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LOCUS XM_017151123 7085 bp mRNA linear INV 09-DEC-2024 alpha (Pi4KIIIalpha), transcript variant X2, mRNA. ACCESSION XM_017151123 VERSION XM_017151123.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151123.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7085 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7085 /gene="Pi4KIIIalpha" /note="phosphatidylinositol 4-kinase III alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063860" CDS 365..6751 /gene="Pi4KIIIalpha" /codon_start=1 /product="phosphatidylinositol 4-kinase alpha isoform X2" /protein_id="XP_017006612.2" /db_xref="GeneID:108063860" /translation="MTMTASDKYTYQRTVLCLARVLAGIQPTPWEKVQTLFRYCPQEN AAGVFCLDTRAQDAVIALGIYYLEGGCQHEGQIVPYLLRLAKCLPKAVWIDDARSNKV ERIRIPSAEKFSFCLNTLLSDIAAKCPDSREEIILNQVETLSALANIVKSSRDSSSAP PPIILCKATVPLLFGLARSMGRYASNDPPLLCRIFPPELLPIQKGGGRDGTGGSSSSA SGTCGGSFSSSERLAGATHQFRPIIPRSMSGSLAQAQAQANQNHEDARQGKCHQGSKH QKPSLHSYFSVPYDPRTHFFTRYGSSFNQFPNMRVCESPTKGGPRPLYRVPPFPIQHL QTIFAVSKKLLTKDTLEHLDEQASDIFSLHQIKGYCYKSFSETLNLVLVTLLRELLQH QVDLPTPFTKDVQEFVKRLFLNGQTELQNKQQDQERERREENGIAVVNKYKVNVMANA ACVDLLVWAIRDETEADKLCGRLSQKLNLELSHKIVMDHMPLLMVCLEGLGKLAHKFP NIAGTSISYLRDFLVAPSPILNKLHDHAMQSLAQQKKEKELTPFKIAVQHSDSRTAVV IYGDNQKQPSSGTGRSGHAAFEALRDAAIENLSIALRAAHTLDQFCVPALVANVSNRL FTAEKSGSESQGECHKSNLVSLNIIVMLGHVAVALKDTSKTTQNILQFFIQRFCKVPS EQNALIVDQLGCMIISQCETHVFDEIMKMFSRVTVQSASLAYTSDPEHRKQFHHVSDA VVNALGNIAANIQGDAEMLELLGKLLELFVQIGLDGERSYDNTPGAQKASSRAGNLGM LIPVIAVLVRRLPPIKNPRQRLHKLFKDFWAYCVVMGFTNARLWPADWYQGVQQIAAK SPLLISQTAHKSDMRELNYTLAIKSDSVNELRSQILVLLEHSSDNVATAINKLSFAQC TYLLSVYWLEMLRVENADEPSLEPIMSYLCDTALQRDKTGIWQCVKCVADQVFEKFRN VLYAHDEIREKVLESQATLLLVYFNHIHKPIQVVADQYLSFLVDRFPHLLWNRRVLWC MLDILQLLAYSLSLDPNEETPTLRVVSTPYTLQLMDSLPARELRLKDFADRCQGIVNE AMKWAPRSTRSHLQEYPNQIPTPVLAHHSGLALAFDSVISSSSSLQTKRPSCVNSDTP RFVSVLCLRSKYAGEISGLLSVLSEKDKAGLADRLVSDVWEACGEKSDARHRGALWRA TAYLIICSEIDRKLLHAVASSQLELFTESAMETAVECWQWVLTARQDLELCFIQEMVS AWQTTFEKRMGLFQWETEVTNPLAAYEGCKLVSKPILITPHLIWLQLLSEMVDTAKYC NRDKVEMFCLLLHRCLPILKSSRQNRQVSTVGCRFKLLQCGLSLLQGNTIPKSLARNI LRERIYSNALDYFCGPPTCPNQSREQLLEDIQILLKFWQTMRSEKKHLVTSEVGDYDL TNASVSSTQMLAVRHNPETASLISGSGLVNDYTRSMSASGNAVGSSGWYNTIPHSTST LSKRSNRSKRLQYQKDSYDKDYMKKRNLILELLAVELEFLLTWYNPNCLPDLIIPGEE QITEWRNRPYKPNVWRDYARLAWCYNPSLAVFLPQRIKNAEIIDEEVSRLVCSDPIAV CHIPEALKYLCTTKNLLQESPDLVYILSWSPVTPIQALAYFSRQYPSHPLTAQYAVKT LSSYPAESVLPYIPQLVQALRHDTMGYVVEFIRNISRRSQIVAHQLIWNMQTNMYMDE DQQHRDPNLYEALDQLSLSIIASFSGAAKRFYEREFDFFGKITAVSGEIRSFAKGIER KNACLAALSRIKVQGGCYLPSNPEAMVLDIDYSSGTPMQSAAKAPYLARFRVYRCGIT ELETRAMEVSNNPNSQEDAKMTLGVESWQAAIFKVGDDVRQDMLALQVITIFKSIFQQ VGLDLFLFPYRVVATAPGCGVIECVPNAKSRDQLGRQTDSGLSEYFQHQYGDESSKEF QAARANFVKSMAAYSLIGYLLQIKDRHNGNIMIDKDGHIIHIDFGFMFESSPGGNIGF EPDMKLTDEMVMIMGGKMDSPAFKWFCELCVQAFLAVRPYQDAIVSLVSLMLDTGLPC FRGQTINLLKQRFVATKNNKEAAAHMLAVIRNSYQNFRTRTYDMIQYYQNQIPY" misc_feature 1541..4999 /gene="Pi4KIIIalpha" /note="PI4-kinase N-terminal region; Region: PI4K_N; pfam19274" /db_xref="CDD:437106" misc_feature 5084..5611 /gene="Pi4KIIIalpha" /note="Phosphoinositide 4-kinase(PI4K), accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases. Its role is unclear but it has been suggested to be involved in substrate presentation. PI4K phosphorylates hydroxylgroup at position 4 on the...; Region: PI4Ka; cd00871" /db_xref="CDD:238443" misc_feature 5792..6745 /gene="Pi4KIIIalpha" /note="Catalytic domain of Type III Phosphoinositide 4-kinase alpha; Region: PI4Kc_III_alpha; cd05167" /db_xref="CDD:270711" misc_feature order(5828..5830,5834..5839,5843..5845,5849..5851, 5984..5986,5990..5992,5999..6001,6092..6094,6128..6139, 6152..6154,6161..6163,6326..6328,6332..6334,6362..6367) /gene="Pi4KIIIalpha" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270711" misc_feature 6302..6328 /gene="Pi4KIIIalpha" /note="catalytic loop [active]" /db_xref="CDD:270711" misc_feature order(6365..6397,6404..6415,6416..6433) /gene="Pi4KIIIalpha" /note="activation loop (A-loop); other site" /db_xref="CDD:270711" polyA_site 7085 /gene="Pi4KIIIalpha" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgggtggaaa acgagttggc agcactattt ggatgtcttg tatataataa taatttattt 61 aataatatat atattgtata taatataata taatatatta ttacatataa ttatcgcagt 121 ccgccactcc gtcgaccagc ttcgtggccg aaacaacaaa aaacgctgcc ccagaaaata 181 gtaatttttg cgagcgaatt ccaaagatga cgacgaacgc ctagcgagat tgttcgcgtc 241 aaccaggaga accgaaccga aacgaaacga acgaacggag gaggagcagg tggccgccag 301 tgggaggagg aggaggagga gcagcgagcg agcgaggagc gggagcggga gcgggaacgg 361 agcaatgacg atgaccgcct cggataaata cacgtaccag cggacggtcc tgtgcttggc 421 ccgcgtgctg gcggggatcc agcccactcc ctgggagaag gtgcagaccc tgttccgata 481 ttgcccgcag gagaatgccg ccggggtgtt ctgcctggac acgcgggccc aggatgccgt 541 gatcgccctg gggatctact atttggaggg aggctgccag cacgagggcc agattgtgcc 601 ctacctgctg cgcctggcca agtgcctgcc caaggcggtc tggatcgatg atgcgcgcag 661 caacaaagtg gaacgtattc gcattccctc ggctgagaag ttcagcttct gcctgaacac 721 cctgctctcc gacatagcgg ccaagtgccc ggattcccgc gaggagatca tcctcaatca 781 ggtggagacg ctgagtgccc tggccaacat agtcaagtcg agcagggaca gcagctcggc 841 cccgcctccg attatcctgt gcaaggccac ggtgccgctg ctctttggac tggcccgctc 901 gatgggtcgc tatgccagca acgatcctcc gctgctctgc cgcatctttc cgcccgagct 961 gctgcccatc cagaagggcg gcggacgcga cggcaccggc ggctcgagca gcagtgccag 1021 cggcacctgc ggcggctcct tcagcagcag cgagcgactg gcgggcgcca cgcaccagtt 1081 ccgacccatc ataccgcgct ccatgtcggg cagcctggct caggcgcagg cgcaggccaa 1141 ccagaaccac gaggatgcga ggcagggaaa gtgccaccag ggaagcaagc accagaagcc 1201 ctcgctgcac agctacttct ccgtgccgta cgacccgcgg acgcacttct tcacgcgcta 1261 cggctccagc ttcaaccagt tccccaacat gcgcgtctgc gagtcgccga cgaagggcgg 1321 cccgcgtccc ctgtaccgcg tgccgccgtt ccccatccag cacctgcaga ccatattcgc 1381 ggtgtccaag aagctgctca ccaaggacac gctggagcac ctggacgagc aggccagcga 1441 catcttctcg ctgcaccaga tcaagggcta ctgctacaag agcttctcgg agacgctgaa 1501 tctggtgctg gtcaccctgc tgcgcgagct gctgcagcat caggtggacc tgccgacgcc 1561 cttcaccaag gacgtgcagg agttcgtgaa gcggctgttc ctgaacgggc agacggagct 1621 gcagaacaag cagcaggatc aggagcgcga gcggcgcgag gagaacggca tcgcggtggt 1681 caacaagtac aaggtcaatg tgatggccaa tgcggcgtgc gtcgatctgc tggtttgggc 1741 cattcgcgac gagacggagg cggacaagct gtgcggccgg ctgtcgcaga agctgaacct 1801 ggagctgagc cacaagatcg tgatggacca catgccgctg ctgatggtct gcctggaggg 1861 tctgggcaag ctggcccaca agtttcccaa catagccggc acctcgatct cgtatctgcg 1921 cgacttcctg gtggcgccca gtccgatcct caacaagctc cacgaccacg ccatgcagtc 1981 gctggcccag cagaagaagg agaaggagct gactccgttc aagatcgctg tccagcactc 2041 ggactcgagg acggcggtcg tgatctacgg ggacaaccag aagcagccga gctcgggcac 2101 cggaagaagt ggtcatgccg ccttcgaggc tctgcgcgat gcggccatcg agaatctgtc 2161 gattgccctg cgagctgccc acactctgga ccagttctgt gtccccgccc tggtggccaa 2221 cgtgtccaat cggctcttca ccgccgagaa gtctgggagt gaatcgcagg gcgagtgcca 2281 caagtcgaac ctggtcagcc tgaacatcat cgtgatgctg ggccacgtgg ccgtggcgct 2341 gaaggacacc tcgaagacga cgcagaacat cctgcagttc ttcatccagc gcttctgcaa 2401 ggtgccctcg gagcagaacg ccctgatcgt cgaccagctg ggctgcatga taatctcgca 2461 gtgcgagacg cacgtcttcg acgagatcat gaagatgttc tcgcgcgtca ccgtgcagtc 2521 ggcctcgctg gcctacacct cggatccgga gcaccgcaag cagttccacc acgtctccga 2581 tgcggtggtc aatgccttgg gcaacatagc ggccaacatt cagggcgacg ccgagatgct 2641 ggagctgctg ggcaagctgc tcgagctgtt tgtgcagatc gggctggacg gcgagcgcag 2701 ctacgacaat acaccgggcg cccagaaggc cagctcgcgg gccggcaatc tgggcatgct 2761 gataccggtg attgcggtac tggtgcgccg cctgccgccg atcaagaatc cccgccagcg 2821 gctgcacaag ctcttcaagg acttctgggc ctactgcgtc gtgatgggct tcaccaatgc 2881 ccgtttgtgg ccggccgact ggtaccaggg tgtccagcag atcgcggcca agtcgccgct 2941 gctcatctcg cagacggccc acaagtcgga catgcgggag ctcaactaca cgctggccat 3001 caagagcgac tcggtgaacg agctgcgcag ccagatcctc gtgctgctcg agcactcctc 3061 ggacaacgtg gccacggcca tcaacaagct gtcctttgcc cagtgcacct acctgctgag 3121 cgtctactgg ctggagatgc tgcgcgtgga gaacgcggat gagccgagtc tggagcccat 3181 catgagctac ctttgcgaca cggctctgca gagggacaaa acgggcattt ggcagtgcgt 3241 caagtgcgtt gccgaccagg tcttcgagaa gttccgcaac gtgctgtacg cccacgacga 3301 gatccgcgag aaggtgctgg agtcgcaggc caccctgctg ctggtctact tcaaccacat 3361 ccacaagccc atccaggtgg tggccgatca gtatctctcc ttcctggtcg accgttttcc 3421 ccacctcctc tggaatcgcc gcgtgctctg gtgcatgctg gacatcctcc agctgctcgc 3481 ctactccctt agcctggatc ccaacgagga gacgcctacg ctgcgggtgg tgtccactcc 3541 ctacacgctg cagctgatgg actcgctgcc cgcgagggag ttgcgcttaa aggactttgc 3601 cgatcgctgt cagggcatcg tgaacgaggc catgaagtgg gctcctcgct ccacgaggtc 3661 gcatttgcag gagtatccca accagatacc cacgcccgtg ttggctcacc acagcggact 3721 ggctttggcc ttcgattcgg tgatcagcag cagcagtagc ctacaaacca aacggcccag 3781 ctgcgtcaac tcggacacgc cgagattcgt ctcggtcctc tgcctgcgca gcaagtacgc 3841 cggcgagatc agcggcctgc tgtccgtgct gagcgagaag gacaaggcgg ggctcgcgga 3901 tcggctggtc agcgatgtgt gggaggcctg cggcgagaag agcgacgccc ggcatcgcgg 3961 agctctgtgg cgagccaccg cctacctgat catctgctcg gagattgaca ggaagctcct 4021 gcatgccgtg gccagttcgc agctggagct gttcaccgag tcggcgatgg agacggccgt 4081 cgagtgctgg caatgggtgc tcacggctcg acaggatctg gagctgtgct tcatccagga 4141 gatggtcagc gcctggcaga cgacgttcga gaagcgaatg ggcttgtttc aatgggaaac 4201 ggaggtcacc aacccgctgg ccgcctacga gggctgcaag ctggtcagca agcccatcct 4261 aataaccccc catctcatct ggctgcagct gctctccgag atggtggaca cggccaagta 4321 ctgcaaccgg gacaaggtgg agatgttctg cctgctgctg caccgatgtc ttcccattct 4381 gaagagcagc cggcagaacc gccaggtgtc cacggtgggc tgtcgcttca agctgctgca 4441 gtgcggcctc tcgctgctgc agggcaatac gatacccaag tcgctggcca ggaacatcct 4501 gcgcgagagg atctactcca atgccctgga ctacttctgc ggcccaccta cctgccccaa 4561 tcagagcagg gagcagctgc tggaggacat acagatactg ctcaagttct ggcagacgat 4621 gcgcagcgag aagaagcacc tggtcacctc cgaggtgggc gactacgacc tcacgaacgc 4681 ctctgtcagc tccacccaga tgctggccgt gcgccacaac ccggaaacgg cctccctgat 4741 cagcggcagt ggcctggtca acgactacac ccgctccatg agcgccagcg gcaatgcggt 4801 gggcagcagc ggctggtaca acaccattcc ccactcgacc tccaccctgt ccaagcgttc 4861 gaatcgctcc aagcggctgc agtaccagaa ggactcgtac gacaaggact acatgaagaa 4921 gcgcaatttg atcctcgagc tgctggccgt cgagctggag ttcctcctga cctggtacaa 4981 cccgaattgc ctgccggatc tgataattcc cggcgaggag cagatcaccg agtggcgcaa 5041 ccggccgtac aagccgaacg tctggcggga ctacgcccgc ctcgcctggt gctacaatcc 5101 ctcgctggcc gtcttcctgc cgcagcgcat caagaacgcg gagatcatcg acgaggaggt 5161 gtcgcggctg gtctgctccg atcccatagc cgtttgtcat ataccggagg ccctgaagta 5221 cctgtgcacc accaagaacc tgctgcagga gagccccgat ctggtgtaca tcctctcctg 5281 gtcgccggtg acgcccatcc aggcgctggc ctacttctcg cgccagtatc cctcgcaccc 5341 gctgaccgcc cagtacgcgg tgaagacgct ctcctcgtac cccgccgaat cggtgctccc 5401 gtatatcccg cagcttgtgc aggccctgcg gcacgacacc atgggctatg tggtggagtt 5461 cataaggaac atctcgcggc gctcgcagat cgtggcgcat cagctgatct ggaacatgca 5521 gacgaacatg tacatggacg aggaccagca gcacagggat cccaatctct acgaggcctt 5581 ggatcagctg tcgctcagta ttatcgcctc gttctcgggc gccgccaagc ggttctacga 5641 gcgcgagttc gactttttcg gcaagataac cgccgtctcc ggggaaattc gctcctttgc 5701 caagggcatc gagcgcaaga acgcctgcct ggcggcgctc agccggatca aggtgcaggg 5761 cggctgctac ctgccctcca atccggaggc catggtcctg gacatcgact acagcagcgg 5821 cacgcccatg cagagtgccg ccaaggcgcc gtacttggcc cgcttccggg tgtatcgctg 5881 cggcatcacg gagctggaga cgcgcgccat ggaggtgtca aataatccga actcccagga 5941 ggacgccaag atgacgctgg gcgtcgagtc ctggcaggcg gccatcttca aggtgggcga 6001 cgatgtgcgc caggacatgc tggccctcca ggtgatcacc atcttcaaga gcatcttcca 6061 gcaggtggga ctcgacctct tcctgttccc ctaccgcgtg gtggccaccg ctccagggtg 6121 cggcgtcatc gagtgcgtgc cgaatgccaa gtcgcgggat cagctcggcc ggcagacgga 6181 cagcggactc tcggagtact tccagcacca gtacggcgac gagagctcca aggagttcca 6241 ggcggcccgg gccaactttg tcaagtcgat ggccgcctac tcgctgatcg gctatctgct 6301 ccagattaag gatcgccaca atggcaacat catgatcgac aaggatggcc acataataca 6361 catagatttt ggcttcatgt tcgagtcctc gccgggcggc aatatcggct tcgagcccga 6421 tatgaagctg accgacgaga tggtcatgat catgggcggc aagatggact cgccggcctt 6481 caagtggttc tgcgagctgt gcgtgcaggc cttcctcgcc gtgcggccct accaggatgc 6541 gattgtctcg ctggtctccc tgatgctgga caccgggctg ccgtgcttcc gcggccagac 6601 gatcaacctg ctgaagcagc gcttcgtggc caccaagaac aacaaggagg cggccgccca 6661 catgctggcc gtcatccgaa actcgtacca gaacttccgc acgcgtacct acgacatgat 6721 ccagtactac cagaaccaga taccctacta aataatcaag tgaaaccgga accccaatac 6781 aggcgcctca tgttcgttgt tcgttggcca aaagacactt aagaatacac tacgcaacct 6841 acaaaaatcc gcaatccgta atccggaatc cgaaatccct tatccgtatt attaatgttt 6901 tgtcgccgca cccgtattcg tattccttaa cctttatccc gtaatttccg agagtgtgtt 6961 tctttctgtt tcgcgtactt ataagatgtt gaactttttc caagatttta cgacgcatat 7021 attcgttata caatatttat aaatattaaa tcaattatag ggcaatatgt tatataatgg 7081 taaaa