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LOCUS XM_017157427 6009 bp mRNA linear INV 09-DEC-2024 (Hecw), transcript variant X1, mRNA. ACCESSION XM_017157427 VERSION XM_017157427.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157427.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6009 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6009 /gene="Hecw" /note="Hecw ubiquitin protein ligase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:108068051" CDS 332..4465 /gene="Hecw" /codon_start=1 /product="E3 ubiquitin-protein ligase HECW2 isoform X1" /protein_id="XP_017012916.2" /db_xref="GeneID:108068051" /translation="MELLDRSPVEPIAVSLQQEGEQEEEEEDEEEEDDANKEEEAFYD SRNGNESDELEQAFQSALTLTNDVQVSVSEVEVEQEKEEQLPEHQEHLGACALASPKE EEKPPRHQTLLSTKSCETNPANSATLSPTNSYNGSIGSDGGSSSVGVGGGARRKSWTL SPQSGGSTPLSGAKKKTKATASNSLANGEGFNLWVARECFETVPAEMVDSLSMAEVEE EQEEEEQQEQEEEEDEEDEEAAAVESLLGAAAALQASTHVQRRQQQQKQEQQHHHHHH HLQPQHRPLERSWPPRAVGRDLKLQGDVFQFDILDTDERLAEMEMAQCGSSNNSPLAT PPVRFKPLLKKKIGPDSYINTISTQKVPVHQSYEFPTFPSSSSGVGSSSQFPHLRQHR PLTRALSNGKASSSEDQASPRLLLSPKRPRSPPSGCSTRSASPLDLSLSPEQHSPTRG RGVGGIQDAGTPQRPQQRLLKRVGGGAGGGATGSPLVCPPTPTHHARRHARLQAVTAN SSGAGEPSVVAPSQLEPPPDEVVHISSTRLPSIPERSAAAAAAAAAAAAGAALMEPGT GVAMSSGAAGEPPLPPAWEARMDSHGRIFYIDHTTRTTSWQRPGAAPSGGPAGREQHH RQQLDRRYQSIRRTITNESRAAQLYNLPSSGNPPVAAPGAPTAPPPPPAAHPAILMLC RPDFYSLLHTNEAALAIYNRNAALKHMVMRIRRDPQCFQRYQYNKDLVALVNTFAQIS RELPSCWETKLDQSGKQFFIDHQHRRTSFMDPRLPVECPRVVRHRQQQQQTQQPTSGV GYYYPDLVDGNCLSATSGHINASPGSSVSGVPPLPPPRPSSSSSSAASSSAARSSHGH GHNCTTTAAIACALSMDRSAGGAAGMGATGMAAGYEDVPIAYNEKVIAFLRQPNILEI LRERQGQHTMSRPLREKINILRVEGVPALERLGHDLQLTILLSLFEQEIMSYVPIEER SPQGSPVLSSRMPQRAPPPFRRDFEAKLRSFYRKLESKGYGQGPHKLKLHIRRSHLLE DAFRRIMSANKKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSA NDTYTVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVAL SDLESLDNEFHQSLQWIRDNDIGTGVDLGLTFCVTEELLGRVVERELKPGGKNIIVNE KNKKEYLERMIKWRLERGVQEQTESLVRGFYEVVDSRLVSVFDARELELVIAGTAEID TNDWRLNTEYRSGYHDNHQVIVWFWQVIERFSNEQRLRLLQFVTGTSSIPYEGFSALR GSTGPRRFCIEKWGKPNALPRAHTCFNRLDLPPYPTPELLYEKLLLAVEETNTFGIE" misc_feature 2069..2158 /gene="Hecw" /note="WW domain; Region: WW; pfam00397" /db_xref="CDD:459800" misc_feature 2372..2542 /gene="Hecw" /note="Helical box domain of E3 ubiquitin-protein ligase HECW1; Region: HECW1_helix; pfam18436" /db_xref="CDD:465766" misc_feature 3386..4456 /gene="Hecw" /note="HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional...; Region: HECTc; cd00078" /db_xref="CDD:238033" misc_feature order(3404..3406,3497..3499,3530..3532,3713..3715, 4241..4243,4346..4351,4358..4372,4430..4432,4451..4453) /gene="Hecw" /note="catalytic cleft [active]" /db_xref="CDD:238033" misc_feature order(3797..3799,3806..3811,3815..3820,3827..3829, 3851..3853,3857..3859,3869..3871,3875..3877,3893..3895, 3908..3910,3959..3961,3971..3973) /gene="Hecw" /note="E2 interaction site [active]" /db_xref="CDD:238033" polyA_site 6009 /gene="Hecw" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aggcgctctc ctctagctta ttgcaccatt gccatctggt agcactgttt tgcgataaaa 61 aactattctt tagctttgca actttaatta acaattaaac aattgataaa attaaaaggc 121 gaaaatatag aacggccgga ctaatggcag tgagcgggga aatgcgcggg tcgaagggca 181 gccaaggtca caacgcggaa gtagagcaat tgcagctgta actgtaaccg ttaaccctgg 241 gcagggcgcg ggggttgggt tggctagggg aagaagagga ggcagagtgg aagaggaaga 301 gcacatcttg agttccggag gcggaggaga aatggagctg ctggacagga gccccgtgga 361 acccatagca gtcagcttgc agcaggaggg ggagcaagag gaggaggagg aagacgaaga 421 ggaggaggat gatgccaaca aggaggagga ggccttctac gattcgcgca atggcaacga 481 aagcgatgaa ctggaacagg ccttccaaag cgccctcacc ctgaccaacg atgtccaggt 541 gagtgtgagt gaggtggagg tggagcagga gaaggaggag cagcttcctg agcatcagga 601 gcacctgggc gcctgcgcac tggcatcccc caaggaggag gagaagccac cccgccacca 661 gacgctgctc tccacgaaat cctgcgagac caatccagcc aacagtgcca ccctttcgcc 721 cacaaattcc tacaacggca gcatcggcag cgatggcggc agcagcagcg tgggcgtggg 781 cggcggtgcc cgtcgcaaat cctggacgct gtcgcctcaa agcggcggct ccacgcccct 841 cagcggcgcc aagaagaaaa ccaaggccac cgctagcaac tccctggcca atggagaggg 901 ttttaaccta tgggtggctc gcgaatgctt tgaaacagtg cccgccgaaa tggtggatag 961 cctgagcatg gctgaggtgg aggaggagca agaggaggag gagcagcagg agcaggagga 1021 ggaggaggat gaggaggacg aggaggcggc tgccgtggag agtctcctgg gagcagccgc 1081 tgccctccag gctagcacac atgtgcagcg ccgtcagcag cagcagaagc aagagcaaca 1141 gcatcatcat catcatcacc atctgcagcc gcagcatcgt ccgctggaac gctcctggcc 1201 gccgcgtgcc gtgggtcgcg atctcaagct gcagggcgat gtctttcagt tcgacattct 1261 ggacacggac gagcggctgg ccgagatgga gatggcccag tgcggcagct cgaacaactc 1321 accactggcc acgcctcccg tgcgtttcaa gccgctgctg aagaagaaaa tcggtccgga 1381 tagctacatc aatacgatta gcacgcagaa agtgcccgtg catcagagct atgagtttcc 1441 caccttcccc agctcctcct cgggtgtcgg atcctcgtcg caatttcccc atctccgcca 1501 gcaccgtcca ctcacccgag ctctgtccaa tggcaaggct agctcctcgg aggatcaggc 1561 ctcgccgcga ctcctgctct cgccaaagcg tccccgaagt ccgccctccg gctgctccac 1621 gcgcagtgcc tcgccgctgg atctcagcct cagtcccgag cagcattcgc ccaccagagg 1681 aaggggcgtg ggtggcatcc aggatgctgg gacgccgcag cgaccgcagc agcggctgct 1741 caagcgcgtg ggcggaggag ccggaggagg agccactggt tcgcctctgg tgtgtcctcc 1801 cacgccaact catcatgcaa ggcgacatgc ccgcctgcaa gccgtcactg ccaactccag 1861 cggagcagga gaacccagtg tagtcgcccc tagtcaattg gagccgccgc ccgatgaggt 1921 ggtgcatatt agtagcaccc gtttgccctc cattcccgaa cgcagtgcag ctgcggcagc 1981 ggcggcggcg gcagcagcag cgggagcagc tctcatggaa cccggaacag gtgttgcaat 2041 gtccagcgga gcagcgggag agccaccact gccgccggcg tgggaggcac gcatggatag 2101 ccacgggcgc atcttctaca ttgatcacac gacgcggaca acctcctggc agcgaccagg 2161 agcggcacca agtggcggac cagccgggcg ggagcagcat catcgccagc agctggacag 2221 aaggtatcag agcatccggc gcaccataac caatgagagc agagccgctc agctgtacaa 2281 tctgccttcg tcgggtaatc ctccagttgc tgctccaggt gctcctactg ctcctcctcc 2341 tccccccgcc gctcatcccg ccatcctgat gctctgccgc ccggatttct actccctgct 2401 gcacaccaac gaagctgcgc tggccattta caatcgcaat gccgccttga aacacatggt 2461 catgcgcatc cgacgggatc cgcagtgctt ccagcggtat cagtacaaca aggatctggt 2521 ggcgctggtc aacaccttcg cacagataag cagggaactg ccgtcgtgct gggaaacgaa 2581 gctggatcag tcgggcaagc agttcttcat tgaccaccag catcgacgca cctccttcat 2641 ggatccccgc ctgccggtgg agtgtcctcg ggtggtgcga catcgccagc agcagcagca 2701 aacgcagcag ccgacaagtg gcgtgggcta ctattatccc gatctggtgg atggcaactg 2761 cctgtcggcc accagtgggc atataaatgc cagtccggga tcctcggtct ctggagtgcc 2821 gcccctgccg ccgcccaggc cctcctcctc ctcctcctcc gccgcctcct catccgccgc 2881 ccggagcagc catggtcatg gccacaactg caccaccacg gcggccattg cctgtgcctt 2941 gagcatggat cgctcggcgg gcggagcagc cggaatggga gctaccggaa tggccgctgg 3001 gtacgaggat gtgcccattg cctacaacga aaaggtcatt gccttcctgc gccagccaaa 3061 catcctggag attctgagag aacgccaggg acagcacacc atgtcccggc cgctgcgcga 3121 gaaaatcaat atactgcgag tggagggagt tcccgctctc gagagattgg gccacgacct 3181 acaactgacc attttgctga gcctgtttga gcaggagatc atgagctatg ttcctattga 3241 agagcgcagt ccccagggat cgccggtgct cagttcccgg atgccgcagc gggcgccgcc 3301 gccgtttcgc agggatttcg aggccaagct gcgcagcttc taccgcaagc tggagtccaa 3361 gggctatggc caggggccgc acaagctaaa actccacatc cgacgcagcc atttgctgga 3421 ggacgccttc cgtcgcatca tgtcggcgaa caagaaggac ctgcagcgcg gccgcctcgc 3481 cgtcctgtgg gacacggagg agggcctgga ctacggcgga ccctcccgcg agttcttctt 3541 cctgctctcc cgcgaactgt ttaaccccta ctacggcctg ttcgagtatt cggcaaatga 3601 tacgtacacg gttcaagtgt cgccgctgtc ggcgttcgtg gacaactgcc acgattggtt 3661 ccgcttcagt ggtcgtgttt tgggtctggc cctcgtccat caatatctgc tggacgcctt 3721 cttcacgcgg cccttctaca aggctctcct gcgactgccc gtcgccttga gtgatctgga 3781 gtcgctggac aatgagttcc atcagtcgct gcagtggata cgcgacaatg acattggaac 3841 gggcgtggat ctcggtctga ccttctgcgt caccgaggag ctgcttggtc gggtggtgga 3901 gcgtgaactg aagccgggcg gcaagaacat cattgtgaac gagaagaaca agaaggagta 3961 tctggagcgg atgatcaagt ggcggctgga gcgaggcgtt caggagcaga cggagtcgct 4021 ggtgcgcggc ttctacgagg tggtcgactc gcggctcgtc tccgtcttcg atgcccgtga 4081 attagagctg gtgatagcag gaaccgccga gatcgacacg aacgattggc gcctgaacac 4141 agagtatcgg tcggggtatc acgacaacca ccaggtgatc gtgtggttct ggcaggtcat 4201 cgagcggttt agcaacgagc agcgtttgcg tctgctgcag tttgtcaccg gcacctcgag 4261 cattccgtac gaaggtttct ccgcgctgcg cggatcgacg ggaccgcggc gtttttgcat 4321 cgagaagtgg ggcaaaccga atgccctgcc ccgcgcacac acctgcttca atcggttgga 4381 tctgccgccc tatcccacgc ccgagctgct ctacgagaag ctgctgctgg ccgtcgagga 4441 gaccaacacg ttcggcatcg agtaggcagc acgtgatatt attgcacctc agccgccgca 4501 ctttgttgca cccaaaaaaa aaaaacgctt tatttcgatt ttagaagttt tttttagaac 4561 ttgcctaagt ctaggaattc ggggtgatgc agaaatctct gagaaaacta tttaaaatca 4621 attgaattta attttttgaa tgctaatccc tagatataat aaacgaaatt tgaagtttac 4681 ttcgtttccc ttgagaaaaa attagttgtt agctatttct aggcgcctaa attatactgg 4741 gatttctgca acaccccacc ccgattgtac tgtagttatt tatatacgta ggttacccgt 4801 ccccttcaaa agaaaacaaa aaagagaaga agcctagcca tagacagact cgctacttta 4861 ggcatcccac acactagttc gtagacaatt tgccttcgcc ttcgtttgcc gttcactgaa 4921 tggaagttac ctcaagagca aaacggcttg ccagcgccgc cagtcattag tcctaagatc 4981 ttaaaaccca aaccttataa gacccccata aacttataaa ctgtaagcct aaggatcctt 5041 cgcttgactc tgcctgattt acaatcgaaa cgatgccaac tgcctctaga gaaattttca 5101 acgcctaatc gctgctccag attcagaagt tcaacggggg ccccaaagaa aaaaaggaga 5161 gcagagcaac tctacgccaa tacttaacta gcttataatg ttgtcttagc cttaactcga 5221 attccaactc aaatttgaac actccctaga tgtgtgcatt ccaaataagc gtattgtgga 5281 tgtcagttat tatatagcat ataatatata tacccctatt tacccctctc tcctttaacc 5341 caaacaaaaa aagtatgtaa actgtttttg aatttacaaa accccttaac tatccgtgcg 5401 gaggctgccg tgtgcttcct gcggcctgcc acttgaccaa atctctggcc aggacacagg 5461 actccacatg gcggctccga tcgggtctat atggtatatt atatatacac attttggctg 5521 ctgttttgcc aacgattaca aattggtcca gtgcgttgct tcggctttat tggttatttc 5581 ggcgcataaa attaatatgg attatattta acgaaaacat acaaaaattc gaaacgtagc 5641 taaataatta taaaaaaaag aaaagaaaaa aataaaaaaa caaatttttt aatattagta 5701 ttgatcgaaa gcgagagcga aacgaaacga aaagataact aaatggtgat ttgtttacat 5761 gtatttttgg cattagttaa tacggaaagc gaaagagacg gaaggccaga gatggagaga 5821 gatagagcga tagacagagc tggagacagt gtcagtgaaa gagacagaga tagaaagata 5881 aaaagcgctt tttgaactac ttattgataa atgaattgtt ttaatgaatt attaatgtgc 5941 gtgtatttat gaacaaatta actataatta taaacaaata aatgtgagcc ttttacttca 6001 aaagcaaaa