Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218276 3171 bp mRNA linear INV 09-DEC-2024 FAK (Graf), transcript variant X6, mRNA. ACCESSION XM_070218276 VERSION XM_070218276.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3171 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3171 /gene="Graf" /note="GTPase regulator associated with FAK; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108056722" CDS 149..2680 /gene="Graf" /codon_start=1 /product="rho GTPase-activating protein Graf isoform X4" /protein_id="XP_070074377.1" /db_xref="GeneID:108056722" /translation="MHEREYIQESLSYVLRIQEVQERIKFEFVEILLAFISGWLVFYH TAHEQAEDHRDYLQDLRHKVQKTRENFEEAREKVTELKTKYMEKRTKPEEIFTKRGYL FLMEKSSILKISLLEPFKATWTKYYCTFKKQKREFTMLQFNQMNHNFTRPEARDDEKL TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRYWISAMDGTEPTYLAPG KIKVSEAYHLDEAGFMFIRRCIQVLEIRGLEDEGIYRKSGVGTKISKLLSLGLNQKET DDVFVDDKYRDLMESNTIASALKMYLRNLNEPLMTYQYHSDFIEAAKQETLNQRVNEV HKLVYKLPQPNFQMLDMVICHLTDVSRKYEKNKMSVFNLGVVFGPTLLRPREESVAAI LDIKFNNIVINILIDNYERIFKNKPSADVKLPVEAAKAPSIMYPARSSPPTRMPRASQ IGKAASTGAMGSTSSTAAAAAAAGNPMFLNQQKIYRVVSKSNCTEPTMSSSLQNIPNG DNYASGGAGCISLSPPMHMLNGILSPTIGSINNLHTISKNETTVGTTTAAGTRRYVPN DTAEVATDYGIIGANNGGVTLQSHHAIPVSSTTNFRHPEYLVTQSGSTNHLYTNSSSS VAGAAATSGNRISLNNVSPPNTAMRKERFLGSTGSGPQQHPPVQRGLHSYGQTKQQQQ QHYSPLMPTSTSSSNDSVCDSLSSNNGQHLGARNSNDYAMLTSQNSSLSPHLGHGSAC DEVVTATTVSCGGSANESSEYPPSKMHRNRDINQIKRDLSTGTARVRTLYACMGESEG ELSFEPNQIITNVRYSHEPGWLQGTLNGKTGLIPENYVEHLKPHH" misc_feature <149..319 /gene="Graf" /note="The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature; Region: BAR; cl12013" /db_xref="CDD:472257" misc_feature 437..790 /gene="Graf" /note="GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain; Region: BAR-PH_GRAF_family; cd01249" /db_xref="CDD:269953" misc_feature 767..1372 /gene="Graf" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(911..913,1043..1045,1055..1057,1262..1264, 1271..1276,1343..1345) /gene="Graf" /note="GTPase interaction site; other site" /db_xref="CDD:239839" misc_feature 911..913 /gene="Graf" /note="catalytic residue [active]" /db_xref="CDD:239839" misc_feature 2501..2662 /gene="Graf" /note="Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase and similar proteins; Region: SH3_GRAF-like; cd11882" /db_xref="CDD:212815" misc_feature order(2516..2518,2522..2524,2531..2533,2543..2545, 2600..2605,2642..2644,2648..2653) /gene="Graf" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212815" polyA_site 3171 /gene="Graf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acaaaactaa aactaattgt ttaaatgaag atatatattt tgtatacaac aatgccacaa 61 acaaaagatt gcgaatgcaa tttcttagga atttatataa ataaccgaac acaaaccgaa 121 tgtgggtcag gctgatgcta gcttgggcat gcacgaacgc gagtatatcc aggagtcgct 181 gagctatgtc ctgcggatac aggaagtgca ggaacgaatc aaattcgagt tcgtcgagat 241 actgctcgca tttatttctg gctggttggt gttctatcac acagcccacg aacaggcgga 301 agatcatcgc gactacctgc aggatttgag gcacaaggtg cagaagactc gcgaaaattt 361 cgaagaggct cgcgaaaagg ttactgagtt gaaaacaaag tacatggaaa aacgcacaaa 421 gcccgaggag attttcacaa agcggggcta cctattttta atggaaaaaa gttccattct 481 gaaaatctcc cttttagagc cattcaaagc gacgtggacg aaatactatt gtacattcaa 541 gaagcaaaag cgcgagttca cgatgctgca gttcaatcaa atgaatcaca atttcaccag 601 gccggaggca cgcgatgacg agaagctgac gctcttctcg tgccagcgaa gagcctcgga 661 gttcgagaag cgcttctgct tcgatttgac cttcaaggag aagccgggcg tcgtctatac 721 ctttcaggcg ctaagcgaaa aggatcatcg ctactggatt agcgctatgg atggcacgga 781 gccgacttat ctggcgcctg gtaaaatcaa agtcagcgag gcataccatc tggatgaggc 841 cggcttcatg ttcatccgcc gctgcattca agtattagag atccgtggtc tggaggacga 901 ggggatttac cggaagagcg gtgtgggtac caaaatcagc aagctgctct cgctgggcct 961 gaatcaaaag gaaaccgacg acgtcttcgt ggacgacaag taccgggatt taatggagag 1021 caacaccatt gccagtgccc tgaaaatgta tctgcgaaat ctaaatgagc ccttgatgac 1081 ctatcaatac cacagtgatt ttattgaggc agccaagcaa gaaaccctga atcaacgcgt 1141 gaacgaggtg cacaagctgg tctacaaatt gccacagcct aattttcaga tgctggacat 1201 ggttatttgc catttgacag acgtttcacg aaagtacgag aagaacaaga tgtccgtatt 1261 caatctgggc gtggttttcg gacccacttt gctgcgacct cgcgaggaat cggtggccgc 1321 catactggat attaaattca acaatatcgt cattaacatt ctgattgata actacgagcg 1381 gatcttcaag aacaagccca gcgccgatgt aaagctgcct gtggaggccg ccaaggcgcc 1441 gagcattatg tatcccgcac gcagcagtcc acccacgcga atgccgcgtg cctctcaaat 1501 aggaaaggcc gcttcgactg gtgccatggg cagtacgagc agcactgcgg cggcggcggc 1561 agcggcgggg aatccgatgt tcctcaatca gcagaagatc taccgcgtgg tcagcaaatc 1621 caattgtaca gagcccacca tgtcgtccag cctgcagaat attccgaatg gcgataacta 1681 tgcttcgggc ggtgccggct gcatttccct gtcgccgccc atgcatatgc tgaatggcat 1741 actctcgccg accatcggca gcatcaacaa tctgcacaca atatcgaaga acgagacgac 1801 ggtaggaacg acaacggcgg cgggcacacg gcgatacgtt cccaacgaca cggctgaggt 1861 cgcgaccgat tatggtatta taggtgccaa caatggcggc gtgacgctgc agtcgcatca 1921 tgccataccc gtcagcagca cgaccaattt ccggcatccc gagtacctag tgacccagtc 1981 ggggtcgact aatcacctat atacgaacag tagctctagt gtcgctggtg ccgccgctac 2041 ctcaggcaat cggattagtc tgaacaacgt ttccccgcca aatacagcga tgcgaaagga 2101 gagatttctc ggtagcaccg gcagcgggcc gcagcagcat ccgcccgtcc aacggggcct 2161 ccactcgtac ggccaaacga agcagcagca gcagcagcac tactcacccc tgatgcccac 2221 gtcaacgtcg agctccaacg acagcgtatg tgattcactt tcttccaata acggccagca 2281 tttgggcgca cgcaactcta atgattatgc catgctaacg tcacagaact catcgctgtc 2341 gccgcatctt ggacacggat ccgcctgcga tgaggtcgtc acggccacca ccgtcagctg 2401 cggcggctcc gccaacgaga gttccgagta tccgcccagc aaaatgcatc gtaatcgtga 2461 cattaaccaa ataaaacgtg atttgtcaac gggcacagct cgagtgcgca cactctatgc 2521 ttgcatgggc gagagcgagg gggagctttc gtttgagccc aatcaaataa taaccaatgt 2581 tcggtattcc cacgagcccg gctggttgca gggcacacta aatggaaaaa caggactcat 2641 tccggagaac tatgtggaac acttgaagcc ccaccattag attacgcttt ggttcggctt 2701 gggagttcga atgttccctc gtattttttg cattcgtcgt tagataaaat taaaaaaaaa 2761 acaaaaacaa aacaaaaaaa tgaaatatta ggaaatcgaa aaatgatcgt tgtgtaaaaa 2821 aaactaaaac taatttttga gtatgtgccc ttggggttgt tttacatgaa atgcatttta 2881 ttttatgctg gaaaccagga aaccacaatc ttaccttata actatgttaa cctttataat 2941 accatgacca tacaatgtac ttatttttaa ttatttaata aggagtataa actcagtgca 3001 actgcaaaga tttatttact aattgttacg ctcttcattt gttgcttatt tatacataat 3061 tcacgtaatt tgtgcaaaaa tgaattacat cgtatctaat atctactaca tatacaattg 3121 tataaaaata aatagcagtg cttcgaacac ttttaaaatg taaactttaa a