PREDICTED: Drosophila obscura probable citrate synthase,
LOCUS XM_022370947 1893 bp mRNA linear INV 14-MAY-2021
mitochondrial (LOC111076900), transcript variant X2, mRNA.
ACCESSION XM_022370947
VERSION XM_022370947.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022370947.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1893
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1893
/gene="LOC111076900"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 13 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111076900"
CDS 148..1542
/gene="LOC111076900"
/codon_start=1
/product="probable citrate synthase, mitochondrial isoform
X2"
/protein_id="XP_022226639.1"
/db_xref="GeneID:111076900"
/translation="MSLYRISARKLVEAQKLPNVGSYVRLISADGRSLRDVLNAKVPE
EQERVKNFRKQHGATKLGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPEC
QKVLPAAPGGTEPLPEGLFWLLLTGEVPSQAQVQQLSREWAERAALPQHVVTMLNNMP
TSLHPMSQLAAAVTALNHDSKFAKAYSEGVHKSKYWEYVYEDSMDLIAKLPVVAATIY
CNTYRGGKGSRSIDSSLDWSANFVKMLGYDNAQFTELMRLYLTIHSDHEGGNVSAHTV
HLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLVWLRKLQKEAGNNPSEEQLKEYIW
KTLKSGQVVPGYGHAVLRKTDPRYTCQREFALKHLPEDELFQLVSKIYKVVPPILTET
GKVKNPWPNVDAHSGVLLQYFGMKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERP
KSYSTDLLVKMVQK"
misc_feature 247..1530
/gene="LOC111076900"
/note="Saccharomyces cerevisiae (Sc) citrate synthases
Cit1-2_like. Citrate synthases (CS) catalyzes the
condensation of acetyl coenzyme A (AcCoA) with
oxaloacetate (OAA) to form citrate and coenzyme A (CoA),
the first step in the citric acid cycle (TCA or...;
Region: ScCit1-2_like; cd06105"
/db_xref="CDD:99858"
misc_feature order(361..366,373..393,646..648,658..660,667..669,
943..945,958..960,967..972,979..984,991..999,1009..1011,
1030..1035,1042..1050,1192..1194,1483..1509)
/gene="LOC111076900"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:99858"
misc_feature order(367..369,943..945,955..957,1045..1056,1060..1062,
1069..1071,1171..1194,1201..1203,1216..1218,1339..1341,
1348..1350,1354..1356,1420..1422,1432..1434,1483..1485,
1492..1494)
/gene="LOC111076900"
/note="active site"
/db_xref="CDD:99858"
misc_feature order(367..369,1045..1053,1060..1062,1069..1071,
1171..1194,1201..1203,1339..1341,1348..1350,1354..1356,
1483..1485)
/gene="LOC111076900"
/note="coenzyme A binding site [chemical binding]; other
site"
/db_xref="CDD:99858"
misc_feature order(367..369,943..945,955..957,1048..1053,1171..1176,
1180..1194,1216..1218,1348..1350,1432..1434)
/gene="LOC111076900"
/note="citrylCoA binding site [chemical binding]; other
site"
/db_xref="CDD:99858"
misc_feature order(943..945,955..957,1051..1056,1189..1194,1216..1218,
1354..1356,1420..1422,1432..1434,1492..1494)
/gene="LOC111076900"
/note="oxalacetate/citrate binding site [chemical
binding]; other site"
/db_xref="CDD:99858"
misc_feature order(1051..1053,1189..1191,1354..1356)
/gene="LOC111076900"
/note="catalytic triad [active]"
/db_xref="CDD:99858"
ORIGIN
1 gctggtggtg ctgccaacct agaccagacc ggagcagacg cgaatgaagc gacattgctt
61 ggcgggccat ttcagttgcc ccgcggctga agggagagaa gcaccaaaaa gcaacagcat
121 tcttcataca taaccgttga attgatcatg tcgctctatc gcatttccgc acgtaaattg
181 gtcgaggcac agaaacttcc caatgttggg tcatatgtgc gcctgatctc ggccgatgga
241 cgcagcctgc gcgacgtact gaacgccaag gtgcccgagg agcaggagcg cgtgaagaac
301 ttccgcaagc agcatggcgc gaccaagctg ggtgagacca ccatcgatat gatgtacggc
361 ggtatgcgcg gcatcaaggc cctggtaacg gagacctccg tgctggacgc cgatgagggt
421 atccgcttcc gcggcctctc catccccgag tgccagaagg tgctgcccgc tgcccccggt
481 ggcactgagc ccctgcccga gggtctcttc tggctgctgt tgaccggcga ggtgcccagc
541 caggcccagg tgcagcagct ctcccgcgag tgggccgagc gcgctgccct gccccagcat
601 gtggtcacca tgctgaacaa catgcccacc agcctgcatc ccatgtcgca gctggccgcc
661 gccgttacgg ccctcaatca cgacagcaag ttcgccaagg catactctga gggtgtgcac
721 aagagcaagt actgggagta tgtctacgag gacagcatgg acctgatcgc caagctgcca
781 gtggtggccg ccaccatcta ctgcaacacg tatcgcggcg gcaagggctc ccgctcgatc
841 gactcgagcc tcgattggtc cgccaacttt gtgaagatgc tcggctacga caatgcccag
901 ttcaccgaac tgatgcgtct ctatctgacc atccacagcg atcacgaggg tggcaatgtc
961 tctgcccata ccgtgcattt ggttggatcc gctctgagcg atccctatct gtcgtttgcc
1021 gccggcatga acggtctcgc cggtccactg cacggcctgg ccaaccagga ggtgctcgtc
1081 tggctgcgca agctccagaa ggaggctggc aacaatccat ccgaggagca gctgaaggag
1141 tacatctgga agacactcaa gtctggacag gttgtgcccg gctatggaca tgccgtgctc
1201 cgtaagaccg atccccgcta cacctgccag cgcgagtttg ccctgaagca tttgccggag
1261 gatgagctct tccagctggt gtcgaagatc tacaaggtgg tgccaccaat cctgaccgag
1321 accggcaagg tgaagaaccc ctggcccaat gtagatgctc actccggtgt cctgctgcag
1381 tacttcggca tgaaggagat gaactactac accgttctgt ttggcgtctc gcgtgccctt
1441 ggcgtgctcg cttccctcgt ctgggatcgt gcccttggac tgcccatcga gcgtcccaag
1501 tcatactcca ccgatcttct ggtcaagatg gtccagaagt aaatggtggt cgacgatggc
1561 gcggcgcaga tggggtgatg cagggagatt ggagggaaat ttttagacgc aggtgcggtc
1621 gcagaagatg aattattcgt cttcgcggca gtagccaagt aataaacgag agagagggaa
1681 gagtgagtga gggaagagaa acgagacgta atgaaaatga aatgacgatt gaatgtgtag
1741 tagaaacaac aaccaaatac gaaccaacag ctaaataaca acaaaactgc taagaaaaca
1801 aacaacaaat ggaagagcaa aaacaataag ttggaaataa ggcagaaaac ttatttttaa
1861 attagtaaaa taattacact cagcaaaaca aaa