PREDICTED: Drosophila obscura serine/threonine-protein kinase PAK
LOCUS XM_022364344 2342 bp mRNA linear INV 14-MAY-2021
mbt (LOC111072457), mRNA.
ACCESSION XM_022364344
VERSION XM_022364344.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364344.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 1% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..2342
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2342
/gene="LOC111072457"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 91% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111072457"
CDS 411..2342
/gene="LOC111072457"
/codon_start=1
/product="serine/threonine-protein kinase PAK mbt"
/protein_id="XP_022220036.2"
/db_xref="GeneID:111072457"
/translation="MFTKKKKKPLISMPSNFEHRVHTGFDKRENKYVGLPLQWASIVG
NNQILKSTNRPLPLVDPSEITPTEILDLKTIVRPHHNNNKADTTSLNSSSTMMMASVG
GPGGGSIPGTPGGVHGSMGMLGAGGQHHLMDPMTASGIVLPKTSHVARSNSLRSSSPP
RVRRVANVPPSVPEEESSSTAATTTTTPATGFKPQPPLGHPMLYSSQNAHVNGAATGP
LAVRTDQGANMQYRAMGGVGPPGAIPQQTSPVGSVASGTRSTHSHTNNGNSTGFPLYP
PASQAHQPKSVGVGDQNQNPLHSHAQTHPHPHQHPHNHAKSASRASSSSGGASSATLA
ASQASAQQQPKQDQRLTHEQFRAALQMVVSAGDPRENLDHFNKIGEGSTGTVCIATDK
STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYHHPNIVETYSSFLVNDELWVVMEYLE
GGALTDIVTHSRMDEEQIATVCKQCLKALAYLHSQGVIHRDIKSDSILLAADGRVKLS
DFGFCAQVSQELPKRKSLVGTPYWMSPEVISRLPYGPEVDIWSLGIMVIEMVDGEPPF
FNEPPLQAMRRIRDMQPPNLKNAHKVSPRLQSFLDRMLVRDPAQRATAAELLAHPFLR
QAGPPSLLVPLMRNARHHS"
misc_feature 435..572
/gene="LOC111072457"
/note="PAK (p21 activated kinase) Binding Domain (PBD),
binds Cdc42p- and/or Rho-like small GTPases; also known as
the Cdc42/Rac interactive binding (CRIB) motif; has been
shown to inhibit transcriptional activation and cell
transformation mediated by the...; Region: CRIB_PAK_like;
cd01093"
/db_xref="CDD:238526"
misc_feature order(441..443,450..452,459..461,465..467,474..476,
525..527,537..539)
/gene="LOC111072457"
/note="GTPase interaction site [polypeptide binding];
other site"
/db_xref="CDD:238526"
misc_feature 1500..2282
/gene="LOC111072457"
/note="Catalytic domain of the Serine/Threonine Kinase,
Group II p21-activated kinase; Region: STKc_PAK_II;
cd06648"
/db_xref="CDD:270815"
misc_feature order(1542..1556,1566..1568,1605..1607,1611..1613,
1698..1700,1746..1760,1764..1769,1776..1778,1881..1883,
1887..1898,1902..1904,1932..1937,1944..1946,1983..1997,
2001..2003,2082..2084,2109..2117)
/gene="LOC111072457"
/note="active site"
/db_xref="CDD:270815"
misc_feature order(1542..1556,1566..1568,1605..1607,1611..1613,
1698..1700,1746..1760,1764..1769,1776..1778,1893..1898,
1902..1904,1932..1937)
/gene="LOC111072457"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:270815"
misc_feature order(1551..1556,1638..1640,1881..1883,1887..1895,
1944..1946,1983..1997,2001..2003,2082..2084,2109..2117)
/gene="LOC111072457"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:270815"
misc_feature 1932..2003
/gene="LOC111072457"
/note="activation loop (A-loop); other site"
/db_xref="CDD:270815"
ORIGIN
1 atatattcaa gatctggcat catcgggaat taatttcatt tatttttttt gttgtttccc
61 caattgtgtt tgtgtttttc tatccgttaa cttgtgcgcc tccaagccgc aaaaaatgtg
121 ctgaccagtg ccttggggca gtcagagcca gagccatcga gaattccgaa attccgaatc
181 gcatccgctg cgccatgcgt gtgtgtaggt gattgcggtg gttgtgtgtg tgtgtttgtg
241 cgtctgcgag agagctggag agacattgtc gggtcgtcgg gcaaaagggc ggtaaaagaa
301 aagtcaacaa actgcaaggg gaacgggaaa gcgaacgcga acggggctac ggaacgagta
361 aaaactatta aacgccgtgc agtagcagca gcagctaatt tccctgcaaa atgttcacca
421 agaagaagaa gaaacctctg atctcgatgc ccagcaattt tgagcatcgc gtgcacacgg
481 gattcgataa gcgggagaac aaatatgtcg gcctcccact ccagtgggcc tccattgtgg
541 gcaacaatca gatcctcaag tccaccaatc ggcccctgcc cctggtcgat ccttccgaga
601 tcacgcccac agaaattctc gacctgaaaa cgattgtgcg gccccaccac aacaacaata
661 aggcggacac cacatcgcta aacagcagca gcaccatgat gatggcctcg gttgggggtc
721 ccggtggtgg ttcgattccg ggtactccag gcggagtgca cggctcgatg gggatgctgg
781 gtgctggcgg gcaacatcat ttgatggatc caatgactgc gtccggcatt gtcctaccca
841 agacctccca tgtggcgcgc tccaattcgc tgcggagctc gagtccgccg cgtgtgcgtc
901 gcgtggccaa tgtaccaccc tccgttcccg aggaggagtc gtcgtcgacg gcggcgacaa
961 caacaacaac gccagcgacg ggcttcaagc ctcagccgcc tctgggccat ccaatgctct
1021 attccagtca gaatgcgcac gtcaatggag cggccacagg tccgctggcc gtgcgaacgg
1081 atcagggcgc gaatatgcag taccgagcca tgggaggcgt cggaccgccg ggcgccatcc
1141 cgcaacagac atcgcctgtg ggctcggtgg ccagcggaac gcgatccacc cactcacaca
1201 cgaacaacgg aaacagtacc ggcttcccac tgtatccccc cgcttcacag gcgcaccagc
1261 caaagtccgt gggcgtgggc gaccagaatc agaatccctt gcatagccac gcccagacgc
1321 atccgcaccc acatcaacat ccacacaacc atgccaagtc ggcgtcccgt gcctccagct
1381 caagcggcgg ggccagcagt gccaccctgg ccgcttctca ggcgtccgcc cagcagcagc
1441 cgaagcagga tcagcgactg acccacgaac aatttcgggc cgccctccaa atggtcgtct
1501 ccgctggcga tccgcgcgag aatcttgatc atttcaacaa aatcggcgag ggatctacgg
1561 gcaccgtctg catagccacc gacaagtcca caggtcgcca ggtggccgtg aagaaaatgg
1621 acctgcgcaa gcagcaacga cgcgagctgc tcttcaacga ggtggtcatc atgcgggact
1681 accatcatcc aaatatcgtt gagacatact ccagctttct ggtcaacgac gagctctggg
1741 ttgttatgga gtatctggag ggcggcgccc tcaccgacat tgtcacccat tcgcgcatgg
1801 atgaggagca gattgccact gtctgcaagc agtgcttgaa ggctttggcc tatttgcact
1861 cacagggtgt catccatcga gacatcaagt cggactccat actactggcc gccgatggac
1921 gggtgaagct gtcggacttt ggattctgcg cccaggtgtc gcaggagctg cccaaacgca
1981 aatcgttggt gggcacaccc tactggatgt cgccggaggt gatttcacgc ctgccgtatg
2041 gtcccgaggt ggacatctgg tcgttgggta tcatggtcat tgaaatggtg gacggcgagc
2101 caccattctt caacgaaccg ccgctacagg cgatgcgtcg catccgggac atgcagccac
2161 cgaatctgaa gaatgcccac aaggtctcgc cacgtctgca atcgttcctc gatcggatgc
2221 tggtgcgtga cccggctcag cgggccaccg ccgccgagtt gctggcccat ccgttcctgc
2281 gccaggcggg gccgccctcg ctgctggtcc cactcatgcg caacgcgcga caccactcat
2341 ag