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LOCUS XM_017155655 5337 bp mRNA linear INV 09-DEC-2024 variant X12, mRNA. ACCESSION XM_017155655 VERSION XM_017155655.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155655.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5337 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5337 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 41..3061 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X12" /protein_id="XP_017011144.2" /db_xref="GeneID:108066907" /translation="MDSDTDDSEREKSSDPNEGLLSSDDKTFHDDDEEEDSSPADDEE EPEGEESLLPQQQKKAQPLVVLVESGSGEAIEEPTEEIEIDRVTLPIKEEREPDPEPE PSPLKHDSVRESVECFYSAQDLLEYGHMLSSSGGSIVRTPDVESGYFEKSESDEGGPP SSSSSLGAARCRLLSGISGLSPVSSSSSRHSAEGLRMELSRFRTMIETLERESLEKTK GKPKPRQRSQLQVESAGESGSDQGSEREMERGFWSTVFGQAGLEISQDEDERIADIKK AHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK SIQQKTAETLQIATKWEKDGQAVKIADNQRMRIESDTENAKEPPAEQQQQRSSRSPQQ NPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGGTDN PHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEVSVVDVPHASAVDALKKAGNV VKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLVKGGKGLGFSIAGGIGNQHIP GDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEKNLENVTHELAVATLKSITDK VTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQQQHQTPMVN SQSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRTITIQKGPQGLGFNIVGGEDG QGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQALKTSGGVVTLLAQ YRPEEYNRFEARIQELKQQAALGAGGSGTLLRTTQKRSLYVRALFDYDPNRDDGLPSR GLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRSVKFQ GHAAANNNVDKQSTLDRKKKNFTFSRKFPFMKSRDEKNEDGSDQEPFMLCYTQDDANA EGGEIIYRVELPDMEQITLIYLENSDADYRKSSI" misc_feature 869..1039 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1322..1588 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1355..1375,1424..1426,1433..1435,1523..1525, 1535..1537,1544..1549) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1664..1930 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1691..1711,1760..1762,1769..1771,1871..1873, 1883..1885,1892..1897) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2189..2461 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2225..2245,2276..2278,2285..2287,2375..2377, 2387..2389,2396..2401) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 2552..2734 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(2558..2560,2624..2629) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(2567..2569,2573..2575,2582..2584,2609..2611, 2663..2668,2723..2725,2729..2734) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" polyA_site 5337 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cttggaagcg acgggacttg tagacttggg gaccacaaaa atggattcag acacggatga 61 ttcggaacgg gagaagagca gcgatcccaa cgagggtctg ctgagcagcg atgataagac 121 ctttcacgat gacgacgagg aggaggactc ttccccagcc gacgatgagg aggagcccga 181 gggtgaggag tccttgctgc cgcagcagca gaagaaagct cagccattgg tggttctggt 241 tgagtctggt tcgggggaag ccatagaaga acctactgaa gaaatcgaaa tcgatcgggt 301 gacattaccc attaaagaag aaagggaacc cgatccggaa cccgaaccct cacccctcaa 361 acacgacagt gtccgcgagt ccgttgaatg cttctattcc gcccaggatc tcctggaata 421 tggccatatg ctgtcctcct ccggaggctc catagttcga acgccggacg tggagtcggg 481 gtatttcgag aagtccgaga gcgatgaggg tggacctcct tcgtcctcct cctcgctggg 541 cgccgcccgc tgtcgtctgt tgtccggcat ttcgggactc tcgcccgtct cctcctcgtc 601 gagccgacac agtgccgagg gtctgcgaat ggaactgagt cgtttccgca ccatgatcga 661 aaccctcgag cgggagagtc tcgagaagac caagggcaag ccgaagccca ggcagagatc 721 ccaattgcag gtggaatcgg cgggggaaag tggttcggat cagggttccg aaagggagat 781 ggaaaggggc ttctggtcca cggtcttcgg acaggcgggt ctggagatca gtcaggatga 841 agacgagcgg attgcggata ttaaaaaagc tcatcgggct ctcgagctgc tcgaggacta 901 tcacgccagg ctatcggagc cccaggatcg ggcactgcgt attgcaatcg aacgcgttat 961 acgcatattt aaatctcgct tgtttcaagc gctgttagat atacaagaat tctatgaatt 1021 gacattattg gatgactcga agagcataca gcaaaagaca gcggagacct tgcaaattgc 1081 aaccaaatgg gagaaggacg gacaggccgt taaaatagcc gataatcagc gaatgcgcat 1141 cgagtcggat acggaaaatg cgaaggagcc accggctgag cagcagcagc agcgcagttc 1201 ccgctccccg cagcagaatc cgcaacagca gcagccgcaa cagcaacagc agccgcaaca 1261 gcagctggga tccaagtcaa ggagcgggtc gcagactgta aacggcgatg atagctggtt 1321 gtacgaggac attcagctgg agcgcggcaa ctccggattg ggattctcga ttgccggcgg 1381 cacggataat ccgcacatcg gcaccgacac ctccatctac atcaccaagc taatttccgg 1441 cggagcagct gccgccgatg gacggctgag catcaacgac attatcgttt cggtgaacga 1501 ggtgtccgtg gtggatgtgc cgcatgcctc cgccgtggat gccctgaaaa aggccggcaa 1561 tgtggtcaag ttgcatgtga agcgaaaacg tgacacggcg gccaccactc cggccgcagg 1621 atcggcggct ggagatgccc gcgatggtgg acccaaggtc atggaaatcg atctggtcaa 1681 gggcggcaag ggattgggct tctcgattgc cggcggcatt ggcaaccagc acatccccgg 1741 cgacaatggc atctatgtga ccaagctgat ggacggcgga gcggcgcagg tggacggacg 1801 tctcaatatc ggcgacaaac tcattgcagt gcgcaccaat gggagcgaaa agaatctgga 1861 gaacgtaacg cacgaactgg cggtggccac gctaaaatcg atcaccgaca aggtgacgct 1921 gatcattggg aagacgcagc acctgaccac cagtgcgtct ggcggcggag gaggaggcct 1981 ctcatccgga cagcagttgt cgcagtcgca gtcgcagttg gccaccagcc agagccaaag 2041 tcaggtgcac cagcagcagc agcagcatca gacgccgatg gtcaattcgc agtcgacaga 2101 gcccggctcg cgatatgcct ccacaaatgt cctggccgcc gttccgccag gaactccgcg 2161 cgcagtcagc accgaggata taaccagaga accgcgcacc atcaccatac agaagggacc 2221 ccagggcctg ggcttcaata tcgttggcgg cgaggatggc cagggcatct atgtgtcctt 2281 catcctggcc ggcggtccag ccgatctcgg atcggagctg aagcgcggcg accagctgct 2341 cagcgtgaac aatgtcaatc tcacgcatgc cacccacgag gaggcggccc aggcgctcaa 2401 gacttctggc ggcgtggtga ccctgctggc gcagtaccga cccgaggagt acaaccgctt 2461 cgaggcgcgc atccaggagc tgaaacagca ggctgccctc ggcgccggcg gatcgggaac 2521 cctgctgcgc accacgcaga agcgatcgct ctatgtgcgc gccctgttcg actacgatcc 2581 caatcgggac gacggcctgc cctcgcgggg attgcccttc aagcacggcg acatcctgca 2641 cgtgaccaat gcctccgacg acgaatggtg gcaggcgcga cgcgttctcg gcgacaacga 2701 ggacgagcag atcggcattg tgccgtcgaa gaggcgctgg gagcgcaaga tgcgggctcg 2761 ggatcgcagc gtcaagttcc agggccatgc ggcagccaat aataatgtgg ataagcaatc 2821 gacattggat cgaaagaaaa agaatttcac attctcgcgc aaatttccgt ttatgaagag 2881 tcgcgatgag aagaatgaag atggcagcga ccaagagccc tttatgcttt gctacacaca 2941 agacgatgcc aatgctgaag gaggcgagat tatctacagg gtggagttac ccgatatgga 3001 gcagataact ctgatctact tggagaatag tgatgcggac tatcgtaagt cgagcatctg 3061 aacaaccaac aatcacaaaa ataaaaaaaa aaaacaacca caagaaccaa cagcaaaata 3121 ttaaaaaaaa aaacaagtct attctctttt tgtaatacta gtgaaagtta caacaaagct 3181 tatgttttct tctacttaaa aaccaaaaaa ctaaaaacca aaaaaaaaaa aaacgaaaga 3241 atgaaagtta aatatttagt tatgaaaaca aagaaacaaa attttgcaag atcaattcct 3301 cttggttata tttttcgttc tttccttgat ttctgcctat ctcttgcttt gtctctctca 3361 ctcatgctgt ctcactccat ctctctgtct ctctctttct ctcgctctct gctatacatc 3421 tatctctatc gcgttttgtc cttagagaat ataaacttta aaaatatgta actttccgaa 3481 aggctttcag tagatcttgt ctttctttcc atcattattt tcattttgta taactgagtt 3541 taaacctagg ataagcctga aactctcttc ttgcaagtag aaccatattt tttatactgg 3601 cagagaaatt tcgttgatat ttaactatca tctaagacaa tcattatata agattaaact 3661 gaaaaaccaa ttcctggaca cacaacttga acaccgaata ttttgttgat catcgacctc 3721 atggtttgct tatgagttct taaactgttg tgaattgtgt tgatagttgc gtagaatcga 3781 atgatgatag atgataattt tgtgaatcca ccaaaaagaa cacacaactg aaacactcac 3841 acctgtatct gtatagtttg cctatttcta cttttatcct tttcctcttt ttctttttgg 3901 ttgccacatt gcatagtttc acccgagcag taacagaaaa gttgaccaaa ggatgcgaag 3961 atccttagag aaccctcttc ttttttttgt gatccttctg cctggatagt tgtttgtccc 4021 cgtccccttc ttagttctta gttagccaaa gaacacccac tcactttgcc ccgtcacaca 4081 tctatatata gattttgtat atagagtact ggatcgattc gaattcagtt tggtttgccg 4141 tttgattttc atgtattgct cgtctcgtgt cgcgtctttt gcatgtgcca cccgcctccc 4201 gaaccaccgc aaaaattgtt tctattcgag agggaaaata atatcagatt aagagaaccc 4261 ttcagagata ttttgtgaat taatcgcggg ttaagatgaa actactgaat aaaggaattg 4321 tacaaatcga gggagtttta tttgccttaa tcgatcagtt gttaatatcc aacccgtagc 4381 actcaacgta cgtgtgtctg taaatctata aattctacga ggcgtcaagt gagtaaaacc 4441 ccataatttc ccccttgaat ggtaaagagg aaagccaaaa aagaaatcca ataactgggt 4501 tctcatccaa cgccaaaatc taatcaccta agctagttct aatgatctca acataactat 4561 taccgtatac acccactcat aacacagagt ttcctaattc atgttgtcca attctttgtg 4621 tgccatgtat gtatgtaaga tcatgatgtc atgtatgtag tatgtaaccg tgtaaggcct 4681 tacccagtgt gcccactgtc tgttaactgt ttgctcgtag atcgcctgct ctatatgtct 4741 acatagccat catttctata tcctatatag tctatatggt atatagtata gttaccattc 4801 cgcatattgc attcacattg gttttttcgg ttcgatttcg tttttaagtt ttgatatcat 4861 ttcattgtat accctaagtt ttaagtgact tcttcttagg aacccccgaa ttattgcctt 4921 gattatgagt tttataagtt ttgcgccgcg cctcggtgaa tgcttgataa gtgaattaag 4981 tgaaacttga caagtattcg cttttaattt agtaaaattg caatttatac tgtacatttt 5041 tctgtgtgcg agagcttaaa ttaaacgaac ctaacttaga gatacaaact cttccactat 5101 tcccccctcc aaaataaccg tagaaagcaa ttgtatactt ctcttctaat tctaactgac 5161 ttgccgataa taataatata acccaatcca gttgcaatcc atagaccgaa atagatattt 5221 gttttgtaga gtacccaagt taatttctct aaagaaaaaa aaaagaaaaa aactattcca 5281 ttccgaaccc gaatcccaat ccgattccca ctcatttaga aaacactttg cgatgac