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LOCUS XM_017151162 1619 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017151162 VERSION XM_017151162.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151162.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1619 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1619 /gene="Dredd" /note="Caspase-8 Dredd; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108063889" CDS 237..1580 /gene="Dredd" /codon_start=1 /product="caspase-8 isoform X2" /protein_id="XP_017006651.2" /db_xref="GeneID:108063889" /translation="MTRSEADFPPSDLLQQYAKSRPDAWRRHLVEALCIVGARQVLRR LGFRWQELRLHYLPHVAEVALHVHPLLKSLYRICEQLTLAQSGRLVLDVGEKVARQQA GDPLRFYDPTYLEIFLLDWLTRGSLRLGDINAAGSDVQLLIEHLKFNDLQEQAKLLID TINSNAPEAAPPAPPLVAIKQETQLDSSASSVSSASSSRRGNALELSREKAGIVLIIN QQRFHRNVSEDLKQYLPSKKLQNRAGTDVDKQRLTEVFSAMNYQVEARDNVDHLDMVQ LVRSACDRSLLQDSLVVCILSHGFEEAVYGANSIALRIADIENVLCSYETLYNKPKLL IIQACQEEALREGEENKPFKIDVTTQSPSQHVNMVRAMSTVNGFSALRHTHSGSWFIQ GLCDAIDQHSASEHIADILTIVTNEVSQKRGKNDESMVPKFNSSFRQHVYFPPRL" misc_feature 849..1571 /gene="Dredd" /note="Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide...; Region: CASc; cl00042" /db_xref="CDD:444667" misc_feature order(960..962,1131..1133,1245..1247,1266..1268, 1371..1388,1398..1403) /gene="Dredd" /note="substrate pocket [chemical binding]; other site" /db_xref="CDD:237997" misc_feature order(1128..1130,1251..1253) /gene="Dredd" /note="active site" /db_xref="CDD:237997" misc_feature order(1350..1352,1359..1361,1368..1370,1437..1439, 1461..1463,1479..1481,1518..1520,1533..1538,1542..1544, 1551..1556) /gene="Dredd" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:237997" polyA_site 1619 /gene="Dredd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actttttcgc tttttcatgc gaatttgatc ttacaaactg gtactttccc gcacaacatg 61 gccggagcga atctgctgac ccagctggac gccatccacc tggacgacct ggtctacgtg 121 gagcgcgacc tgaactttgc ccagaagagc aatccctctt ccaggtgggc ctctgcttcc 181 tgctccacgg ggacgaccac tcgcacgcca cctacatcct gcagaagctg ctggtgatga 241 cgcgatcgga agccgacttc ccgcccagcg atctcctcca gcagtacgcc aaatcccggc 301 cagacgcctg gcggaggcac ctcgtggagg ccctgtgcat tgtgggcgcc cgccaggtgc 361 tgcgccgcct gggcttccgc tggcaggagc tgcggctgca ctacctgccc cacgtcgccg 421 aggtggccct gcatgtgcat ccgctgctga agagtctcta caggatctgc gagcagctga 481 cgctggcgca gagcggtcgc ttggtcctgg atgtgggcga gaaggtggcg cgtcagcagg 541 cgggcgatcc cctgcgcttc tacgatccca cttacctgga gatcttcctg ctggactggc 601 tcaccagggg atccctgcgg ctgggcgaca tcaatgccgc cggcagcgat gttcagcttc 661 tgattgagca cctcaagttc aatgatctgc aggagcaggc caagctgctt atagacacca 721 tcaacagcaa tgccccggag gcggctcctc ctgctcctcc actggtggcc atcaagcagg 781 agacgcaact ggacagctca gccagctcag ttagctcagc cagctcctcc cggcgaggga 841 atgccctcga gctgagtcgc gagaaggcgg gcatcgtgct gatcatcaac cagcaaaggt 901 tccaccgcaa tgtcagcgag gatctcaagc aatacctgcc gtctaagaag ttgcagaacc 961 gcgcaggaac ggatgtggat aagcaaagac tgaccgaggt cttctccgcg atgaactacc 1021 aggtggaggc gcgcgataat gtggatcatt tggacatggt gcagctcgtg cgcagtgcct 1081 gcgacagatc cctgctgcag gactcgctgg tcgtgtgcat cctgagccac ggcttcgagg 1141 aggccgtcta cggggccaac agcatcgccc tgcggatagc ggacatcgag aacgtgctct 1201 gcagctacga gacgctgtac aacaagccca agctgctcat catccaggcc tgccaggagg 1261 aggcgctccg ggagggcgag gaaaacaagc cattcaagat cgatgtgacc acccagtcgc 1321 ccagtcagca tgtcaacatg gtgcgcgcca tgtccacggt gaacggattc tccgccctgc 1381 ggcacacgca ctcgggcagc tggttcatcc aggggctctg cgatgccatc gatcagcact 1441 ccgccagcga acacattgcc gacatcctga ccatcgtcac caacgaggtt tcccagaagc 1501 gcggcaagaa cgacgagtcc atggtgccca agttcaacag ctcgtttcgc cagcacgtct 1561 actttccacc tcgcctgtga ttgcaatatt atttcgttaa ataaaagtgt ctaaagtta