgcc 3721 cggcagcagg gcgcatgtcg acatgctatt ccaacgattc gaagatgata ccaacaccga 3781 gattgatgcg ctggacattc ccgttaacgc agtggccacg gcactcaagg actttttctc 3841 caagcgcctg ccgccgctgt tcagcaagga tatcatcaag gagctggagg agattgccgg 3901 ttcccgtggc gtgggcaatt ccaaactgaa tgtggaggtc aaaacggacc ggagttgccg 3961 cttgatagct ttaaaatcgc tgctccaaaa gctgccgccc atcaactttg ccatactcaa 4021 atacatattc cagcactttg tgcacgtctc ggacaactcg aagctaaata gcatggacag 4081 caagaacctg gccatctgct ggtggcccac actcattccc atcgacttca ccgacatggg 4141 ccacttcgag cagctgcgtc cgtatctgga ggacattgtc cagacaatga tcgaccagtt 4201 cccgtatctg ttctgcggca aggatgcttt tgtcatggtc taggcctaga tccccgccag 4261 atcatggcgc acttggactt tcacttgacc gccggacgcg aagccaaaac gagatagtta 4321 gattcaatgt gcgagtgtat gaatgtgggc gccatccagt gccatgtgtg ctttgtgttt 4381 tctgggtgat caagatgtaa ggagtaatag ccataggaag gaaagaagga gggaagaaag 4441 gaaggaaagg aaggttagca ggaggcagcc catcgatcga tcgattcatt caaatgagga 4501 tcagcagcca ggcatataca tatttataat agtatataat atatacttgg gtctattgtg 4561 tgcgatttgt gtgattgtgc gtgcgtgcgt gtgcgtatgt gagaacagaa cttggctaag 4621 tagggtatat ttatttttta tatatacaat atatattttg tatcgatggc tttgttgtgt 4681 ttccgtgata tatgtaaacg cgtcaagtat tctctctctg tgtgtggtgc gtcctttagt 4741 cgttgaatcc attgagtgag acctcccctc gccgcccccc agaccccacc cccaaaaaag 4801 tcttctaact ccaagctcca tctaaactcc tcccatcaac aaaacgaaca aaggggcggg 4861 gcgggggcgc caacgacaac gcacaaaaaa tataaaaaac aaaaaatata aaaaccaaga 4921 tatagatgaa ggcatgggga gatatctaaa atctagtacg aagatggtta aataaaattt 4981 actgtgtatc tgtgtatgtt ataaatgtaa ttgtaattgt atgttaaaaa taatgcgcga 5041 tcagcaaaca aatttccata taaacacaat agcgataatg ctagatatat aatatatatt 5101 taaataccac taaatgtctg tgtgtctaga ataggagaaa gtatgtagta gaggacgaag 5161 aggaggagga ggaggctttt gggagaaagg acaaccgaaa aaacaaaaac aaaacaaccc 5221 ataagaacaa ccgagcaaaa tctaattttc gagctaaact aaatgtgcat ctcagtgtgt 5281 gtgtctgtat atgtatgttt gtcatccaac tagatataca ctatataatt atatagctac 5341 catataagca aaaaatgata attactacga aacggcaaag gaaatctccc ataaaaaata 5401 tgaaaaaaaa aaccaagaaa aacgaagaaa ataaaactca aatttccccc cacactcgaa 5461 tctccactga ttgtctaatt gatatttgca ttagccaggc atataatcct taatgtaata 5521 ctctctctat ctgtctctct gaaaaacgaa aacgataacg aaaaaaacca aaatgtgtgt 5581 gtgtactgta tcaaattagc gaaacaacaa attatacaat ttctacccat gtacgcatat 5641 attttaacta aacaaaaaag aaagcgagga tcagatcaga tattcagaaa taaacaaaag 5701 gtaaggcagc agaaaataat aatatttgac aacaggcaga ggcaaataag taaaaaattg 5761 tagacaacat acgcctaagt gttattcctt gtaattgagc attaattttt tatataaaac 5821 cgaaacttaa ttatgtaatt gtgtgtatct tgtgtctgaa acggacctca aacttaaagg 5881 aagtaaaaaa taacgcgatt tctgttgcca acaaaaaaca gaaggcagaa aaataagcac 5941 tcaaagtaaa attaaaacaa aaaaaaaaag ataaaaacca ataacgagag aaaaagaaaa 6001 gaaaaactta accattatat agtataattt gtatagatgt gtgtctattg cattatttgt 6061 acacgtacat atatataccg tctatatatt accgtatata tgtgtatgca tttatttata 6121 tacgctaaac tgaaaagaaa aaaagaaaaa ccaagcaaat atgtctaaac gaaacgaaca 6181 aaaaaatgca aaacaaaacg aacaaaaaaa ttgtaattga cgtgatgtgt aatgatattt 6241 ttaaaagcaa attttatgcc acgcccatgc caagcagcca cgcccccttt ttaacaaaaa 6301 gggcgatttc ccccccctct tcccgcgcgg aacgcagcca ctttcccccc gtcccgctcg 6361 cccagtaatt ccaaatctca ctcccacgct ctccagatca cggatcccat ggatccatac 6421 ataaatcctc caggtcagag atggtcagtt gctcctggac tccatccaat gggctggtag 6481 cgatgtggag gcgcctcaac caagagacga gagagaaaat aatacgaaat caaatcaaag 6541 aaaaacaaaa ataaatttgt gggcattttc caaatatttg tgaagca