Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022364267 7057 bp mRNA linear INV 14-MAY-2021 (LOC111072420), mRNA. ACCESSION XM_022364267 VERSION XM_022364267.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364267.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-298 JAECWW010000165.1 1672671-1672968 299-512 JAECWW010000165.1 1673200-1673413 513-1616 JAECWW010000165.1 1673488-1674591 1617-1676 JAECWW010000165.1 1675411-1675470 1677-1786 JAECWW010000165.1 1675790-1675899 1787-2193 JAECWW010000165.1 1675901-1676307 2194-3159 JAECWW010000165.1 1676387-1677352 3160-5866 JAECWW010000165.1 1677421-1680127 5867-6055 JAECWW010000165.1 1680194-1680382 6056-6302 JAECWW010000165.1 1680457-1680703 6303-7057 JAECWW010000165.1 1680793-1681547 FEATURES Location/Qualifiers source 1..7057 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..7057 /gene="LOC111072420" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:111072420" CDS 203..6688 /gene="LOC111072420" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: phosphatidylinositol 4-kinase alpha" /protein_id="XP_022219959.2" /db_xref="GeneID:111072420" /translation="MTMTASDKYTYQRAVLCLARVLAGIQPTPWEKVQTLFRYCPQEN AAGVFCLDTRAQDAVIALGIYFLESGCQHESQIVPYLLRLAKCLPKAVWIDDARSSKI ERVRIPSAEKFSFCLNTLLSDIAAKCPDSREEIILNQVETLGALTNIVKSSRDSSSAP PPIILCKATVPLLFGLARSMGRYASNDPPLLCRIFPPELLPIQRVGGRDGTASSSASG TCGGSFSSSERLAATANHQFRPIIPRSMSGSLAAHQHHHQLYDDNRQRHLGYGFYSNA SNANNSKQKPSLNSYCSVPYDPRTHFFTRYGSSFNQFPNMRVCESPTKGGPRPLYRVP PFPIQHLQTIFAVSKKLLTKDTLEHLDEQASDIFSLHQIKGYCYKSFSETLNLVLVTL LRELLQHQVDLPTPFTKDVQEFVKRLFLNGQTELQNKQQDQERERREENGIAVVNKYK VNVMANAACVDLLVWAIRDETVDVDYTVPSLQNGLQFLLKKEADKLCGRLSQKLNLVL SHKIVMDHMPLLMVCLEGLGKLAQKFPNIAGTSISYLRDFLVDPSPILGKLHAHAMQS LALQKKEKELTPFKIVVQHSDSRAVVDILNDNQKHAAAAGGPGASGRSGHVAFEALRD AAIENLSIALRAAHTLDQFCVPALVANVSNRLFTAEKHESESNLVSLNIIVMLGHVAV ALKDTSKTTQNILQFFIQRFCKVPSEQNALIVDQLGCMIISQCETHVFDEIMKMFSRV TVQSASLAYTSDPEHRKQFHHVSDAVVNALGNIAANIQGDAEMLELLGKLLELFVQIG LDGERSYDNTPGAQKASSRAGNLGMLIPVIAVLVRRLPPIKNPRQRLHKLFKDFWAYC VVMGFTNARLWPADWYQGVQQIAAKSPLLISQTAHKSDMRELNYTLAIKSDSVNELRS QILMLLEHSSDNVATAINKLTFAQCTYLLSVYWLEMLRVENADEPSLEPIMSYLCDTA LQRDKTGIWQCVKCVADQVFEKFRNVLYAHDEIREKVLESQATLLLVYFNHIHKQIQL VADQYLSQLVDRFPHLLWNRRVLWCMLDILQLLAYSLTLDPNEETPTLRVVSTPYTLQ LMDSLPARELRLKDFADRCQGIVNEAMKWAPRSTRSHLQEYPNQIPTPVLAHHSGLAL AIDSVVNSSYLHPGNALGTLSKRPSCVNSDTPRFVSVLCLRSKYAGEISGLLSVLSEQ DKAGLAERLVSDVWEACRDKSDARHRGALWRATAYLIICAEVDRKLLHAVASSQLELF TESVMETAVECWQWVLTARQDLELCFIQEMVSAWQTTFEKRMGLFALEKEVTHPLAAF EGCKLVSSPILIAPHLIWLQLLSEMVDTAKYCNRDKVEMFCLLLHRCLPILKSSRQNR QVATVGCRFKLLQCGLSLLQGNTIPKSLARNILRERIYSNALDYFCGPPTCPIQSRDQ LLDDILILLKFWQTMRSEKKHLVTSEVGDYDMAAANASGSSNQMLGVKANPETASLIS GGPDYSMRSMSASGNVTGGSSGWYNTIPHSTSTLSKRSNRSKRLQYQKDSYDKDYMKK RNLILELLAVELEFLITWYNPNCLPDLIVPGEEQITEWRNRPYKANVWRDYARLAWCY NPSLAVFLPQRIKNAEIIDEEVSRLVCSDPIAVCHIPEALKYLCTTKNLLQESPDLVY ILSWSPVTPIQALSYFSRQYPSHPLTAQYAVKSLSSFPAESVLPYIPQLVQALRHDTM GYVVEFIKNISKRSQIVAHQLIWNMQTNMYMDEDQMHRDPNLYEALDLLSQNIIASFS GAAKRFYEREFDFFGKITAVSGEIRSFAKGIERKNACLAALSRIKVQSGCYLPSNPEA MVLDIDYSSGTPMQSAAKAPYLARFRVYRCGITELETRAMEVSNNPNSQEDAKITLGV ESWQAAIFKVGDDVRQDMLALQVITIFKNIFQQVGLDLFLFPYRVVATAPGCGVIECV PNAKSRDQLGRQTDSGLSEYFQHQYGDESSKEFQAARANFVKSMAAYSLIGYLLQIKD RHNGNIMIDKDGHIIHIDFGFMFESSPGGNIGFEPDMKLTDEMVMIMGGKMDSPAFKW FCELCVQAFLAVRPYQDAIVSLVSLMLDTGLPCFRGQTINLLKQRFVATKNNKEAAAH MLSVIRNSYQNFRTRTYDMIQYYQNQIPY" misc_feature 2057..4936 /gene="LOC111072420" /note="PI4-kinase N-terminal region; Region: PI4K_N; pfam19274" /db_xref="CDD:437106" misc_feature 5021..5548 /gene="LOC111072420" /note="Phosphoinositide 4-kinase(PI4K), accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases. Its role is unclear but it has been suggested to be involved in substrate presentation. PI4K phosphorylates hydroxylgroup at position 4 on the...; Region: PI4Ka; cd00871" /db_xref="CDD:238443" misc_feature 5729..6682 /gene="LOC111072420" /note="Catalytic domain of Type III Phosphoinositide 4-kinase alpha; Region: PI4Kc_III_alpha; cd05167" /db_xref="CDD:270711" misc_feature order(5765..5767,5771..5776,5780..5782,5786..5788, 5921..5923,5927..5929,5936..5938,6029..6031,6065..6076, 6089..6091,6098..6100,6263..6265,6269..6271,6299..6304) /gene="LOC111072420" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270711" misc_feature 6239..6265 /gene="LOC111072420" /note="catalytic loop [active]" /db_xref="CDD:270711" misc_feature order(6302..6334,6341..6352,6353..6370) /gene="LOC111072420" /note="activation loop (A-loop); other site" /db_xref="CDD:270711" ORIGIN 1 gatggtttga cacctctaat tgacaccaaa atattaattt aaaagccgat ttacgacgat 61 gataaacgct tagattgatt atttgaccca ctaaataatc tattgggtgg ttgatcatcg 121 aaaacgaacg tgccacgccc cttaaagaga aggaaaacag ccgtaaaagc atcaagagga 181 gtggaggaga cctggaggag agatgacgat gaccgcctcg gacaagtaca cgtaccagcg 241 ggcagtccta tgtctggccc gagtgctggc tgggatccag cccacgccgt gggagaaggt 301 gcagacattg ttccgttatt gcccgcagga gaatgccgcg ggcgtcttct gcctggacac 361 cagggcccag gatgcggtca ttgcgctggg catatacttt ctggagagtg gctgccagca 421 cgagtcacag atagtgccct atctgctgcg gctggccaag tgcctgccga aggcggtctg 481 gatcgatgat gcgaggagca gcaagatcga acgtgtgcgc atcccgtcgg ccgaaaagtt 541 cagcttctgc ctgaacaccc tgctgtcgga cattgccgcc aagtgcccgg attcgcgcga 601 ggagatcata ctcaatcagg tggagacgct gggcgctttg accaacattg tcaagtccag 661 cagggacagc agctcggcac cgccaccgat tatactttgc aaggccacgg tgccgctgct 721 atttggactg gcccgttcga tgggccgtta tgccagcaat gatccaccgc tgctgtgccg 781 catctttccg ccagagctgc tgcccatcca gcgggtgggt gggcgtgacg gcaccgccag 841 cagcagtgcc agcggcacct gtggcggctc ctttagcagc agcgagcgcc tggctgccac 901 tgccaaccat cagtttcgac cgataatacc ccgctcgatg tccggcagcc tggccgcgca 961 ccaacaccac caccagctct atgacgataa ccggcagcga cacctgggct atggcttcta 1021 cagtaacgcc agcaatgcca acaatagcaa gcagaagcca tccctgaaca gctattgctc 1081 ggtgccgtac gatccgcgga cgcacttctt cacgcgctac ggctccagct ttaatcagtt 1141 ccccaatatg cgggtatgcg aatcgccaac gaagggcggt cctcggcccc tgtatcgagt 1201 gccgccgttt cccatccagc atctgcagac gatattcgcg gtatccaaga agctgctgac 1261 caaggatacg ctggagcatc tggacgagca ggccagcgat atattctcgc tgcaccagat 1321 taagggatat tgctacaaga gcttctcgga gacactcaat ctggtgctgg tgacgttgct 1381 gcgcgagctg ttgcagcatc aggtggattt gcccacaccc ttcaccaagg atgtgcagga 1441 gtttgtgaag cggctcttcc tcaacggcca gacagagctg cagaataagc agcaggacca 1501 ggagcgtgag cggcgcgaag agaacggcat tgccgttgtc aacaaataca aggtcaatgt 1561 gatggccaat gccgcctgtg tggatctcct tgtctgggcc atacgcgatg agacggttga 1621 tgtcgactat acggtgccat ccctgcagaa tggcttgcaa tttttattga agaaagaggc 1681 ggacaaacta tgcggacggc tgtcacagaa gctgaatctc gtgctcagcc acaagatcgt 1741 gatggatcac atgcccctgc tgatggtctg cctggagggc ctgggcaagc tggcacagaa 1801 atttcccaat atagccggaa catcgatatc gtatttgcgt gactttctgg tggaccccag 1861 ccccatactg ggcaaactgc atgcccatgc catgcagtcg ttggcgctcc aaaagaagga 1921 gaaagagctg acgccattca agattgtggt gcagcattcg gattcgcgtg ctgtggtcga 1981 tattctaaac gataatcaga agcatgcggc tgcggctggg ggccccggcg ccagtggacg 2041 cagcgggcat gtggcctttg aggcgcttcg tgatgcagcc attgagaatc tatcgattgc 2101 gctgcgtgca gcacacacac tggatcagtt ttgtgtgccc gctttggtgg ccaatgtgtc 2161 caatcgtttg tttaccgccg agaagcatga aagcgaatca aatttggtta gcctgaatat 2221 catcgtgatg ctgggccatg tggccgttgc actgaaggac acctccaaga cgacacagaa 2281 catactgcag ttcttcattc agcgcttctg caaggtgcca tcggagcaga atgccctgat 2341 tgtcgaccag ctgggctgca tgatcatctc acagtgcgag acgcatgtct tcgatgagat 2401 catgaagatg ttctcccggg tgacagtgca atcggcctcg ctggcctaca cctcagatcc 2461 ggagcatcgc aagcagttcc atcatgtctc cgatgcggtg gtgaatgccc tgggaaatat 2521 tgctgccaat atacagggcg atgcggagat gctggagcta ttgggcaagc tgctggagct 2581 gttcgtgcag attggattgg atggtgagcg ctcctacgac aatacgccgg gtgcccagaa 2641 ggccagctca cgggctggta atctgggcat gctaataccg gtgattgcgg tactggtgcg 2701 tcgcctgccg ccaattaaga atccacgcca gcggctgcac aagctcttca aggacttttg 2761 ggcctactgt gtcgttatgg gctttaccaa tgcccgttta tggccagccg attggtatca 2821 gggtgtacag cagattgcgg ccaaatcgcc gctactcatc tcacaaacgg cccacaaatc 2881 ggatatgcgc gagctcaact atacgctggc cattaaaagc gattcagtga acgagctgcg 2941 cagccagata ctgatgctgc tcgagcactc atcggacaat gtggcgacgg ccatcaataa 3001 gctgacattt gcccagtgca catacctgct gagtgtctac tggctggaga tgctgcgcgt 3061 cgagaatgcc gatgagccca gtctggagcc cattatgagc tatctgtgtg acacggcact 3121 gcagcgggat aaaacgggca tctggcagtg tgttaaatgc gtcgccgatc aggtgtttga 3181 aaagtttcgc aatgttctgt acgcccacga tgagatacgt gagaaggtgc tcgagtcgca 3241 ggcaacgctg ctgcttgtct acttcaatca catacacaag caaatccaac tggtggccga 3301 tcagtatctg tcacagctgg tggatcgctt cccccacctg ctgtggaatc gtcgggtgct 3361 ctggtgcatg ctggacatac tgcagctgct ggcctactcg ctgaccctcg atccgaatga 3421 ggagacgccc acgctgcgtg tggtatccac accatatacg ctgcagctga tggactcgct 3481 gccggcgagg gagctgcggc tgaaggactt tgccgatcgc tgtcagggca ttgtgaatga 3541 ggcgatgaaa tgggcgccac gctcgacgcg ttcccacctg caggagtatc ccaatcagat 3601 acccacaccg gtgctggccc accacagcgg cctggcgttg gccattgatt cggtggtcaa 3661 tagcagctac ctccatccgg gcaatgccct gggcacgctc agcaagcggc ccagctgcgt 3721 caattcggac acgccccgat tcgtgtcggt tctgtgcttg cgtagcaagt acgcgggcga 3781 aatcagcggc ctgctgtcgg tgctcagtga gcaggacaag gccggactgg ccgagcgtct 3841 ggtcagcgat gtgtgggagg cgtgccggga taagagcgat gcccgtcacc ggggcgccct 3901 gtggcgagcc accgcctacc tcatcatctg tgcggaggtg gatcgcaagc tgttgcatgc 3961 cgtcgccagt tcgcagctgg aactgttcac ggagtccgtc atggagacgg ccgtcgagtg 4021 ctggcagtgg gtgctgaccg cacggcagga tctcgagctg tgcttcatcc aggagatggt 4081 cagtgcctgg cagacgacct tcgagaagcg catgggtctg tttgccctcg aaaaggaggt 4141 gacccatccg ttggccgcct tcgagggctg caagctcgtc agcagcccca tcctgattgc 4201 accgcatctg atttggctgc agctgctgtc ggagatggtg gacacggcca agtactgtaa 4261 ccgggacaag gtggagatgt tctgcctgct gctgcaccgc tgcctgccca ttctgaagag 4321 cagtcgacag aaccggcagg tggccaccgt cggctgtcgc ttcaagctgc tgcaatgcgg 4381 cctctcgctg ctgcagggca acaccatacc caagtcgctg gcccggaaca tattgcgcga 4441 gcgaatctac tcaaatgccc tcgactactt ctgcggcccg cccacctgcc ccatacagag 4501 cagggaccag ctgctggacg acatactcat tctgctcaag ttctggcaga cgatgcgcag 4561 cgagaagaag catttggtca cctccgaggt gggggactat gacatggcgg cggccaatgc 4621 atcgggcagc tccaatcaaa tgctgggcgt caaggccaat ccagagacgg catcgctgat 4681 cagcggtggg cccgactact cgatgcgttc gatgagcgcc tccggcaatg tgacgggcgg 4741 cagcagcggc tggtacaaca ccataccgca ctcaacgtca acgctatcga agcgctcgaa 4801 tcgatccaag cggctgcagt accagaagga ctcctacgac aaggactaca tgaagaagcg 4861 caatctgata ctcgagctgc tggccgtcga actggagttt ctcatcacct ggtacaatcc 4921 caattgtctg cccgatctga tagtgcctgg cgaggagcag atcaccgaat ggcgcaatcg 4981 tccgtacaag gcgaacgtgt ggcgtgacta tgcccgcctt gcctggtgct acaatccatc 5041 gctggccgtc tttctgccgc aacgtatcaa gaatgccgaa atcattgacg aggaggtctc 5101 ccgcctggtc tgctccgatc cgattgccgt ctgtcatata ccggaggccc tcaagtattt 5161 gtgcaccacc aagaatctgc tgcaagagag tcccgatctg gtgtacatac tctcctggtc 5221 gcccgttacc cccatccagg cattatcgta cttctcgcgg cagtatccat cgcatccgct 5281 caccgcacag tatgcggtca agtcgctatc atcgttcccc gccgaatcgg tgctgccgta 5341 tataccccaa ctggtgcagg cgctgcgaca cgacaccatg ggctatgtgg tggaattcat 5401 taagaatata tcgaagcgtt cgcagatcgt ggcacaccag ctcatctgga atatgcaaac 5461 gaatatgtat atggacgagg atcaaatgca tcgcgatccc aatctgtatg aggcactgga 5521 tttgctctca cagaacatca ttgcctcgtt ctcgggcgcc gccaagcgct tctatgagcg 5581 tgaatttgat ttctttggaa aaattacagc cgtctcgggt gagatacgtt cctttgccaa 5641 gggcattgag cgtaagaatg cctgtttggc ggcccttagc cgtattaagg tgcagtccgg 5701 ctgttatctg ccttcaaatc cagaggccat ggtgctggac attgattaca gcagcggcac 5761 acccatgcag agtgccgcca aggcgccgta tttagcacgt tttcgtgtct ataggtgcgg 5821 catcacggaa ctggagacac gtgccatgga ggtctccaat aacccgaact cgcaggagga 5881 tgccaaaata acgctgggcg ttgagtcgtg gcaggcggcc atctttaagg tgggcgacga 5941 tgtgcgtcag gatatgctgg cgcttcaggt gatcaccata ttcaagaata tcttccaaca 6001 agttggcctc gatctgtttc tgttccccta tcgcgtcgtg gccacagctc caggctgcgg 6061 cgtgatcgaa tgcgtgccga atgccaagtc acgcgatcaa ttgggcaggc aaacagactc 6121 ggggctatcc gagtacttcc agcatcagta tggcgatgag agctccaagg agtttcaggc 6181 ggcgcgtgca aattttgtta aatcgatggc cgcctactcg ctgattgggt atctgctgca 6241 gatcaaggat cgccacaatg gcaacattat gatcgacaag gatggccaca tcatacacat 6301 tgattttggc ttcatgttcg aatcatcgcc cggtggcaat atcggctttg agcccgacat 6361 gaagctcacc gatgagatgg ttatgataat gggcggcaaa atggattcgc ccgccttcaa 6421 atggttctgt gagctatgcg tacaggcctt tctagcggtg cgcccctacc aggatgcgat 6481 tgtgtcgctc gtctcgctga tgctcgatac gggtctgccc tgcttccggg gccagacaat 6541 caatctgctt aagcagcgat ttgtggccac caagaataat aaggaggccg ccgcccatat 6601 gctgtccgtc atacgaaact cttatcagaa tttccgcacg cgtacctatg acatgatcca 6661 gtactatcag aatcagatac cctattagat gtggttacgg ttcctgctgt cgtcctgtgg 6721 tatgatgttt cttttgtttc tctccaaaac aaaacaaaac aaaaacaaca acaaaaagtg 6781 tattgaatta tgtattttgt tttatttttc tatgtatttt tcttaaccta aatatcaatt 6841 tatttctgta ttcccccgct cccccgctcc catcgccctt atgatagtaa ttattaaggt 6901 gttgcaagtt tttcgaagta tttacgatgc atatattaaa tcaattatag ggcaatatgt 6961 tgttcaatgt atctgttacc tacatatata tatatactaa tatacataac atatacacaa 7021 caaaccaaac caatatacac cattaaagta tatacta