Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017150999 2201 bp mRNA linear INV 09-DEC-2024 factor 2B subunit epsilon (eIF2Bepsilon), mRNA. ACCESSION XM_017150999 VERSION XM_017150999.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017150999.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2201 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2201 /gene="eIF2Bepsilon" /note="eukaryotic translation initiation factor 2B subunit epsilon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108063791" CDS 82..2097 /gene="eIF2Bepsilon" /codon_start=1 /product="translation initiation factor eIF2B subunit epsilon" /protein_id="XP_017006488.2" /db_xref="GeneID:108063791" /translation="MAQFEKEIVQAVLIADNNVWNFKPLSDEGSTALLPLVNVRMLDY ALIALNRSGVEEVFVYASLYLQDIRDHIKAGIATYASWSFKMTVHVIGGEGCRCFGDA MRDLDAKALIRGHFILLGADTVTNADLRPVLEQHKRQAKFDKGTAATLVFKECASHGR TGNELLIAVDRRNDRLHYHQRLRTHQKEPRYQIPLDVFLGNACVALHHKLLDPQIAIG SPSMLSLFSDNFDFQTRDDFVRGLLINEELLDSRIYVALLPAAQYAHKVNSWPAYQLV SRDIINRWAYPLVPDMGVYKLQQQYVFHRDNIYKSPGAQVSKVALHQNVVIQAGSRVD TGSLIGDSVIGANCRIGRNCRLTNVFLMADVVVGDNCRLEHCVVGAGATVNENCDVSA GCVLGAGSELPAGTTLARTLVTSTPSTQRGEEEAVAVELESLGPRAFIVSDLTTGDPE DSEGEDLLPQQPLSIPKMGDLPAPLDEISDCSDLSEDDEDASRAVTPLPDDTNIFLGE VIDSLTRGFREKSNPDFLILEINSSRYAYNMSLKEVNFNVVKAVFGMQSIVEPANNNV LVAINAAFKQLGPVVSNYIKSEEAMLDCLKALEDVYEENPLVREKISQIVHYLYDKDF VSEDAIQGWFEQLDEEEHGHLRQSLAKLVAWLDQSSEEDDDDEEEED" misc_feature 106..750 /gene="eIF2Bepsilon" /note="The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2; Region: eIF-2B_epsilon_N; cd04197" /db_xref="CDD:133040" misc_feature 1057..1278 /gene="eIF2Bepsilon" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:469633" misc_feature order(1093..1095,1099..1101,1108..1110,1114..1116, 1144..1146,1159..1161,1165..1167,1195..1197,1207..1212, 1216..1218,1246..1248,1264..1266,1270..1272,1276..1278) /gene="eIF2Bepsilon" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100061" misc_feature order(1195..1197,1201..1206,1216..1218,1252..1254, 1276..1278) /gene="eIF2Bepsilon" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100061" misc_feature 1579..2061 /gene="eIF2Bepsilon" /note="C-terminal W2 domain of eukaryotic translation initiation factor 2B epsilon; Region: W2_eIF2B_epsilon; cd11558" /db_xref="CDD:211396" polyA_site 2201 /gene="eIF2Bepsilon" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actgttgtta tcgcaatcgc aatcgcgtgg ggaaacgctc caagtcccca aaaaccgaaa 61 tccaagagga aagccgagga aatggcccag ttcgagaagg aaatcgtgca ggcggtgctg 121 atagccgaca acaatgtgtg gaacttcaag ccgctctccg acgagggctc cacggctctg 181 ctgccgctgg tgaacgtgag gatgctggac tacgcactca tcgccctcaa ccgcagcggc 241 gtggaggagg tgttcgtgta cgccagcctc tacctgcagg acatccggga tcacatcaag 301 gctggcattg ccacgtacgc ctcctggtcc ttcaagatga ccgtccacgt gatcggcggc 361 gagggctgcc gctgcttcgg cgacgccatg cgcgacctgg acgccaaggc gctgatccgc 421 ggccacttca tcctgctggg cgccgacacg gtgaccaacg ccgacctgcg cccggtgctg 481 gagcagcaca agcggcaggc caagttcgac aagggcacgg ccgccacgct ggtgttcaag 541 gagtgcgcca gccacgggcg caccggcaac gagctgctga tcgccgtgga ccgccgcaac 601 gaccggctgc actaccacca gcggctgcgg acgcaccaga aggagccgcg ctaccagatc 661 ccgctcgacg tcttcctggg caacgcgtgc gtggcgctgc accacaagct gctcgatccg 721 cagatcgcca tcggctcgcc gtccatgctc tccctgttca gcgacaactt cgacttccag 781 acgcgcgacg acttcgtgcg cggcctgctg atcaacgagg agctgctgga cagccgcatc 841 tacgtggccc tgctgccggc ggcccagtac gcgcacaagg tgaacagctg gccggcctac 901 cagctggtca gccgggacat cattaaccgc tgggcctacc cgctcgtgcc ggacatgggc 961 gtctacaagc tgcagcagca gtacgtcttc caccgggaca acatctacaa gagccccggg 1021 gcgcaggtct cgaaggtggc gctgcaccag aacgtggtca tccaggccgg gagtcgcgtg 1081 gacacgggct cgctgatcgg cgacagcgtg atcggcgcca actgccggat tggccggaac 1141 tgccggctga ccaacgtctt cctcatggcc gacgtcgtcg tgggggacaa ctgccggctg 1201 gagcactgcg tggtgggtgc gggcgccacc gtcaacgaga actgcgacgt gagcgccggc 1261 tgcgtgctgg gggccgggag cgagctgccg gccggcacca cgctggccag gaccctcgtc 1321 accagcacgc ccagcacgca gcgcggcgag gaggaggcgg tggccgtcga gttggagtcc 1381 ctcggtccgc gcgccttcat cgtgagcgat ctcaccaccg gcgaccccga ggactccgag 1441 ggcgaggact tgctgccgca gcagccgctg agcataccca agatgggcga cctcccggcg 1501 ccgctggacg agatcagcga ctgcagcgat ctcagcgagg acgacgagga tgcctcgcgg 1561 gcggtgaccc cgctgcccga cgacacaaac attttcctgg gcgaggtgat cgactccctg 1621 acgcgaggct tccgcgaaaa gtccaatccc gacttcctca tcctggagat caactcgtcg 1681 cgctacgcct acaacatgtc cctcaaggag gtcaacttca atgtggtgaa ggccgtgttc 1741 ggcatgcaga gcatcgtgga gccggcgaac aacaacgtgc tggtggccat aaatgccgcc 1801 ttcaagcagc tgggacccgt ggtctccaac tacattaaga gcgaggaggc catgctggat 1861 tgcctcaagg cgctggagga tgtgtacgag gagaatccgc tggtgcggga gaagatctcg 1921 cagatcgtcc actacctgta cgacaaggac tttgtgtccg aggacgccat ccagggctgg 1981 ttcgagcagc tggacgagga ggagcacgga catctgcgcc agagcctggc gaagctcgtg 2041 gcctggctgg atcagtccag cgaggaggac gacgacgatg aggaggaaga ggactaagtc 2101 ttggccgcta ttttgtactg tttttctaag cctttcctct gtaatcttta ttgaaccatg 2161 ctatggttta tccaaataaa agtaaggaaa atcaaagaaa a