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LOCUS XM_022370945 1920 bp mRNA linear INV 14-MAY-2021 mitochondrial (LOC111076900), transcript variant X1, mRNA. ACCESSION XM_022370945 VERSION XM_022370945.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022370945.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1920 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..1920 /gene="LOC111076900" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111076900" CDS 16..1569 /gene="LOC111076900" /codon_start=1 /product="probable citrate synthase, mitochondrial isoform X1" /protein_id="XP_022226637.2" /db_xref="GeneID:111076900" /translation="MYFSRCLTPDVVLHLQCRTLAKKSVRDAKNLLREILRAPLEEEV QEKTVVQAVAKPQAARDGGPDSLQKLPNVGSYVRLISADGRSLRDVLNAKVPEEQERV KNFRKQHGATKLGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLP AAPGGTEPLPEGLFWLLLTGEVPSQAQVQQLSREWAERAALPQHVVTMLNNMPTSLHP MSQLAAAVTALNHDSKFAKAYSEGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCNTYR GGKGSRSIDSSLDWSANFVKMLGYDNAQFTELMRLYLTIHSDHEGGNVSAHTVHLVGS ALSDPYLSFAAGMNGLAGPLHGLANQEVLVWLRKLQKEAGNNPSEEQLKEYIWKTLKS GQVVPGYGHAVLRKTDPRYTCQREFALKHLPEDELFQLVSKIYKVVPPILTETGKVKN PWPNVDAHSGVLLQYFGMKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPKSYST DLLVKMVQK" misc_feature 274..1557 /gene="LOC111076900" /note="Saccharomyces cerevisiae (Sc) citrate synthases Cit1-2_like. Citrate synthases (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) with oxaloacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or...; Region: ScCit1-2_like; cd06105" /db_xref="CDD:99858" misc_feature order(388..393,400..420,673..675,685..687,694..696, 970..972,985..987,994..999,1006..1011,1018..1026, 1036..1038,1057..1062,1069..1077,1219..1221,1510..1536) /gene="LOC111076900" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99858" misc_feature order(394..396,970..972,982..984,1072..1083,1087..1089, 1096..1098,1198..1221,1228..1230,1243..1245,1366..1368, 1375..1377,1381..1383,1447..1449,1459..1461,1510..1512, 1519..1521) /gene="LOC111076900" /note="active site" /db_xref="CDD:99858" misc_feature order(394..396,1072..1080,1087..1089,1096..1098, 1198..1221,1228..1230,1366..1368,1375..1377,1381..1383, 1510..1512) /gene="LOC111076900" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99858" misc_feature order(394..396,970..972,982..984,1075..1080,1198..1203, 1207..1221,1243..1245,1375..1377,1459..1461) /gene="LOC111076900" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99858" misc_feature order(970..972,982..984,1078..1083,1216..1221,1243..1245, 1381..1383,1447..1449,1459..1461,1519..1521) /gene="LOC111076900" /note="oxalacetate/citrate binding site [chemical binding]; other site" /db_xref="CDD:99858" misc_feature order(1078..1080,1216..1218,1381..1383) /gene="LOC111076900" /note="catalytic triad [active]" /db_xref="CDD:99858" ORIGIN 1 agagaaaccc ttagaatgta cttttcccgg tgcttgactc cagacgttgt cctacaccta 61 caatgccgca cattggccaa gaaatcggtc cgggatgcca agaatttgct gcgcgaaatc 121 ttgcgtgccc ccctggaaga ggaggtgcaa gaaaagactg tcgtccaggc tgtggccaag 181 ccacaagcgg cacgggacgg agggcctgac tccctgcaga aacttcccaa tgttgggtca 241 tatgtgcgcc tgatctcggc cgatggacgc agcctgcgcg acgtactgaa cgccaaggtg 301 cccgaggagc aggagcgcgt gaagaacttc cgcaagcagc atggcgcgac caagctgggt 361 gagaccacca tcgatatgat gtacggcggt atgcgcggca tcaaggccct ggtaacggag 421 acctccgtgc tggacgccga tgagggtatc cgcttccgcg gcctctccat ccccgagtgc 481 cagaaggtgc tgcccgctgc ccccggtggc actgagcccc tgcccgaggg tctcttctgg 541 ctgctgttga ccggcgaggt gcccagccag gcccaggtgc agcagctctc ccgcgagtgg 601 gccgagcgcg ctgccctgcc ccagcatgtg gtcaccatgc tgaacaacat gcccaccagc 661 ctgcatccca tgtcgcagct ggccgccgcc gttacggccc tcaatcacga cagcaagttc 721 gccaaggcat actctgaggg tgtgcacaag agcaagtact gggagtatgt ctacgaggac 781 agcatggacc tgatcgccaa gctgccagtg gtggccgcca ccatctactg caacacgtat 841 cgcggcggca agggctcccg ctcgatcgac tcgagcctcg attggtccgc caactttgtg 901 aagatgctcg gctacgacaa tgcccagttc accgaactga tgcgtctcta tctgaccatc 961 cacagcgatc acgagggtgg caatgtctct gcccataccg tgcatttggt tggatccgct 1021 ctgagcgatc cctatctgtc gtttgccgcc ggcatgaacg gtctcgccgg tccactgcac 1081 ggcctggcca accaggaggt gctcgtctgg ctgcgcaagc tccagaagga ggctggcaac 1141 aatccatccg aggagcagct gaaggagtac atctggaaga cactcaagtc tggacaggtt 1201 gtgcccggct atggacatgc cgtgctccgt aagaccgatc cccgctacac ctgccagcgc 1261 gagtttgccc tgaagcattt gccggaggat gagctcttcc agctggtgtc gaagatctac 1321 aaggtggtgc caccaatcct gaccgagacc ggcaaggtga agaacccctg gcccaatgta 1381 gatgctcact ccggtgtcct gctgcagtac ttcggcatga aggagatgaa ctactacacc 1441 gttctgtttg gcgtctcgcg tgcccttggc gtgctcgctt ccctcgtctg ggatcgtgcc 1501 cttggactgc ccatcgagcg tcccaagtca tactccaccg atcttctggt caagatggtc 1561 cagaagtaaa tggtggtcga cgatggcgcg gcgcagatgg ggtgatgcag ggagattgga 1621 gggaaatttt tagacgcagg tgcggtcgca gaagatgaat tattcgtctt cgcggcagta 1681 gccaagtaat aaacgagaga gagggaagag tgagtgaggg aagagaaacg agacgtaatg 1741 aaaatgaaat gacgattgaa tgtgtagtag aaacaacaac caaatacgaa ccaacagcta 1801 aataacaaca aaactgctaa gaaaacaaac aacaaatgga agagcaaaaa caataagttg 1861 gaaataaggc agaaaactta tttttaaatt agtaaaataa ttacactcag caaaacaaaa