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LOCUS XM_017155670 4889 bp mRNA linear INV 09-DEC-2024 variant X26, mRNA. ACCESSION XM_017155670 VERSION XM_017155670.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155670.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4889 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4889 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 16..2760 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X23" /protein_id="XP_017011159.2" /db_xref="GeneID:108066907" /translation="MIDWVSIVRHSRRRFSNYVGSRSPVRMRRRRRQLTAPPPPQQQQ QQQQQHQQEQHQSRDRQKKDKEIEREKERDKDSDSGGGSRYACCCANNQRMRIESDTE NAKEPPAEQQQQRSSRSPQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYED IQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEV SVVDVPHASAVDALKKAGNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLV KGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEK NLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLAT SQSQSQVHQQQQQHQTPMVNSQSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRT ITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHAT HEEAAQALKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGAGGSGTLLRTTQKRS LYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIV PSKRRWERKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTFSRKFPFMKSRDEKN EDGSDQEPFMLCYTQDDANAEGASEENVLSYEAVQRLSINYTRPVIILGPLKDRINDD LISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDNL YGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNRRMT EEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIWVPSKESL " misc_feature 487..753 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(520..540,589..591,598..600,688..690,700..702, 709..714) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 829..1095 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(856..876,925..927,934..936,1036..1038,1048..1050, 1057..1062) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 1354..1626 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(1390..1410,1441..1443,1450..1452,1540..1542, 1552..1554,1561..1566) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 1717..1899 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(1723..1725,1789..1794) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(1732..1734,1738..1740,1747..1749,1774..1776, 1828..1833,1888..1890,1894..1899) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 2182..2718 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 4889 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtacactgt gagaaatgat tgactgggtg tcgatagtgc ggcactcgag gcgccgcttt 61 tcaaattatg ttggctcgcg gtcgccggtg cgaatgcgtc gacgtcgacg tcaattgacg 121 gcgccgccgc cgccgcagca acagcagcag cagcaacaac aacatcagca ggagcaacat 181 caatccaggg atcgtcagaa aaaggataag gaaatagaaa gagaaaaaga aagggacaag 241 gacagtgatt cggggggcgg ttcgcggtat gcctgctgtt gtgccaacaa tcagcgaatg 301 cgcatcgagt cggatacgga aaatgcgaag gagccaccgg ctgagcagca gcagcagcgc 361 agttcccgct ccccgcagca gaatccgcaa cagcagcagc cgcaacagca acagcagccg 421 caacagcagc tgggatccaa gtcaaggagc gggtcgcaga ctgtaaacgg cgatgatagc 481 tggttgtacg aggacattca gctggagcgc ggcaactccg gattgggatt ctcgattgcc 541 ggcggcacgg ataatccgca catcggcacc gacacctcca tctacatcac caagctaatt 601 tccggcggag cagctgccgc cgatggacgg ctgagcatca acgacattat cgtttcggtg 661 aacgaggtgt ccgtggtgga tgtgccgcat gcctccgccg tggatgccct gaaaaaggcc 721 ggcaatgtgg tcaagttgca tgtgaagcga aaacgtgaca cggcggccac cactccggcc 781 gcaggatcgg cggctggaga tgcccgcgat ggtggaccca aggtcatgga aatcgatctg 841 gtcaagggcg gcaagggatt gggcttctcg attgccggcg gcattggcaa ccagcacatc 901 cccggcgaca atggcatcta tgtgaccaag ctgatggacg gcggagcggc gcaggtggac 961 ggacgtctca atatcggcga caaactcatt gcagtgcgca ccaatgggag cgaaaagaat 1021 ctggagaacg taacgcacga actggcggtg gccacgctaa aatcgatcac cgacaaggtg 1081 acgctgatca ttgggaagac gcagcacctg accaccagtg cgtctggcgg cggaggagga 1141 ggcctctcat ccggacagca gttgtcgcag tcgcagtcgc agttggccac cagccagagc 1201 caaagtcagg tgcaccagca gcagcagcag catcagacgc cgatggtcaa ttcgcagtcg 1261 acagagcccg gctcgcgata tgcctccaca aatgtcctgg ccgccgttcc gccaggaact 1321 ccgcgcgcag tcagcaccga ggatataacc agagaaccgc gcaccatcac catacagaag 1381 ggaccccagg gcctgggctt caatatcgtt ggcggcgagg atggccaggg catctatgtg 1441 tccttcatcc tggccggcgg tccagccgat ctcggatcgg agctgaagcg cggcgaccag 1501 ctgctcagcg tgaacaatgt caatctcacg catgccaccc acgaggaggc ggcccaggcg 1561 ctcaagactt ctggcggcgt ggtgaccctg ctggcgcagt accgacccga ggagtacaac 1621 cgcttcgagg cgcgcatcca ggagctgaaa cagcaggctg ccctcggcgc cggcggatcg 1681 ggaaccctgc tgcgcaccac gcagaagcga tcgctctatg tgcgcgccct gttcgactac 1741 gatcccaatc gggacgacgg cctgccctcg cggggattgc ccttcaagca cggcgacatc 1801 ctgcacgtga ccaatgcctc cgacgacgaa tggtggcagg cgcgacgcgt tctcggcgac 1861 aacgaggacg agcagatcgg cattgtgccg tcgaagaggc gctgggagcg caagatgcgg 1921 gctcgggatc gcagcgtcaa gttccagggc catgcggcag ccaataataa tgtggataag 1981 caatcgacat tggatcgaaa gaaaaagaat ttcacattct cgcgcaaatt tccgtttatg 2041 aagagtcgcg atgagaagaa tgaagatggc agcgaccaag agccctttat gctttgctac 2101 acacaagacg atgccaatgc tgaaggagct tccgaggaga acgtcctgtc ctacgaggcc 2161 gtgcagcgcc tgtccatcaa ctacacgcgc cctgtgatta ttctggggcc gctgaaggat 2221 cgcatcaacg atgacctaat atcggagtat cccgacaagt ttggatcctg tgtgccacac 2281 accacccgac ccaagcggga gtacgaggtg gacggcaggg actatcactt tgtgtcctcg 2341 cgcgagcaaa tggagcggga catccagaac catctgttca tcgaggcggg ccaatataac 2401 gacaatctgt acggcacatc ggtggccagt gtgcgcgagg tggcggagaa gggcaagcac 2461 tgcatcctgg acgtgtccgg gaatgccata aagcgcctcc aggtggccca gctctatccc 2521 gttgcagtgt tcatcaagcc caagtcggtg gattcggtga tggagatgaa tcgtcgcatg 2581 acggaggagc aggccaagaa gacgtacgag cgggcgatta aaatggagca ggaattcggc 2641 gaatacttta ccggcgttgt ccagggcgac accatcgagg agatctacag caaagtgaag 2701 tcgatgattt ggtcccagtc gggaccaacc atttgggtac cttccaagga atctctatga 2761 ccaacagcca ccacaacttg gacactgccg cctcgagttc gatgccgacc ggtctcgaga 2821 acaacaatag gagcaacggc ggcagcagca acaaatcagc agccgcactg atgatgcatc 2881 acagtagcaa caacagaagc agcaacagca acaacaacta ctacaacagc agaagcagcc 2941 acagcaacag caacaacaac aactacagta ctactgacaa cgacaggaaa cggaaacaga 3001 aactagaaaa ccagaaaaca gaaccactga ctacttagaa acttaaccga cagacagtaa 3061 aatttatatt gacgcagccg cagcagccaa cttaatgtag caaattgtcc aaagcaattt 3121 tatttggatg cactcattga tgtacggtca ggtgaacgta catcccagca gctagacgag 3181 gatgggcgaa catcagagca aagcatttgg catttggcaa cgtagggaag atgagatgat 3241 gagatgggtg ttcaaactga agcggacaaa ggtgtatagt ttttagttag aacaaagttg 3301 gatataaaca aaaaaaaaag ataaagaagc gaaatatata atatatatac acaccactta 3361 tatagactaa gatccgatta tataaaagca tagagatgat cagacgagga gacgagggct 3421 ttagggagtt cgttaagcgc tagagtgttg tttgtttatg ttgatgttta tatacgagag 3481 ccaagagtta tagcgagtta gttatgttga cgataatgtg ttttttgata tatattgatc 3541 tatatgaaat atgtattgcc tggtggttaa ctttaagtac gacaatgttt agtagctgac 3601 tacgaataat gacgacgata atgacgggac gcagatgcgg aggcggatgc gaatgcggat 3661 gcggttacgg ttgcggatct agcggaaagt cagataatga cgagaataac gatttacgat 3721 tacgattacg atctaatgat aatgatataa tatatatatt gatgaatatc gaagctaata 3781 acgagatgaa gaagaacgtt ggtgcatttg ttgttagatg tatgtaattt ttcccactcg 3841 cctttgccta aagcaacaca aaagtaaaaa aaaagtaaaa aaaccaagaa gaaaacagaa 3901 aactaaaccg aaatcaataa acatgcgtat gataaatact agaaactagc ggaaaagttg 3961 catataaaac catagacatt cattcacaca tctacttact atatatatat atatatctgt 4021 accatttagc ctatagtccg caagagatcg tcgaaacaaa gtcattttac tatataaata 4081 tacacaaaac acccgcataa tgtaaacttg gtgtgcagag agaaaaggaa aaagaagaag 4141 aagtgagaaa aaagcgagag gagtggagaa atcgaatgga atttgttgtc gcgttgattt 4201 aaatctatat aatgagtaaa atattgtata tttaacaatc tatgaaacaa atatagtatg 4261 tagataaaac acacacacac acatacacac gaacacgaac ccatacaagc atacatggat 4321 taccgttgcg gtctaatttt atacacacaa acacacaaga caaatcgaat tgcaaaggca 4381 aataaataat taaataagaa agcgaaaaag aagaagaagc agaagcggaa acggaagtga 4441 cgccaagaag aagaagaagc gagctggaga tgagatcaac tcaaactaga taactataca 4501 tatatttgct gattaattta tatttatata aaccaatcta cgatttatag ccaacgcaca 4561 gaaaaaacaa acaaaacaca ttcgaaattt gttcgaaaaa atttagcaaa attcaagttg 4621 agtgttaaca ttattatcca tgcgaatatg cttgaaaata ttattatttt ctactctgtc 4681 catcgtctct cttgcttccc ttcttacata catacttact acttgaaaca tttttttatt 4741 tgtatttaat tttttttttt tatattgcaa aaacgtcgca aaaacgacgc cacagcagca 4801 gcagctatgg atattatttc aaaaatatat acatataact attgtacgaa ataaagagaa 4861 tacaaattga ttataatttt cacaatgta