PREDICTED: Drosophila obscura protein kinase shaggy (LOC111072462),
LOCUS XM_022364358 3464 bp mRNA linear INV 14-MAY-2021
transcript variant X1, mRNA.
ACCESSION XM_022364358
VERSION XM_022364358.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364358.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3464
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..3464
/gene="LOC111072462"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 22 Proteins, and 99% coverage of
the annotated genomic feature by RNAseq alignments,
including 4 samples with support for all annotated
introns"
/db_xref="GeneID:111072462"
CDS 45..2636
/gene="LOC111072462"
/codon_start=1
/product="protein kinase shaggy isoform X1"
/protein_id="XP_022220050.2"
/db_xref="GeneID:111072462"
/translation="MAVPRVRKVVRVVRKKKRATGTGTGSSASINDASESDGGGAGAD
TATSSGAASGRQNSISIPISMDEIEAKAAAAASAAGASSSRPWTPMPPRKPPAKAAKI
KRRPSTGGGSGGGSASGNGSIVGAASAKGSAAASAAAEAEQRRQRKDKKRRSSSDSND
SDDNSSSSNSSSSSHSSSAASSSTSSSGESESEEGCSSSTEASSSASTSSPSDVRRRR
NAAANGKKKQKPLSAAAVAAASTCSSSLAALKKSTKSSSSASASTTSVGGKQYKDPSM
KQLIGKLNDLWPEHSVALSIPKEVDKSKEKLEGAWETTGRDGSKITTVVATPGQGTDR
VQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCN
IVKLLYFFYSSGEKRDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYMYQLF
RSLAYIHSLGICHRDIKPQNLLLDPETAVLKLCDFGSAKQLLHGEPNVSYICSRYYRA
PELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIR
EMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACAHPFF
DELRMEGNHTLPNGRDMPPLFNFTDHELSIQPSLVPQLLPKHLATRSSGGGPAAAGAV
SGSTSVSSTGSGASADGAAQAQVGGTAGSSAAGSGSGSGAAAAAAAAGGPATGSNAGG
QGNNSNPGSGAPSAVAAAPAAQQANAGGAAAAGGGGGGGGAAGAATAAGSVAATNAGG
ANVTGSQSNSALNSSSTANGNGSGNGEAAAGGGASGSAAGGDENGATAAAAAGAETEA
EAAAVSG"
misc_feature 1050..1925
/gene="LOC111072462"
/note="The catalytic domain of the Serine/Threonine
Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3;
cd14137"
/db_xref="CDD:271039"
misc_feature order(1080..1094,1104..1106,1143..1145,1149..1151,
1182..1184,1224..1226,1290..1301,1308..1310,1314..1319,
1437..1439,1443..1445,1449..1454,1458..1460,1494..1496,
1503..1505,1536..1538,1542..1553,1557..1559,1671..1673)
/gene="LOC111072462"
/note="active site"
/db_xref="CDD:271039"
misc_feature order(1080..1091,1104..1106,1143..1145,1149..1151,
1224..1226,1290..1301,1308..1310,1443..1445,1449..1454,
1458..1460,1494..1496)
/gene="LOC111072462"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:271039"
misc_feature order(1092..1097,1530..1556,1578..1583,1674..1688,
1692..1697,1707..1709,1767..1778)
/gene="LOC111072462"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:271039"
misc_feature order(1182..1184,1314..1316,1437..1439,1443..1445,
1503..1505,1536..1538,1542..1553,1557..1559,1671..1673)
/gene="LOC111072462"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:271039"
misc_feature order(1491..1523,1527..1559)
/gene="LOC111072462"
/note="activation loop (A-loop); other site"
/db_xref="CDD:271039"
misc_feature order(1578..1580,1683..1688,1692..1697,1704..1709,
1767..1784)
/gene="LOC111072462"
/note="axin binding site [polypeptide binding]; other
site"
/db_xref="CDD:271039"
ORIGIN
1 cgttgctact cggtctcaag gtggataggt cacaggtggt gcccatggcg gtgccgcgcg
61 tccgcaaagt ggtccgcgtg gtgcgaaaaa agaagcgagc gacgggcact gggacaggat
121 catcggcatc gatcaacgat gccagcgaat cggatggggg tggtgcgggc gctgatacgg
181 ctaccagctc gggtgcagcg tcgggcagac agaactccat ctccatacca atttcgatgg
241 atgagatcga ggcgaaagca gcagcagcag cctcggcggc gggagccagc agtagtcgac
301 cctggacacc gatgccgccc cgtaagccgc ccgctaaggc ggctaagatc aagcggcggc
361 cctcaactgg cggaggaagc ggaggcggga gtgcgagtgg caatggctcc attgttggcg
421 ccgcatctgc aaaaggctct gcggcagcgt cggcagctgc cgaggccgag cagcggcgcc
481 agcggaagga caagaagcgt cgctcctcga gtgattcgaa tgacagcgac gacaacagct
541 cctcgagcaa ctccagctcc agcagtcact cctcctctgc agcctcaagc tccacctcgt
601 cgtcaggcga gtcagagtcg gaggaggggt gctcctcttc caccgaagca tcctcctccg
661 cctccacctc gtcaccgtcg gatgtgcgac ggaggcgcaa tgctgccgcc aatggcaaga
721 aaaaacagaa accactttcg gcagcagctg ttgcggcggc ttccacctgc tcctcgtcgt
781 tggcggccct caagaagagc accaagagct catcctcggc cagcgccagc acgaccagtg
841 ttggtggcaa gcagtacaag gatccaagca tgaagcaatt gatcggaaaa ttgaatgatt
901 tgtggcccga gcacagcgtc gcattgtcca ttccaaagga ggtcgataag agcaaggaga
961 agctggaggg cgcttgggag acgacaggtc gcgatggttc caaaattaca acagttgttg
1021 caacacccgg ccagggcacc gatcgcgtac aagaggtctc ctacacagac acaaaggtca
1081 tcggcaatgg cagcttcggt gtggtattcc aggccaagct ctgcgacacc ggcgaactgg
1141 tggcaatcaa aaaagtttta caggacagac gatttaagaa tcgcgaattg caaataatgc
1201 ggaagctgga gcattgtaat attgtaaagc ttttgtactt tttctattcg agtggtgaaa
1261 agcgagatga agtatttttg aatttagtcc tcgaatatat accagaaacc gtatacaaag
1321 tggctcgcca atatgccaaa accaagcaaa cgataccaat caactttatt cggctctaca
1381 tgtatcaact gtttagaagt ttggcctaca tccattcgct gggcatttgc catcgtgata
1441 tcaagccaca gaatctactg ctcgatcccg aaacggccgt gctgaagctc tgtgactttg
1501 gcagcgccaa gcagctgcta cacggtgagc ccaatgtctc gtacatctgc tcccggtatt
1561 atcgcgcacc cgagctaata ttcggcgcca ttaattatac aacaaagatc gatgtgtgga
1621 gtgccggctg cgttctggcc gaactgctgc tgggccagcc aatcttccct ggcgactctg
1681 gtgtcgatca gctggtcgag gtcatcaagg tcctgggcac accgacaaga gaacaaatac
1741 gcgaaatgaa tccaaactat acggaattca agttcccaca aattaagagt catccatggc
1801 agaaagtttt ccgtatacgc actccgacag aagctatcaa cttggtgtcc ctgctgctcg
1861 agtacacgcc cagcgctcgg atcacaccgc tcaaggcctg tgcacatccg ttcttcgatg
1921 agctgcgcat ggaggggaac cacaccttgc ccaatggccg cgacatgccg ccgctattta
1981 acttcacaga tcacgagctc tcgatacagc ccagcttagt gccgcagttg ttgccaaagc
2041 atctggccac tcgctcctcg ggcggtggcc cagcagctgc cggtgccgta agcggctcca
2101 ccagcgtctc ctcaacgggc agcggcgcct ctgcggatgg tgccgcccag gctcaggtag
2161 gcgggacagc aggatcatca gcagccggtt ccggatcggg atcgggtgca gcagcagccg
2221 ctgcagccgc cggtggaccg gcgaccggct cgaatgccgg cggtcaagga aacaatagca
2281 atcccggctc cggtgcgccg tccgctgtgg cagctgcccc ggctgcccag caggcaaatg
2341 ccggcggagc tgcagccgcc ggcggtggtg gtggcggagg tggtgcggcg ggtgctgcca
2401 ctgcagccgg ctccgtagct gcgaccaatg ctggtggcgc caacgtgaca ggctcgcagt
2461 ctaacagcgc tctgaacagc agcagcacgg ccaatggcaa cggcagcgga aatggcgagg
2521 ctgcagcagg aggaggagct tccgggtccg ctgcaggtgg tgacgaaaat ggtgctacag
2581 cagcagcagc cgcaggagca gagaccgagg cagaagcagc agcagtgtcc ggttagcgca
2641 acagctgcgc tctgttaatg taaaatgctc tttctacagc gtactgtact gttattcgca
2701 tatgtatgtt ttattcgctc tcgctcgccc gctcgctctc agggttggag caggcctaag
2761 tttagttttt ttttccgcag cattcagcat aggtaacgga gcgtgatggc aaccaaagcc
2821 tcagccactc acacacacac aaccacactg acatacccac acatagccac acacacacat
2881 gtatgtatgt atatgtagct actatgtgca tggcaaaggc agaaattatt tagcataaaa
2941 accaaacata aaaaacacac acaccaaaaa gaaaccaaca agaaaatcaa ctttaaaact
3001 atgcataaat actaattacg agtataatat tgtattattg aacaaatcca aatattcaaa
3061 aatccctatc tataaaataa ccccagggga aatggaaaat gttacaaaaa gaggagcgaa
3121 agcacccgct cttctgcgtc ccagcccccc ctaatccatt ctccattccc ataccccccc
3181 catccacgta gagaacaaat ttaatggaaa atggcaaaaa aaaaaaaaaa caaaacaaaa
3241 ataaaaaaaa agctccaggt atcgtaatat acagacagac ggagtatctt aagcaaaagg
3301 cctacaagaa atgagaggaa taactcgtac ttagtgaaat aaatcaaaat tttttgtccc
3361 ctttaacgta ccatcatata cttacgagta tagtatatct atctatgcag atatctatca
3421 gatatagtta tagcatagca ctccaaaata gcaagtgaaa taca