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LOCUS XM_017158332 1743 bp mRNA linear INV 09-DEC-2024 component subunit alpha, mitochondrial (LOC108068641), mRNA. ACCESSION XM_017158332 VERSION XM_017158332.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158332.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1743 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1743 /gene="LOC108068641" /note="probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068641" CDS 123..1625 /gene="LOC108068641" /codon_start=1 /product="probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial" /protein_id="XP_017013821.2" /db_xref="GeneID:108068641" /translation="MKPNRIRLVVGRSGARSLLHRNILSSIIGRHKCSCLTLENTFKC YDLETGPTMDVELSREDALSMYTRMLELRRFETVAGNSYKQRLIRGFCHLYTGQEAVA VGMKERLRRCDSVITAYRCHAWTYLMGVSLYEIMAELLGLRTGCSRGKGGSMHMYGEN FYGGNGIVGAQVPVGTGIGLAHSYRKDNGVCVILYGDGAANQGQVFESFNMAKLWCLP CIFVCENNHYGMGTHEKRASAMTEFYMRGQYIPGLWVDGNQVLAVRSATQFAVDYALK EGPIVLEMSTYRYVGHSMSDPGTSYRSRKEVQAVRESRDPITSFRSQILTLCLADEEE LKALEERTKKQVDAECKRAAKDKEVELQELHTDIYAKNVDGKIRGVSRFDLEHIRLSE VCFGKPRKTPASEIKDVPVGAAVDAAKAKERKAAQEAKEAKEGQKKKKEDSKDLKNSK EPKDPKPVDPKPPTAAAAPPAKTPPSKAPPSKAPPAKKTPPTKAPTDPKK" misc_feature 228..1268 /gene="LOC108068641" /note="Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and...; Region: TPP_enzymes; cl01629" /db_xref="CDD:470272" misc_feature order(387..389,543..545,618..623,714..716,720..731, 738..740,750..752,762..764,807..818,858..860,867..869, 1008..1010,1020..1022) /gene="LOC108068641" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:238958" misc_feature order(477..482,618..620,624..626,708..719,798..800, 804..806,996..998) /gene="LOC108068641" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:238958" misc_feature order(603..605,609..611,615..617,630..632,639..644, 651..656,660..665,672..674,729..734,750..755,762..764) /gene="LOC108068641" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:238958" misc_feature order(981..1001,1005..1037,1062..1070) /gene="LOC108068641" /note="phosphorylation loop region [posttranslational modification]" /db_xref="CDD:238958" ORIGIN 1 tcattgtcgt ttatttacct aaaatcgtat cagtttcagt tatttttgaa aattttcaaa 61 atttaggagc gcggcctcta gcaagaagac cacgtgtttc gagattagaa tcaaggccag 121 ttatgaagcc caaccgaatc cgtttggtag tgggacgcag cggagctcga tccttacttc 181 atagaaatat cctgtcctcg attattggtc gtcacaaatg tagctgcctc accctcgaaa 241 atacgttcaa gtgctacgat ttggagacgg ggcccacgat ggacgtggag ctgtcgcggg 301 aggacgccct gtcgatgtac accaggatgc tggagctgcg gcgcttcgag acggtggccg 361 ggaacagcta caagcagcgg ctgattcgtg gcttctgtca tttgtacacg ggtcaggagg 421 cggtggccgt tgggatgaag gagcgtttgc gtcgctgcga ttcggtgatc acggcctatc 481 gctgccatgc ctggacctat ttaatgggcg tgtccctcta cgagatcatg gccgagctac 541 tgggcctgcg aaccggttgc agccggggca aaggtggctc catgcacatg tacggcgaga 601 acttctatgg cggcaacggg atagtgggtg cccaggtgcc cgtgggcacg ggcattggtc 661 tggcccacag ttatcgcaag gataacggcg tctgtgtgat cctctatggc gacggggcgg 721 cgaatcaggg acaggtcttc gagtccttca acatggccaa gctgtggtgc ctgccctgca 781 tctttgtctg cgagaacaat cactacggca tgggcaccca cgagaagagg gcctctgcca 841 tgacggagtt ctacatgcgg ggtcagtaca tcccggggct ctgggtcgat ggcaaccagg 901 tgctcgccgt gcgcagtgcc acccagtttg ccgtcgacta cgctttaaaa gaaggaccca 961 ttgtcctgga gatgagcacg tatcgctatg tgggtcactc catgtccgat cctggtactt 1021 cctatcgctc caggaaggag gtgcaggcgg tgcgcgagtc ccgggatccc atcaccagct 1081 ttcgtagcca aatactcacc ctctgcctgg ctgacgagga ggagctgaag gcgctggagg 1141 agaggaccaa gaaacaggtc gacgcggagt gcaagagggc ggccaaggac aaggaggtgg 1201 agctgcagga gctgcacacg gacatctatg ccaagaatgt ggatggcaag atccgcgggg 1261 tgtccaggtt cgatctggag catatcaggt tatcggaggt ttgttttggg aagcccagga 1321 agacgccggc cagcgagatc aaggatgtgc cagtgggagc ggcggtggat gcggccaagg 1381 ccaaggagag gaaggcagcc caggaggcca aggaagccaa ggagggccag aagaagaaga 1441 aggaggactc caaggacttg aagaactcca aggaacccaa agatcccaag ccagtagacc 1501 caaaaccacc cactgctgct gccgcaccac ccgctaaaac accaccctcg aaagcaccac 1561 cctcgaaagc tcctcccgcc aagaaaacac cacccaccaa agccccaacg gatcccaaaa 1621 agtaatggcc catcggagat ctccacccgg ctgaaagttt agtggatttc taaacccaag 1681 aaactcgttt aactcaagaa cagttcaaaa taatattgta caaattaaag aaaaagcgat 1741 gaa