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LOCUS XM_017155669 5530 bp mRNA linear INV 09-DEC-2024 variant X25, mRNA. ACCESSION XM_017155669 VERSION XM_017155669.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155669.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5530 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5530 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 654..3401 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X22" /protein_id="XP_017011158.2" /db_xref="GeneID:108066907" /translation="MPVKKQEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSR LFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADNQRMRIESDT ENAKEPPAEQQQQRSSRSPQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYE DIQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNE VSVVDVPHASAVDALKKAGNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDL VKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSE KNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLA TSQSQSQVHQQQQQHQTPMVNSQSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPR TITIQKGPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHA THEEAAQALKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGAGGSGTLLRTTQKR SLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGI VPSKRRWERKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTFSRKFPFMKSRDEK NEDGSDQEPFMLCYTQDDANAEGASEENVLSYEAVQRLSINYTRPVIILGPLKDRIND DLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDN LYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNRRM TEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIWVPSKES L" misc_feature 669..845 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1128..1394 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1161..1181,1230..1232,1239..1241,1329..1331, 1341..1343,1350..1355) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1470..1736 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1497..1517,1566..1568,1575..1577,1677..1679, 1689..1691,1698..1703) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 1995..2267 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2031..2051,2082..2084,2091..2093,2181..2183, 2193..2195,2202..2207) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2358..2540 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2364..2366,2430..2435) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2373..2375,2379..2381,2388..2390,2415..2417, 2469..2474,2529..2531,2535..2540) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 2823..3359 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 5530 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagaactagt gttcccgtga gcagagcaga aaaccgaacc atggtggatg gaattataga 61 ataaactaaa tgtgaacaaa aaataaattt tacaaaaaaa gaaaaaaacg atcagagttt 121 ttttttgtgt tggtgttgtg ttgtgaagaa taagaagaaa gacgaaggac atttcgatga 181 cagccgaatt tcaagtgcaa tttaaaagct atagaaccgg aagtagacga ggagccactg 241 aaatgtgaaa ttcgccaaga aatcgagaga aaacgcacac gtcaatgtaa ccacaaaact 301 gccccaaaaa ataataaaat aaaaaaaact aaaagcgcaa aattaaaaac aaatctccaa 361 cttcgttcga aagccaaaaa agcaacaaca atatttgtat ataaaatata gaatatatat 421 attttaaata tatatataca tgtgcccgca gaactaaagg acgaactaaa gccaaagcga 481 tttcgccgca tttttccact cgaaagcgac tccagtaaat tctcaaaatt gcgacccacg 541 ctttttcgag ttcggcggcg ttgaaccaca atcaaagctg ctgcaccacc gccatttccg 601 ctgccatttc caccagcacc accataaata gtagcagaaa caccgcttac agaatgccag 661 tgaaaaagca agaagctcat cgggctctcg agctgctcga ggactatcac gccaggctat 721 cggagcccca ggatcgggca ctgcgtattg caatcgaacg cgttatacgc atatttaaat 781 ctcgcttgtt tcaagcgctg ttagatatac aagaattcta tgaattgaca ttattggatg 841 actcgaagag catacagcaa aagacagcgg agaccttgca aattgcaacc aaatgggaga 901 aggacggaca ggccgttaaa atagccgata atcagcgaat gcgcatcgag tcggatacgg 961 aaaatgcgaa ggagccaccg gctgagcagc agcagcagcg cagttcccgc tccccgcagc 1021 agaatccgca acagcagcag ccgcaacagc aacagcagcc gcaacagcag ctgggatcca 1081 agtcaaggag cgggtcgcag actgtaaacg gcgatgatag ctggttgtac gaggacattc 1141 agctggagcg cggcaactcc ggattgggat tctcgattgc cggcggcacg gataatccgc 1201 acatcggcac cgacacctcc atctacatca ccaagctaat ttccggcgga gcagctgccg 1261 ccgatggacg gctgagcatc aacgacatta tcgtttcggt gaacgaggtg tccgtggtgg 1321 atgtgccgca tgcctccgcc gtggatgccc tgaaaaaggc cggcaatgtg gtcaagttgc 1381 atgtgaagcg aaaacgtgac acggcggcca ccactccggc cgcaggatcg gcggctggag 1441 atgcccgcga tggtggaccc aaggtcatgg aaatcgatct ggtcaagggc ggcaagggat 1501 tgggcttctc gattgccggc ggcattggca accagcacat ccccggcgac aatggcatct 1561 atgtgaccaa gctgatggac ggcggagcgg cgcaggtgga cggacgtctc aatatcggcg 1621 acaaactcat tgcagtgcgc accaatggga gcgaaaagaa tctggagaac gtaacgcacg 1681 aactggcggt ggccacgcta aaatcgatca ccgacaaggt gacgctgatc attgggaaga 1741 cgcagcacct gaccaccagt gcgtctggcg gcggaggagg aggcctctca tccggacagc 1801 agttgtcgca gtcgcagtcg cagttggcca ccagccagag ccaaagtcag gtgcaccagc 1861 agcagcagca gcatcagacg ccgatggtca attcgcagtc gacagagccc ggctcgcgat 1921 atgcctccac aaatgtcctg gccgccgttc cgccaggaac tccgcgcgca gtcagcaccg 1981 aggatataac cagagaaccg cgcaccatca ccatacagaa gggaccccag ggcctgggct 2041 tcaatatcgt tggcggcgag gatggccagg gcatctatgt gtccttcatc ctggccggcg 2101 gtccagccga tctcggatcg gagctgaagc gcggcgacca gctgctcagc gtgaacaatg 2161 tcaatctcac gcatgccacc cacgaggagg cggcccaggc gctcaagact tctggcggcg 2221 tggtgaccct gctggcgcag taccgacccg aggagtacaa ccgcttcgag gcgcgcatcc 2281 aggagctgaa acagcaggct gccctcggcg ccggcggatc gggaaccctg ctgcgcacca 2341 cgcagaagcg atcgctctat gtgcgcgccc tgttcgacta cgatcccaat cgggacgacg 2401 gcctgccctc gcggggattg cccttcaagc acggcgacat cctgcacgtg accaatgcct 2461 ccgacgacga atggtggcag gcgcgacgcg ttctcggcga caacgaggac gagcagatcg 2521 gcattgtgcc gtcgaagagg cgctgggagc gcaagatgcg ggctcgggat cgcagcgtca 2581 agttccaggg ccatgcggca gccaataata atgtggataa gcaatcgaca ttggatcgaa 2641 agaaaaagaa tttcacattc tcgcgcaaat ttccgtttat gaagagtcgc gatgagaaga 2701 atgaagatgg cagcgaccaa gagcccttta tgctttgcta cacacaagac gatgccaatg 2761 ctgaaggagc ttccgaggag aacgtcctgt cctacgaggc cgtgcagcgc ctgtccatca 2821 actacacgcg ccctgtgatt attctggggc cgctgaagga tcgcatcaac gatgacctaa 2881 tatcggagta tcccgacaag tttggatcct gtgtgccaca caccacccga cccaagcggg 2941 agtacgaggt ggacggcagg gactatcact ttgtgtcctc gcgcgagcaa atggagcggg 3001 acatccagaa ccatctgttc atcgaggcgg gccaatataa cgacaatctg tacggcacat 3061 cggtggccag tgtgcgcgag gtggcggaga agggcaagca ctgcatcctg gacgtgtccg 3121 ggaatgccat aaagcgcctc caggtggccc agctctatcc cgttgcagtg ttcatcaagc 3181 ccaagtcggt ggattcggtg atggagatga atcgtcgcat gacggaggag caggccaaga 3241 agacgtacga gcgggcgatt aaaatggagc aggaattcgg cgaatacttt accggcgttg 3301 tccagggcga caccatcgag gagatctaca gcaaagtgaa gtcgatgatt tggtcccagt 3361 cgggaccaac catttgggta ccttccaagg aatctctatg accaacagcc accacaactt 3421 ggacactgcc gcctcgagtt cgatgccgac cggtctcgag aacaacaata ggagcaacgg 3481 cggcagcagc aacaaatcag cagccgcact gatgatgcat cacagtagca acaacagaag 3541 cagcaacagc aacaacaact actacaacag cagaagcagc cacagcaaca gcaacaacaa 3601 caactacagt actactgaca acgacaggaa acggaaacag aaactagaaa accagaaaac 3661 agaaccactg actacttaga aacttaaccg acagacagta aaatttatat tgacgcagcc 3721 gcagcagcca acttaatgta gcaaattgtc caaagcaatt ttatttggat gcactcattg 3781 atgtacggtc aggtgaacgt acatcccagc agctagacga ggatgggcga acatcagagc 3841 aaagcatttg gcatttggca acgtagggaa gatgagatga tgagatgggt gttcaaactg 3901 aagcggacaa aggtgtatag tttttagtta gaacaaagtt ggatataaac aaaaaaaaaa 3961 gataaagaag cgaaatatat aatatatata cacaccactt atatagacta agatccgatt 4021 atataaaagc atagagatga tcagacgagg agacgagggc tttagggagt tcgttaagcg 4081 ctagagtgtt gtttgtttat gttgatgttt atatacgaga gccaagagtt atagcgagtt 4141 agttatgttg acgataatgt gttttttgat atatattgat ctatatgaaa tatgtattgc 4201 ctggtggtta actttaagta cgacaatgtt tagtagctga ctacgaataa tgacgacgat 4261 aatgacggga cgcagatgcg gaggcggatg cgaatgcgga tgcggttacg gttgcggatc 4321 tagcggaaag tcagataatg acgagaataa cgatttacga ttacgattac gatctaatga 4381 taatgatata atatatatat tgatgaatat cgaagctaat aacgagatga agaagaacgt 4441 tggtgcattt gttgttagat gtatgtaatt tttcccactc gcctttgcct aaagcaacac 4501 aaaagtaaaa aaaaagtaaa aaaaccaaga agaaaacaga aaactaaacc gaaatcaata 4561 aacatgcgta tgataaatac tagaaactag cggaaaagtt gcatataaaa ccatagacat 4621 tcattcacac atctacttac tatatatata tatatatctg taccatttag cctatagtcc 4681 gcaagagatc gtcgaaacaa agtcatttta ctatataaat atacacaaaa cacccgcata 4741 atgtaaactt ggtgtgcaga gagaaaagga aaaagaagaa gaagtgagaa aaaagcgaga 4801 ggagtggaga aatcgaatgg aatttgttgt cgcgttgatt taaatctata taatgagtaa 4861 aatattgtat atttaacaat ctatgaaaca aatatagtat gtagataaaa cacacacaca 4921 cacatacaca cgaacacgaa cccatacaag catacatgga ttaccgttgc ggtctaattt 4981 tatacacaca aacacacaag acaaatcgaa ttgcaaaggc aaataaataa ttaaataaga 5041 aagcgaaaaa gaagaagaag cagaagcgga aacggaagtg acgccaagaa gaagaagaag 5101 cgagctggag atgagatcaa ctcaaactag ataactatac atatatttgc tgattaattt 5161 atatttatat aaaccaatct acgatttata gccaacgcac agaaaaaaca aacaaaacac 5221 attcgaaatt tgttcgaaaa aatttagcaa aattcaagtt gagtgttaac attattatcc 5281 atgcgaatat gcttgaaaat attattattt tctactctgt ccatcgtctc tcttgcttcc 5341 cttcttacat acatacttac tacttgaaac atttttttat ttgtatttaa tttttttttt 5401 ttatattgca aaaacgtcgc aaaaacgacg ccacagcagc agcagctatg gatattattt 5461 caaaaatata tacatataac tattgtacga aataaagaga atacaaattg attataattt 5521 tcacaatgta