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LOCUS XM_019475468 1602 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_019475468 VERSION XM_019475468.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1602) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1602) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1602) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1602) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1602) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1602) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1602 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1602 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /db_xref="GeneID:3640299" CDS 1..1602 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="Putative nucleolar GTPase; repressed by prostaglandins; Hap43-induced, rat catheter and Spider biofilm induced" /codon_start=1 /transl_table=12 /product="putative GTPase" /protein_id="XP_019331013.1" /db_xref="CGD:CAL0000182741" /db_xref="GeneID:3640299" /translation="MGTQKKEKQRRVRENDTRDGNLRVKGENFYRDAKKVKHLNMYKQ GRAIRNKKGEIIKAADLQSTDIPNARVDPNRKWFGNTRVIAQDALTHFREVMGEKSKD SYQVLLKRNKLPMSLLDEKDTTESPTAKIVETESYSSTFGPKQQRKKPRVAASSLEDL MNAAEADSTQFQEKQELDSTLGLMGGSILDKDDFTQEAKEAIFHKGQSKRIWNELYKV IDSSDVVIHVLDARDPVGTRCESVEKYIKDECPHKHLIYVLNKCDLVPTWVAAAWVKH LSKSFPTLAFHASITNSFGKGSLIQLLRQFSTLHSDRKQISVGFIGYPNTGKSSIINT LRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDTESDILFRGVVRVEH VSNPEQYIPDMLQKCERKHLERTYEIKGWSKFEEDESLLERASTEFIELIARKQGRLL KGGEPDESGVSKQILNDFNRGKIPWFVPPPKDEEKDEDKTGEDKKIGYKRKRQEREAA EKELQEKEENQDEDDKEVKKAKLEE" misc_feature 121..513 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="NGP1NT (NUC091) domain; Region: NGP1NT; pfam08153" /db_xref="CDD:462379" misc_feature 640..1110 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases; Region: NGP_1; cd01858" /db_xref="CDD:206751" misc_feature order(778..783,787..792,865..873,970..990,1105..1107) /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206751" misc_feature 778..789 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G4 box; other site" /db_xref="CDD:206751" misc_feature 865..873 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G5 box; other site" /db_xref="CDD:206751" misc_feature 955..>1293 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 964..987 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G1 box; other site" /db_xref="CDD:206751" misc_feature 964..987 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G1 box; other site" /db_xref="CDD:206668" misc_feature 1039..1062 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="Switch I region; other site" /db_xref="CDD:206751" misc_feature 1048..1050 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G2 box; other site" /db_xref="CDD:206751" misc_feature 1048..1050 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G2 box; other site" /db_xref="CDD:206668" misc_feature 1096..1107 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G3 box; other site" /db_xref="CDD:206751" misc_feature 1096..1107 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="G3 box; other site" /db_xref="CDD:206668" misc_feature order(1102..1107,1183..1188) /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="Switch II region; other site" /db_xref="CDD:206668" misc_feature 1102..1110 /gene="NOG2" /locus_tag="CAALFM_C603640WA" /note="Switch II region; other site" /db_xref="CDD:206751" ORIGIN 1 atgggaactc aaaagaagga aaagcaaaga agggtaaggg agaatgatac cagagacggt 61 aatcttcgag ttaaaggaga aaacttttac cgtgatgcta aaaaagtgaa acatttgaat 121 atgtataaac aaggaagagc tattcgtaat aagaagggag aaataataaa agctgctgat 181 ttacaaagta cagatatacc aaatgcaaga gttgatccaa atagaaaatg gttcggtaac 241 acaagagtga ttgctcaaga tgctttaacc catttcagag aagttatggg tgaaaaatcc 301 aaagattcat atcaagtatt attgaaaaga aataaattac caatgtcatt attggatgaa 361 aaagatacaa ctgaatcacc aactgctaaa attgttgaaa ccgaatcgta ttcctcgaca 421 tttggtccta aacaacaacg taagaaacct agagtcgctg cttctagttt ggaagattta 481 atgaatgctg ctgaagctga ttcaacccaa ttccaagaaa agcaagaatt agattcaact 541 cttggattaa tgggtggttc tatcttggat aaagatgatt tcacacaaga agctaaagag 601 gctattttcc ataaaggtca atccaaacgt atttggaatg agttatataa agttattgac 661 tcttctgatg tggttataca tgtgttggat gccagagatc cagttggtac cagatgtgaa 721 tctgttgaga aatacataaa ggatgaatgt cctcataaac atttaattta tgttttaaac 781 aaatgtgatt tagttccaac ttgggtagcg gctgcttggg ttaaacattt atcaaaatca 841 ttcccaacat tagcatttca tgcttctata accaactcgt ttggtaaggg ttctttgatt 901 caattattaa gacaattttc aactttacat tcagacagaa aacaaatttc tgtggggttc 961 ataggatacc caaacactgg taaatcaagt ataataaaca ctttgcgtaa gaaaaaagtt 1021 tgtcaagttg ctcctatacc cggtgaaacc aaagtttggc aatatattac tttgatgaaa 1081 cgtatattct tgattgattg tcctgggatt gttccacccc tgagcaaaga taccgaatct 1141 gacattttat tcagaggtgt ggtgagagtg gaacatgttt ctaatccaga acaatacatc 1201 cctgacatgt tgcaaaaatg tgaaagaaaa catcttgaga gaacctatga aatcaaaggt 1261 tggagtaaat ttgaggaaga tgaaagtcta ttggaaagag ctagtacaga atttatagaa 1321 ttaattgcta ggaaacaagg tagattgttg aaaggtggtg aaccagatga aagtggtgtt 1381 tctaaacaaa tattaaatga tttcaaccgt ggtaaaatcc cttggttcgt acctccacca 1441 aaggatgagg aaaaagatga agacaaaact ggtgaagata agaaaattgg ctacaagaga 1501 aagagacaag aaagagaagc tgctgagaaa gagctacaag agaaagaaga aaatcaagat 1561 gaagatgata aagaagttaa gaaagctaaa ttagaagagt aa