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LOCUS XM_044396108 6848 bp mRNA linear INV 09-DEC-2024 transcript variant X5, mRNA. ACCESSION XM_044396108 VERSION XM_044396108.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396108.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6848 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6848 /gene="Tlk" /note="Tousled-like kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054955" CDS 627..4481 /gene="Tlk" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X5" /protein_id="XP_044252043.1" /db_xref="GeneID:108054955" /translation="MCVQKNMRRLKKMSAGAQLQMAPQTTSALSHHHPNQQQQLQPPQ QQQAQPPPPQQQQHFANHHSAQQQSQQQQEQQNPQQAQQQQAQQQQILPQPHLQHLHK HPHQLQLHQQQQQLHQQQQHFHQQQQQSLQGLHQGSSNPDSNMSTGSSHSEKDVNDML SGGGAAPGVAAAAAIQQQHPAFAPALGMQQPPPPPPQHSNNGGEMGYLTAGTTTTASV TAVGKPRTPAERKRKRKMPQTSADEAGSGGGSGGAGAAVVNNSSLKGKSLAFRDMPKV NMSLNLGDRLGGSAGSGGGAGGAGSGGSGAGSGSGSGGGKSARIMLPVSDNKKINDYF NKQQTGVGVGVPGGGGAGGNTAGLRGSHTGGGSKSPSSAQQQQQTTQQQQQQASGVAT GGGAGGAAANQQVQVQTSSAYALYPPASPQTQTPQQQQQQQPGADFHYVNSSKAQQQQ QQQQQRQQQQTSNQMVPPHVVVGLGGHPLSLASIQQQQQTPLSQQQQQQQQQQQQQQQ QLGPPTTSTASVVSTHPHQLGSLGVVGMVGVGVGVGVNVGVGPPLPPPPPMAMPAAII TYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSDEQKCQIVGNQKTIDQHKSHIA KCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELS RRQEEITAEREEIDRQKKQLMKKRPAESGRKRNNNSNQNNQQQQQQQQHQQQQQQQNS NSNDSSQLTGGVVTGPGSDRLGGAAGGVSVDSGLGGNNAGAIGGGAVGGGVGGGGVGS GGVGGVGGGGGRGLSRSNSTQANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGGL GGNDSGSCSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLE RERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYVA CKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYC DGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNV CGEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVD VWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGC LAYRKEDRMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQA NSTGQTSFSAHMFGNMNQSSSS" misc_feature <2334..>2744 /gene="Tlk" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 3492..4295 /gene="Tlk" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(3501..3503,3540..3542,3546..3548,3654..3656, 3705..3716,3726..3728,3732..3734,3849..3851,3855..3857, 3861..3866,3870..3872,3912..3914,3921..3923,3990..4001) /gene="Tlk" /note="active site" /db_xref="CDD:270892" misc_feature order(3726..3728,3732..3734,3849..3851,3855..3857, 3861..3863,3921..3923,3990..4001) /gene="Tlk" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3909..3947,3960..4001) /gene="Tlk" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" polyA_site 6848 /gene="Tlk" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggcggcgtgt gtagtttgct ttcgctgttg tttttaaacg aacgcgcgcg cggaagttgc 61 gcacaaaatt atttatcaac caaaaagaca aaaacgagaa gaaactaaga ccccagcacc 121 aagtagagta aagagaggaa ggcccgagaa gaagcaatcg gataaatttt ttagtgtact 181 tctgcccgtt tctcgcttcg gtttcttttt ttcgttgccg tttttgcaaa aatgagcgaa 241 tagttccact cgctcttttg ctcgctctcc ctctcgccgc tctctgtctt cttcttcctc 301 ttggcttgct aactctctgt gtttgcacct tcttctttct ttcgctccgc tcgttaccat 361 tttacaaaca cacacgcgca cgatgagagc gactgcaaaa aaatcggaat aaacacagtt 421 ataatatatg tgtacaaata aacgatatat atatattttt atgtaaatat atgggagagc 481 accaaggcaa atgtgaaaat tagtgtaaac tacgggaaaa agctgaagaa aaaacggaaa 541 accaaatgtg ataatattgt aatagaatgt gaaaagccaa acacgcacac tcccatacac 601 acacacacgc gcgcccgcag ccacgtatgt gtgtgcagaa aaatatgcgg cgcttaaaaa 661 agatgtccgc cggcgcacag ttgcagatgg ccccgcagac cacttcggcc ctaagtcacc 721 accatcccaa tcagcagcag cagctgcagc cgccgcagca acagcaggca cagcccccgc 781 ctccgcaaca gcagcagcac tttgccaacc atcacagcgc ccagcagcag tcgcagcaac 841 agcaggagca acagaatccc cagcaggcgc aacagcagca ggcgcagcag cagcagatcc 901 tcccgcagcc gcatctgcag cacctgcaca agcatccgca ccagctgcaa ctgcaccagc 961 agcagcagca gctccaccag cagcagcaac acttccacca gcagcagcaa cagtcgctgc 1021 aggggctgca ccagggcagc agcaatccgg attcgaatat gagcactggc tcctcgcaca 1081 gcgagaagga tgtcaacgat atgctgagtg gcggcggagc agcgcccgga gtagctgccg 1141 cggcagccat tcaacagcaa catcccgcct ttgcgcccgc cctgggaatg cagcagccac 1201 cgccgccgcc gccgcagcac tccaataacg ggggcgagat gggctacttg acggcgggca 1261 cgaccacgac ggcctcggtg acggcggtgg gcaagcccag gacgccggcg gagcggaagc 1321 ggaagaggaa aatgccgcag accagtgcgg acgaggcggg gagtggcggt gggtccggcg 1381 gagctggagc agccgtggtg aacaacagca gcctgaaggg caaatccctg gcctttcgtg 1441 atatgcccaa ggtgaacatg agcctgaatc tgggcgatcg tctgggcggt tcggccggca 1501 gtggcggcgg agccggaggc gccggcagcg gagggagtgg cgccggttcc ggttccggca 1561 gtggcggcgg caagagtgcc cgcatcatgc tgcccgtcag cgacaacaag aagatcaacg 1621 actacttcaa caagcagcaa acgggcgtgg gcgtcggtgt gccaggtgga ggtggtgcgg 1681 gaggcaatac cgccggtctc cgaggatccc acacgggtgg cggcagcaag tcgccctcat 1741 ccgcccagca gcagcagcag acgacccaac agcagcagca gcaggcgagc ggagtggcga 1801 cgggcggtgg ggcaggagga gccgccgcca accagcaggt gcaggtgcag acgagcagcg 1861 cctacgccct gtatccacca gctagtcccc aaacgcagac gccgcagcaa cagcagcagc 1921 agcagccggg agccgacttc cactacgtca actccagcaa ggcgcagcag cagcagcaac 1981 agcagcagca gcgccagcag caacagactt ccaatcaaat ggttcctcca cacgtggtcg 2041 tcggcctggg tggtcatccc ctgagcctcg cgtccatcca gcagcagcag cagacgcccc 2101 tctcccagca gcagcagcag cagcagcaac aacagcagca gcaacagcag caactgggac 2161 cgccgaccac atcgacggcc tctgtcgtgt ccacgcatcc gcaccagctc ggctccctgg 2221 gagttgtggg catggtcggt gtgggcgtcg gcgttggggt aaatgtgggc gtgggaccgc 2281 cactgcctcc gccaccgccg atggcgatgc cggcggccat tatcacatac agcaaggcca 2341 cccaaacgga ggtctcgctg cacgagctgc aggaacgcga ggcggagcac gagtcgggca 2401 aggtgaagct ggacgagatg acgcggctgt ccgacgagca aaagtgccag attgtcggca 2461 accagaagac gatcgaccag cacaagtcgc acattgccaa gtgcattgat gtggtcaaga 2521 agctgctgaa ggaaaagagc agcatcgaga agaaggaggc gcgacagaag tgcatgcaga 2581 accgcctgag actcggccag tttgtgaccc agcgagtggg cgccacattc caggagaact 2641 ggacggacgg ctatgcgttc caggagctga gtcggcggca ggaggagata accgccgagc 2701 gcgaggagat cgaccggcag aagaagcagc tgatgaagaa gcgtccggcg gagtccggac 2761 gcaagcgcaa caacaacagc aaccagaaca accagcagca gcagcagcaa cagcagcacc 2821 aacagcagca gcagcagcag aattccaact cgaacgattc ctcgcagctg acgggcggcg 2881 ttgtcaccgg accgggcagc gatcgcctgg gcggcgcggc aggcggcgtt agcgtcgaca 2941 gcggattggg tggcaacaat gcgggcgcaa tcggtggcgg agctgtgggc ggtggcgttg 3001 gaggcggcgg cgtcggaagc ggcggcgttg gcggtgtcgg cggcggcgga ggacgtggtc 3061 tatcgcgcag caactcgacg caggccaatc aggctcaact gctgcacaat ggcggcggcg 3121 gatcgggggg caatgtgggc aactcgggcg gcgtcggcga tcgactgtcg gatcgaggag 3181 gaggcggcgg cctcgggggc aacgacagcg gcagctgctc ggactcgggc acgttcctca 3241 agccggatcc cgtttcgggg gcatataccg cgcaggagta ctacgagtac gatgagatcc 3301 tcaagctgcg ccagaatgcc ctcaagaagg aggacgccga cctgcagctg gagatggaga 3361 agctggagcg ggagcgcaat ctgcacatcc gagagctcaa gcggatactc aacgaggatc 3421 agtcccgctt caacaaccat cccgtgctga atgatcgcta ccttctgctg atgctgctgg 3481 gcaagggcgg cttctcagag gtccacaagg ccttcgacct caaggagcaa cgctatgtcg 3541 catgtaaggt gcaccaatta aacaaggatt ggaaggagga taagaaagct aattatatca 3601 aacacgcttt gcgggaatac aacatccaca aggcgctgga tcatccgcgg gtcgtcaagc 3661 tctacgacgt cttcgagatc gatgcgaatt ccttttgcac agtgctcgaa tactgtgatg 3721 gccacgatct ggacttctat ttgaagcaac ataagactat acccgagcgt gaagcgcgct 3781 cgataataat gcaggttgta tctgcactca agtatctaaa tgagattaag cctccagtta 3841 tccactacga tctgaagccc ggcaacattc tgctcaccga gggcaatgtc tgcggcgaga 3901 tcaagatcac cgactttggt ctgtcgaagg tgatggacga cgagaactac aatcccgatc 3961 acggcatgga tctgacctcc cagggagccg gcacttattg gtatctgcca cccgagtgct 4021 ttgtggtggg caaaaatccg cccaagatct cctccaaggt ggacgtgtgg agtgtgggcg 4081 tgatctttta ccagtgtctg tacggcaaga agcccttcgg tcataaccaa tcgcaggcca 4141 cgattctcga ggagaacacg atcctgaagg ccaccgaagt gcagttctcc aacaagccaa 4201 ccgtttccaa tgaggcaaag agcttcattc ggggctgctt ggcatatcgc aaggaggatc 4261 gcatggatgt gttcgcgctg gccaggcacg agtacatcca gccgccgata ccgaagcacg 4321 gccgaggctc gctcaaccag cagcagcagg cgcagcaaca gcagcagcaa caacagcagc 4381 agcagcagca acagtcgtcg acgtcgcagg ccaattccac cggccagact tcgttctctg 4441 cccacatgtt tggcaatatg aatcagtcga gttcgtccta gctgccaacc aagcgtaatt 4501 ccaactcata attcgccgcc gccgcagtag cagcagcaac ttcagctgcc agccaacagc 4561 aacaccaaca gcagcagcag cagcaacatc agcagcagca tcttcaactc cagcaatacc 4621 agccgaatca gcagctccat ttgcaaaaca gtagcagcaa ctatgcggcc acgcttctcg 4681 atgcagcggc cttttgctac gaaaccgtga tggatgcagc ccacttccac aacaataaca 4741 acaacagcac catcatcaac aacaatatgc agacaatgcc ggcgaatgct gtcaatgctg 4801 ctgctgccgg aggaggagga gcaggaggag cagcaggagg agggggaaca ccgacctacc 4861 aagggaaata caagcgctgg cagcagcaac agttgcaaca gcaggcgcaa ctgcaacagc 4921 agcaacacaa gctactgctg caacaagagc tgctgtagag taagaaaaaa aatacaaggg 4981 tgatgatgat ttacgacgga ataatgacaa gggagtttga gagaaggagg agagctgcct 5041 gcaacactgc cgccaagcca agctaatgtt gctgctgcaa cagcaacacc gtcagcaaca 5101 acaacaacaa cagtaacaac accccaagaa tttccgcagc gagtcgcaaa acaacaacaa 5161 aaacttaaat taatgaaact atatataaat atatatatgc atatatatat taaatgtgat 5221 aaacaagcgt aaagcaaaaa aaaaaataca aaacaagaaa ggaaagcagc aaatacagca 5281 ggagaaagac gaacaaccaa gggggaaaaa cccggaagat agggaaaagc aaagctgcag 5341 caaaaaacca gaagagaaga gcatagaaag agggagcaga agaaaagcag aaagttgaaa 5401 gctgagatga attgccgagg agaaagcttg agaaattgtt tataaaggct gctataaaca 5461 cacacttttt tttttttgtt aactataaat accaagcaga ataattaatc taaaataaat 5521 aataattaaa tgctaaatgt aaattagtaa gtagggtggc atctaaaaac aagagaagaa 5581 cgcaaagaac acgattccca agaacgcgaa aaggcacata atattttttc tttgtattaa 5641 aaataataat ggtaccataa agaaaacgta gcaaattagc gtaggctaaa tagcacagta 5701 taaaaactga aactaaaaaa acagtaaaag cagcagaaaa atagaaatga ttgtaaacac 5761 gcagagcaga ggaaacattt gcaatgggaa attacaaatt gttgcattgt tttttgggtt 5821 atgtttgttt gtagttcaaa cattaaaata acactcatac acacaacaca acacaacaca 5881 gcacagcaca cagacactgc agactacttt tgccttacaa gaagtgaaaa aaacactaat 5941 tttaattgcc aatttccatt ttgtatacat gcatattcaa tattgtgtac tcgcatatat 6001 acacacatat atatatttat cattttctac ccgcgaatct ttctttttat ttttttaacg 6061 tatgcaccaa cgaacattta attttaacgc ttttaaacga agttaaaacc aacttatacc 6121 ctatcttaat tttgaaatgg aaaagaaatc attctttgtt tgttttgtat caaaatccaa 6181 aagaaattta atttaaaaat aaaattaaaa aataccatca atcacacacc gcacacacat 6241 atacatttgt atatactcgt atctgaacga caaacaaaaa accgaagcga taaaaactaa 6301 aaacttaatc aaacgaaatg caattccaaa atatccaaga gaaaaagaat cagataacca 6361 ttttttttat atgccacaag aaaaacgcta agaacatgag aaacggcgag aaaaatcgat 6421 ggaaggggaa aagctagaga tcaggttctc agatcggatc agaaaatcgg cagaaaaata 6481 aacccatttg aagtaatcta cttctaatta catagtaaac taatgtaata gtttttatta 6541 aatatatata tatatatgta tcgatatata tatacataca tgtttttttt ttaattttaa 6601 aactatattt gtaatgcact atgcgtaaca ttgtattaaa tattaatatc caaggcatat 6661 taatagaaat atatatataa acataaaaaa ccagaaaaaa gaacatgaac taccaaccta 6721 aatgtttcaa taatatatag atctatatgt atgtaaaacc gatatgaaat ctgcctaatg 6781 ccagacaaaa aaaaacccta caagagaaag ttgaaagctc cgaagagtga aagagtgaaa 6841 gagatgga