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LOCUS XM_017151179 3731 bp mRNA linear INV 09-DEC-2024 (Ocrl), mRNA. ACCESSION XM_017151179 VERSION XM_017151179.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151179.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3731 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3731 /gene="Ocrl" /note="Oculocerebrorenal syndrome of Lowe; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108063899" CDS 695..3259 /gene="Ocrl" /codon_start=1 /product="type II inositol 1,4,5-trisphosphate 5-phosphatase" /protein_id="XP_017006668.1" /db_xref="GeneID:108063899" /translation="MDTASSGDSVPNGTAPAATRTLKDIVKERFKEDETIEYLFEAYQ IKGPEYTNRLLALVSSQSGGTFAIVAFSYLRTPLTSVNELIINKVFAIDHNFQLRQDS KSSITTQQFDLSTAEDGPIKYYYYATEGDHYEEFVAKVISFKSTMTQHDPETVLNFRW LNDYRQIGEVKQELKKRESEYIVYKDIIIYCATWNVNNKTCSDSQNPLRAWLACSEQP PDIYAIGLQELDTPTKAMLNSTQVQALEKHWIDMMMDSVHPDVEYEILMSHRLVATML TVIVRKELRQHIIRCRPKSVARGIFNTLGNKGGVAISLQLNEGNICFVNSHLAAHMGY VEERNQDYNAIVEGIRFDDGRTISDHDHIFWVGDLNYRIQEPPGQQRPGPLSDAQTYE LLLQYDQLRQEMRRGKCFEGYTEGDIKFRPTYKYDPGTDNYDSSEKQRAPAYCDRVLW KGTRIEQLAYNSIMEIRQSDHKPVYAVFRVKIKTRDEVKYKRVQEEVLKAVDKRENDN QPQINVEKTVIDFGTVRFNEATTRDFNVYNNCPLPVDFSFKEKDIHAICEPWLHVDPR QDSLLIDSARSIRLKMHANVRTIAGLLRKIRASDNFDILILHVENGRDIFITVTGDYQ PSCFGLSMETMCRTDRPLSEFSQEQIKQLMNDESPEYRVTMPREFFLLIDYLYRQGSK QVGAFPSYDARLSLGAQFNAVRDWLDTWSDEPFPANAETAAQALLLLLDLPEQALLEP VVENLLECSNKSQAMDYISLLSPPKRNVFMHLCMFLRAGIESQYYDLHQVASTFGRIL LRSTERAAWMDYHSRCIQFMRLFIDSDAETVGNGNEGAGTGTGTGSGSGARAGLQA" misc_feature 767..1180 /gene="Ocrl" /note="Type II inositol 1,4,5-trisphosphate 5-phosphatase PH domain; Region: INPP5B_PH; pfam16776" /db_xref="CDD:465268" misc_feature 1253..2134 /gene="Ocrl" /note="Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins; Region: INPP5c_INPP5B; cd09093" /db_xref="CDD:197327" misc_feature order(1277..1279,1283..1285,1376..1378,1385..1387, 1391..1393,1400..1402,1592..1594,1610..1615,1673..1675, 1682..1687,1796..1798,1802..1804,1808..1810,1964..1969, 2006..2008,2012..2014,2030..2032,2102..2107) /gene="Ocrl" /note="putative active site [active]" /db_xref="CDD:197327" misc_feature order(1277..1279,1376..1378,1673..1675,1796..1798, 1802..1804,2030..2032,2102..2107) /gene="Ocrl" /note="putative catalytic site [active]" /db_xref="CDD:197327" misc_feature order(1283..1285,1376..1378,2102..2104) /gene="Ocrl" /note="Mg binding site [ion binding]; other site" /db_xref="CDD:197327" misc_feature order(1376..1378,1385..1387,1391..1393,1400..1402, 1592..1594,1610..1615,1673..1675,1682..1687,1808..1810, 1964..1969,2006..2008,2012..2014,2102..2104) /gene="Ocrl" /note="putative PI/IP binding site [chemical binding]; other site" /db_xref="CDD:197327" misc_feature order(1673..1675,1802..1804,2105..2107) /gene="Ocrl" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197327" misc_feature 2540..3169 /gene="Ocrl" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and...; Region: RhoGAP_OCRL1; cd04380" /db_xref="CDD:239845" misc_feature order(2756..2758,2873..2875,2897..2899,3059..3061, 3068..3073,3140..3142) /gene="Ocrl" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239845" misc_feature 2756..2758 /gene="Ocrl" /note="catalytic residue [active]" /db_xref="CDD:239845" polyA_site 3731 /gene="Ocrl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atttccgggc atttgcaaac tggtcaccga gcccattgcc cggaaaataa atcgaaacaa 61 ataataaaat tacgccagta attagggtct tgcgggtgtt tgtgccccgt gttgagtgtg 121 tttcctggcc accccgcacc cggtcagccg gtggagattc gcccagcaat tattaccatt 181 gtcatcgcat tcgcatttcc actgatgaat aagtgcccct gtgcgcgcgt gtgtgtgtgc 241 gtgcgataca cccaccttga gggagcacga caacaacagt aaatcaagcg agaagacgga 301 aaactgaaaa caaacacggg gctgcgactg catacattcc ggttattcca cggttacgca 361 gcccaagagc agggtcaccc cgtcacctgg ccaccagaaa ccagaagccc agcaaagaac 421 acttccaatc cgaccccgta atacatcaca caccatatag cccatacgaa tacgaatacc 481 actttgctgg gcgttcgcgc caactataaa tagaaaaagc aacaacgcag cagcaacagc 541 acagcacagc aaacaactgt ccatatccct atctacatac atttatcgac tcgacgcaga 601 agaagaacca cccaagtatt actgcaatct tcattccgag attaagggag ccagcaggcg 661 gaggaggaag cataaccata accacatcag gaaaatggac acggcgagct caggggacag 721 tgtgcccaat ggaaccgctc ctgcggccac caggacgctc aaggacatcg tcaaggagcg 781 gttcaaggag gacgagacca tagaatacct attcgaggct tatcagatca aggggccgga 841 gtacaccaac cggcttttgg cgctggtttc ctcacagtcg ggcggaacct tcgccatcgt 901 cgccttctcc tacctgcgca ctccgctgac ctccgtgaac gagctgatca tcaacaaggt 961 gttcgccatc gaccacaact tccagttgag gcaggatagc aagagctcca tcaccacgca 1021 gcagtttgac ctgtccacag ccgaggatgg gcccatcaag tactactact acgccacaga 1081 gggcgaccac tacgaggagt tcgtggccaa ggtgatctcc ttcaagagca ccatgaccca 1141 gcacgacccc gagacggtgc tcaacttcag gtggctcaac gactaccggc aaatcggaga 1201 ggtgaagcag gagctgaaga agcgggagag cgagtacatt gtctacaagg atatcatcat 1261 ctactgcgcc acgtggaatg tgaacaacaa gacctgcagc gacagccaga acccactgag 1321 agcctggctg gcgtgcagtg agcagccgcc ggacatctat gccatcgggc tgcaggagct 1381 ggacactccc accaaggcca tgctcaactc cacccaggtg caggccctcg agaagcactg 1441 gatcgatatg atgatggaca gcgtccaccc ggacgtggag tacgagatcc tgatgtcgca 1501 ccgcctggtg gccaccatgc tgacggtcat cgtgcgcaag gagctgcggc agcacatcat 1561 ccgctgccgc cccaagtcgg tggcccgcgg catcttcaac acgctgggca acaagggcgg 1621 cgtggccatc agcctgcagc tgaacgaggg gaacatctgc ttcgtcaact cccacctggc 1681 cgcccacatg ggctacgtgg aggagcggaa tcaggactac aatgccatcg tggagggcat 1741 acgctttgac gacggacgca ccatcagcga tcacgatcac atcttctggg tgggcgacct 1801 aaactatcgc atccaggagc cgcccggcca gcagcgacca ggaccgctga gcgacgccca 1861 gacctacgag ctgctcctgc aatacgacca gctgcgccag gagatgcggc gcggcaagtg 1921 cttcgagggc tacaccgagg gcgacatcaa gttccggccg acgtacaagt acgacccggg 1981 cacggacaac tacgacagca gcgagaagca gcgggcgccg gcctactgcg accgggtgct 2041 ctggaagggg acgcgcatcg agcagctggc ctacaacagc atcatggaga ttcgccagag 2101 cgaccacaag ccggtgtacg cggtgttccg cgtgaagatc aagacgcgcg acgaggtcaa 2161 gtacaagcgg gtgcaggagg aggtgctgaa ggcggtggac aagcgggaga acgacaacca 2221 gccgcagatc aatgtggaga agacggtgat tgacttcgga acggtgcgct tcaacgaggc 2281 gaccacgcgg gacttcaacg tctacaacaa ctgcccgctg cccgtggact tcagcttcaa 2341 ggagaaggac atccacgcca tctgcgagcc ctggttgcat gtcgacccgc gccaggactc 2401 gctgctcatc gactccgccc gcagcatccg tctgaagatg cacgccaatg tgcgcaccat 2461 cgcgggcctg ctgcgcaaga tccgcgccag cgacaacttt gatatactca tcctgcacgt 2521 ggagaacggg cgggacatct tcatcacggt caccggcgac taccagccca gctgcttcgg 2581 cctctccatg gagacgatgt gccgcaccga ccgccccctg agcgagttct cccaggagca 2641 gatcaagcag ctgatgaacg acgagtcgcc ggagtaccgc gtgaccatgc cgcgcgagtt 2701 cttcctgctg atcgactacc tgtacaggca gggctccaag caggtgggcg cctttccgtc 2761 ctacgacgcg cgcctctccc tcggcgccca gttcaacgcg gtgcgcgact ggctggacac 2821 ctggtcggac gagccgttcc ctgccaatgc ggagaccgct gcgcaggcgc tgctgctcct 2881 gctggatctg ccggagcagg cgctcctgga gccggtggtc gagaacctgc tggagtgcag 2941 caacaagtcg caggccatgg actacatctc gctgctgagt ccgcccaagc gcaatgtctt 3001 catgcacctg tgcatgttcc tgcgcgcggg catcgagagt cagtactacg acctgcacca 3061 agtcgcctcc accttcggac gcatcctgct gcgcagcacc gagcgcgccg cctggatgga 3121 ctaccacagc cgctgcatcc agttcatgcg gctcttcatc gactcggacg ccgagacagt 3181 gggcaacggc aacgagggcg ccggaacggg aacgggaaca ggatccggat ccggggcgag 3241 ggccggactg caggcttagt ccgggcgata gttgtacgag tctgttgata gttagtgtta 3301 ggctatttat tttacttgtt ggtactttgt tggcaattag catttatagt ttctctgttt 3361 tacctgttaa ttgtttgtgc ccgccttccg ttcattccaa cttggttgcc ccgccccaca 3421 tcccggttat gtatatcacc tggttgcaat gcaaacatca catcaagtct cgaagcatga 3481 aacttgggat ccatggagga acgggtgcgt gtgcagaggc ccgtggagca ggaggccaac 3541 gtaaaattta aatgtatcat gtaaataggt taaacgaaat gtgctgcaca cccgttaaat 3601 caatgtttag ttgagcacaa tgcttgttag tttagattaa tgaggaattc cgcagggaat 3661 ctcgtgaccc cgtacatccc ggtttcagtt gcaactgaaa ataaataaca ccgttacata 3721 cagtatcaaa a