Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218532 7134 bp mRNA linear INV 09-DEC-2024 (RhoGAPp190), transcript variant X3, mRNA. ACCESSION XM_070218532 VERSION XM_070218532.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7134 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7134 /gene="RhoGAPp190" /note="Rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056706" CDS 27..4790 /gene="RhoGAPp190" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X3" /protein_id="XP_070074633.1" /db_xref="GeneID:108056706" /translation="MRQFNISVIGLSGTEKDRGQVGVGKSCLCNRFMRPMADDYFIDH ISVLSQSDFSGRIVNNDHFLYWGDVRKTTEEGVEYQFNIIEQTEFMDDSTFQAFKVGK MDPYSKRCTATKVFSAEKLMYICKNQLGIEKEYEQKVMPDGRLSIDGFVVVFDVSPVP NRSVEKQVEFVQNVIATILKNKKPLVLVTTKNDDAYELYVREAEKISQRKDYKSTVQL IETSAHESINIDLAFLLLAQMIDKVKNRVKIISYQESAKSRKELLDTRSEAVTRLIRN QITDYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLHQYL DKFALALEYLLPDIGALNISDDDAWECARNYLQNHIEFEQYFFECPQASWTELVDMDE AEDEARIPFDVLETSEAETVFRNYLNSVQQDKKKIGWKQQFKMLLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDDIIEKSKQNFVELLLEHAQYFLQFKNVDN ITQEDVRQITDVIQEDSRYKMLDRLDQERRLMLVQHLRFIHCPIRDHCPFFYNCVDSL IEEVLSDKSASNHKTPSNVGGWKTSGSGSDRTLNLLIVGSEHLASDLLNDIRICTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNQQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGMRLSEMLHCDFIDHTQNHQKYVYDI LNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVAESTLVKANE HSIIIDVFIGDAKRRVEFILSSYHGTSQYRDELIHGYIYFYSAKRRSSLANLSILAAQ NANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFY NPFLKTAWDNKYEVENLHVEESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTD GSGSENYEMAPTRSLNSLNEERDISLDEIYDDNEKPKHLHQTDVSGSKDSLATHDAEW LEDKSDGRRNMNKNSIWNNFSGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKVGEAPSR NCPAMSSSTFTLPTQQPGKLNMKNFQLVSDAVAKMNFTGSGSGSGSGSGSGSTGLGLG LGTGGSGSMADSYLEPCDKDGKRYDHAQLDGEDEDSEELAEYEQIYENEDCTESDSCA SSTERRVRQQNAYYKANSKKPVAAKKQKKKKVAIPVQTPRVPPFGSYVSPPEIPLHYQ RMVVGGGGGGGGGPGEKKKPEPCVPDFMKSDKSPEYSMVPELAAAGIFGAENIPEYSA KCLKEYEKLEKLEKRRIKEETARLRKLQEKEKEQEKKLKRKLKQNSKGLVESAEAQFG KLMISSEQGEIPIFLNKCVEFIEKEGLDSEGIYRVPGSRAHVDMLFQRFEDDTNTEID ALDIPVNAVATALKDFFSKRLPPLFSKDIIKELEEIAGSRGVGNSKLNVEVKTDRSCR LIALKSLLQKLPPINFAILKYIFQHFVHVSDNSKLNSMDSKNLAICWWPTLIPIDFTD MGHFEQLRPYLEDIVQTMIDQFPYLFCGKDAFVMV" misc_feature <468..740 /gene="RhoGAPp190" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 594..605 /gene="RhoGAPp190" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 690..698 /gene="RhoGAPp190" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 786..1025 /gene="RhoGAPp190" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1821..2273 /gene="RhoGAPp190" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cd22207" /db_xref="CDD:412064" misc_feature 4155..4757 /gene="RhoGAPp190" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an...; Region: RhoGAP_p190; cd04373" /db_xref="CDD:239838" misc_feature order(4260..4262,4374..4376,4386..4388,4632..4634, 4641..4646,4728..4730) /gene="RhoGAPp190" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239838" misc_feature 4260..4262 /gene="RhoGAPp190" /note="catalytic residue [active]" /db_xref="CDD:239838" polyA_site 7134 /gene="RhoGAPp190" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaaatacgaa aaccaggtac gtcaagatgc gtcagtttaa catctcggtc attggactat 61 ccgggaccga aaaggaccgc ggccaggtgg gcgtgggcaa gtcatgcctg tgcaacagat 121 tcatgcgccc aatggccgac gactacttca tcgatcacat atcagtgctc agccagagcg 181 acttcagtgg ccggatcgtg aacaacgacc actttctcta ctggggcgat gttcgcaaga 241 cgacggagga gggcgtcgag tatcagttca atatcatcga gcagaccgaa ttcatggacg 301 actccacctt ccaggccttt aaggtgggca agatggatcc gtactccaag cgttgcacag 361 ccaccaaggt cttttcggcg gagaaactaa tgtatatatg caagaatcag ttgggcatcg 421 agaaggagta cgaacagaag gtgatgcccg atggccggct gagtatcgat ggctttgtcg 481 tcgtcttcga tgtgagtccc gtgcccaatc gcagtgtgga gaagcaggtg gaatttgtgc 541 agaacgtcat agccaccata ttgaagaaca agaagccgct ggtgctggtg accacgaaga 601 acgacgacgc ctacgagctg tacgtacgcg aggcggagaa gattagccag cgcaaggact 661 acaagagcac cgttcagctg atcgagacat cggcccacga gagcatcaac atcgatttgg 721 ccttcctcct gctcgcccag atgatcgaca aggttaagaa ccgggtcaag atcatctcgt 781 accaggagtc ggccaagtcg cgcaaggagc tactggacac gcgttccgag gcggttacgc 841 gactcattcg caaccagatc accgactatc atgtgctgtg gtcgcagggc tccaagatgc 901 tgtcgcagta tcgcgaatgg aacgagttcc tcaacatctt tggccacgag gcaggccaga 961 agctctttcg gcggcatatg aagaagctgc gcgacgatca tctcaacaag aagctgcatc 1021 agtatttgga caagttcgct ttggccctgg aatacctgct gccggatatc ggggctttga 1081 atatcagcga cgatgatgcg tgggagtgcg ccaggaatta tctgcagaat cacatcgaat 1141 tcgagcagta cttcttcgag tgcccgcagg cctcgtggac ggagctggtg gacatggacg 1201 aggcggagga cgaggcacgc attccgttcg atgtgctcga gacctccgag gcggagacag 1261 tcttccgtaa ttacttgaat tcggtgcagc aggacaagaa gaagattgga tggaagcagc 1321 aattcaagat gctgctcgag gagtccggct ttgtgacgcc cggcaagcaa ttgtccgagg 1381 tgcgagtcct tttcatgggc cgcgaatgct tcgaggctct gtcggagcac gactgccagc 1441 agatctacga catccaccag gacgacatca tcgagaagag caagcagaac tttgtggagc 1501 tactgctgga gcatgcccag tactttctgc agttcaagaa cgtggacaat atcacgcagg 1561 aggatgtccg ccagatcacg gatgtcatac aggaggattc gcgctacaag atgttggatc 1621 gtttggacca ggagcggcgg ctgatgctcg tccagcattt gcgcttcatc cactgcccca 1681 tccgggatca ctgccccttt ttctacaact gtgtcgatag cctgatcgag gaggtgctgt 1741 ccgacaagtc ggccagcaat cacaagacgc ccagcaacgt cggcggttgg aagacatcgg 1801 gcagcggcag cgatcgcacg ctcaatctgc tgatcgttgg ctccgagcat ctggccagcg 1861 atctgctcaa cgacatacgc atctgcaccg ggagcaaggg cgagtacatc tacgagaacc 1921 agacgtatta tctcaactac cgaatcgcca acggcgacat ggaggccttc aaggccatcg 1981 atgtctattc gagtggtctc atttgcgtgt actccaacca gcaatccttt gagacgctca 2041 aggataactt ggagcgcacg ctgctctgca acttggagct ggaggataag ttcgagaacc 2101 tgcccatcgt gctcgtctac cagccgcagg atctcaagga gaacgaggtg gagtacttgc 2161 gcaacgaggg catgcgactg tcggagatgc tgcactgcga cttcatcgat catacgcaga 2221 atcaccagaa atatgtctac gacatactca acattgtcat cctgtcactg aagctgaccg 2281 agatgaagag ctacgagcca tatccctcca atcacaccga tctgcggatc ctgtgctgca 2341 tcttctgtgg cgatcagtac gatatcgaga acattgtgca gccgctggtc gccgaatcga 2401 cgctggtcaa ggccaacgag cactcgatca taatcgatgt cttcatcggc gacgccaagc 2461 ggcgggtcga gtttatcctg tcttcatatc acggcactag ccagtaccgc gatgagctaa 2521 tccatggcta catttacttt tactccgcca agcgtcgatc ttcgttggcg aatctaagca 2581 tcctggcagc ccagaatgcc aacattccat tgcagattat cgcggtgacc gagagcgggg 2641 gcgtaaatgc ctttttcaac agcgatattt gccagttttt gatcaccgag ggcaatgcgg 2701 tggccgatcg cttcaagggc agctttatga ccttctcggc ggatcagtat gtcaagtttg 2761 cgttctataa tccattcctg aagaccgcct gggacaacaa gtacgaggtg gagaacctgc 2821 atgtggagga gtcaattact ttggattcgg gcgagggcac gctggagaac tcggttaacc 2881 agatgccacg cccgccgccg cgccacgaga gctacatgct gtccaatacg ctgggaaccg 2941 atggttccgg cagtgagaac tacgaaatgg ctcctacccg atctctcaac tcattaaatg 3001 aagaaagaga tatatcatta gatgaaatct acgatgacaa cgaaaagccc aagcacctgc 3061 atcaaaccga tgtcagcggg tccaaggatt cactggccac ccatgatgca gagtggctgg 3121 aggataaaag cgacgggcgg cgcaacatga acaagaactc gatttggaac aactttagcg 3181 gatcgacaca tgcctacacc accggccggc ggcacattga ctccaatctg aacaagatcc 3241 gcccgaaggg acccagccaa acgctgaagg tgggcgaggc gcccagtcgc aattgcccgg 3301 cgatgagctc ctccaccttc accctgccca cccagcagcc gggcaagctg aatatgaaga 3361 atttccagct ggtcagcgat gcggtggcca agatgaattt caccggatcc ggttcgggat 3421 cgggatcagg ctcgggatcc ggtagcaccg gtttgggctt gggcctgggc accggcggca 3481 gtggcagcat ggcggactcg tatctggagc cctgcgacaa ggatggcaag cgatacgatc 3541 acgcccagtt ggatggcgag gatgaggatt ccgaggagct ggccgagtac gagcagatct 3601 acgaaaacga agactgcacc gaatccgaca gctgtgccag ttccacggag cgacgggtgc 3661 gccagcagaa cgcctactac aaggccaaca gcaagaagcc ggtggccgcc aagaagcaga 3721 agaagaagaa ggtggccatt ccggtgcaga cgccgcgtgt tcctccgttc ggctcatatg 3781 tgagtccgcc ggaaattccg ctgcactacc agcgaatggt cgttggcggc gggggcggag 3841 gcggcggcgg gccaggtgag aaaaagaaac ccgaaccttg cgttcccgat ttcatgaaga 3901 gcgacaaatc gcctgagtat tccatggtgc cagagctggc ggctgctggg atcttcggtg 3961 cggagaatat acccgaatat agcgccaagt gcttgaagga atacgagaag ttggagaagc 4021 tagagaagcg gcgcatcaag gaggagacgg ccaggttgcg caagctccag gagaaggaga 4081 aggagcagga gaagaagctc aagcgcaagc tgaagcaaaa ctccaagggt ctcgttgaat 4141 cggcggaggc gcagtttggc aagctgatga ttagctccga gcagggtgag atccccattt 4201 tcctcaacaa gtgcgtggaa tttatcgaga aggagggcct ggattccgag ggcatttatc 4261 gagtgcccgg cagcagggcg catgtcgaca tgctattcca acgattcgaa gatgatacca 4321 acaccgagat tgatgcgctg gacattcccg ttaacgcagt ggccacggca ctcaaggact 4381 ttttctccaa gcgcctgccg ccgctgttca gcaaggatat catcaaggag ctggaggaga 4441 ttgccggttc ccgtggcgtg ggcaattcca aactgaatgt ggaggtcaaa acggaccgga 4501 gttgccgctt gatagcttta aaatcgctgc tccaaaagct gccgcccatc aactttgcca 4561 tactcaaata catattccag cactttgtgc acgtctcgga caactcgaag ctaaatagca 4621 tggacagcaa gaacctggcc atctgctggt ggcccacact cattcccatc gacttcaccg 4681 acatgggcca cttcgagcag ctgcgtccgt atctggagga cattgtccag acaatgatcg 4741 accagttccc gtatctgttc tgcggcaagg atgcttttgt catggtctag gcctagatcc 4801 ccgccagatc atggcgcact tggactttca cttgaccgcc ggacgcgaag ccaaaacgag 4861 atagttagat tcaatgtgcg agtgtatgaa tgtgggcgcc atccagtgcc atgtgtgctt 4921 tgtgttttct gggtgatcaa gatgtaagga gtaatagcca taggaaggaa agaaggaggg 4981 aagaaaggaa ggaaaggaag gttagcagga ggcagcccat cgatcgatcg attcattcaa 5041 atgaggatca gcagccaggc atatacatat ttataatagt atataatata tacttgggtc 5101 tattgtgtgc gatttgtgtg attgtgcgtg cgtgcgtgtg cgtatgtgag aacagaactt 5161 ggctaagtag ggtatattta ttttttatat atacaatata tattttgtat cgatggcttt 5221 gttgtgtttc cgtgatatat gtaaacgcgt caagtattct ctctctgtgt gtggtgcgtc 5281 ctttagtcgt tgaatccatt gagtgagacc tcccctcgcc gccccccaga ccccaccccc 5341 aaaaaagtct tctaactcca agctccatct aaactcctcc catcaacaaa acgaacaaag 5401 gggcggggcg ggggcgccaa cgacaacgca caaaaaatat aaaaaacaaa aaatataaaa 5461 accaagatat agatgaaggc atggggagat atctaaaatc tagtacgaag atggttaaat 5521 aaaatttact gtgtatctgt gtatgttata aatgtaattg taattgtatg ttaaaaataa 5581 tgcgcgatca gcaaacaaat ttccatataa acacaatagc gataatgcta gatatataat 5641 atatatttaa ataccactaa atgtctgtgt gtctagaata ggagaaagta tgtagtagag 5701 gacgaagagg aggaggagga ggcttttggg agaaaggaca accgaaaaaa caaaaacaaa 5761 acaacccata agaacaaccg agcaaaatct aattttcgag ctaaactaaa tgtgcatctc 5821 agtgtgtgtg tctgtatatg tatgtttgtc atccaactag atatacacta tataattata 5881 tagctaccat ataagcaaaa aatgataatt actacgaaac ggcaaaggaa atctcccata 5941 aaaaatatga aaaaaaaaac caagaaaaac gaagaaaata aaactcaaat ttccccccac 6001 actcgaatct ccactgattg tctaattgat atttgcatta gccaggcata taatccttaa 6061 tgtaatactc tctctatctg tctctctgaa aaacgaaaac gataacgaaa aaaaccaaaa 6121 tgtgtgtgtg tactgtatca aattagcgaa acaacaaatt atacaatttc tacccatgta 6181 cgcatatatt ttaactaaac aaaaaagaaa gcgaggatca gatcagatat tcagaaataa 6241 acaaaaggta aggcagcaga aaataataat atttgacaac aggcagaggc aaataagtaa 6301 aaaattgtag acaacatacg cctaagtgtt attccttgta attgagcatt aattttttat 6361 ataaaaccga aacttaatta tgtaattgtg tgtatcttgt gtctgaaacg gacctcaaac 6421 ttaaaggaag taaaaaataa cgcgatttct gttgccaaca aaaaacagaa ggcagaaaaa 6481 taagcactca aagtaaaatt aaaacaaaaa aaaaaagata aaaaccaata acgagagaaa 6541 aagaaaagaa aaacttaacc attatatagt ataatttgta tagatgtgtg tctattgcat 6601 tatttgtaca cgtacatata tataccgtct atatattacc gtatatatgt gtatgcattt 6661 atttatatac gctaaactga aaagaaaaaa agaaaaacca agcaaatatg tctaaacgaa 6721 acgaacaaaa aaatgcaaaa caaaacgaac aaaaaaattg taattgacgt gatgtgtaat 6781 gatattttta aaagcaaatt ttatgccacg cccatgccaa gcagccacgc ccccttttta 6841 acaaaaaggg cgatttcccc cccctcttcc cgcgcggaac gcagccactt tccccccgtc 6901 ccgctcgccc agtaattcca aatctcactc ccacgctctc cagatcacgg atcccatgga 6961 tccatacata aatcctccag gtcagagatg gtcagttgct cctggactcc atccaatggg 7021 ctggtagcga tgtggaggcg cctcaaccaa gagacgagag agaaaataat acgaaatcaa 7081 atcaaagaaa aacaaaaata aatttgtggg cattttccaa atatttgtga agca