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LOCUS XM_017143109 2456 bp mRNA linear INV 09-DEC-2024 subunit (AMPKalpha), mRNA. ACCESSION XM_017143109 VERSION XM_017143109.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143109.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2456 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2456 /gene="AMPKalpha" /note="AMP-activated protein kinase alpha subunit; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108058407" CDS 171..1937 /gene="AMPKalpha" /codon_start=1 /product="5'-AMP-activated protein kinase catalytic subunit alpha-2" /protein_id="XP_016998598.2" /db_xref="GeneID:108058407" /translation="MPQLRAAAAEAVAAGSSNGQPLVKIGHYLLGATLGTGTFGKVKI GEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF MIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLD HNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYA LLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKK HEWFQKDLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAI AYHLIIDNKRFADDAANQINEINNFFVAGSPPPPPPPLPQSTMQQQQQQQQQDNHAPL ATVTVGGTAASSGTSTPVPPASSSGTPSSTIRPHPERIAPMRERQLAMSVQNSGGGAF PEKTARGGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQN VKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPLSVSGVMPLQ PTGHHTMEFFEMCAALIIQLAR" misc_feature 243..1010 /gene="AMPKalpha" /note="Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase; Region: STKc_AMPK_alpha; cd14079" /db_xref="CDD:270981" misc_feature order(270..284,294..296,333..335,339..341,435..437, 483..494,504..506,510..515,519..521,618..623,627..629, 633..638,642..644,672..677,684..686,726..740,744..746, 834..845) /gene="AMPKalpha" /note="active site" /db_xref="CDD:270981" misc_feature order(270..281,294..296,333..335,339..341,435..437, 483..494,504..506,633..638,642..644,672..677) /gene="AMPKalpha" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270981" misc_feature order(504..506,510..515,519..521,621..623,627..629, 633..635,684..686,726..740,744..746,834..845) /gene="AMPKalpha" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270981" misc_feature 672..740 /gene="AMPKalpha" /note="activation loop (A-loop); other site" /db_xref="CDD:270981" misc_feature order(696..713,768..773,777..779,786..788,966..968) /gene="AMPKalpha" /note="heterotrimer interface [polypeptide binding]; other site" /db_xref="CDD:270981" misc_feature 1059..1250 /gene="AMPKalpha" /note="UBA-like autoinhibitory domain (AID) found in vertebrate 5'-AMP-activated protein kinase catalytic alpha (AMPKalpha) subunits; Region: UBA_AID_AMPKalpha; cd14336" /db_xref="CDD:270521" misc_feature 1557..1928 /gene="AMPKalpha" /note="C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK) alpha catalytic subunit; Region: AMPKA_C; cd12122" /db_xref="CDD:213378" misc_feature order(1560..1577,1596..1601,1611..1613,1620..1625, 1632..1634,1644..1652,1656..1670,1677..1685,1716..1718, 1728..1742,1755..1760,1764..1775,1878..1880,1884..1889, 1893..1901,1905..1910,1917..1922) /gene="AMPKalpha" /note="beta subunit interface [polypeptide binding]; other site" /db_xref="CDD:213378" misc_feature order(1692..1694,1698..1700,1878..1883,1887..1892, 1899..1901) /gene="AMPKalpha" /note="gamma subunit interface [polypeptide binding]; other site" /db_xref="CDD:213378" polyA_site 2456 /gene="AMPKalpha" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taagcaaaaa aaaaaaaatt aaacgcaacg cgaagaaaag ccaaaccgaa aaacgagacg 61 aaacaagctt gaaaaccagg aagtcagcac atcacacata gactatcgaa catccaactg 121 ggaagaggtg gcaaacgtaa cctgtggagc acccctagga tctggctgag atgccccagt 181 tgagggcagc ggccgctgag gcggtggccg ccggcagctc caacggccag ccgctggtga 241 agattggcca ctacctgctg ggcgccacct tgggcaccgg aaccttcggc aaggtgaaga 301 tcggcgagca ccagatcacc cgggtcaagg tggcggtcaa gatactcaac aggcagaaga 361 tcaagagcct ggatgtcgtg ggaaagattc gtcgggagat ccagaaccta aagctcttcc 421 gtcatccgca catcatcaag ttgtaccagg tcatttccac gccctcggac atctttatga 481 tcatggagta cgtgagcggt ggcgagctat tcgactacat cgtgaagcac ggcaagctgc 541 aggagcacca ggcgcgccgc ttcttccagc agatcatctc gggcgtggac tactgccacc 601 ggcacatgat cgtgcatcgc gatctgaagc ccgagaacct gctgctcgac cacaatatgc 661 acgtaaagat cgccgatttc ggactctcga acatgatgct cgatggcgag ttcctgcgca 721 cctcgtgcgg ctcccccaac tacgccgctc cggaggtaat ctccggcaag ctgtacgccg 781 gtcccgaggt ggacatctgg tcatgcggcg tcatcctgta cgccctgctg tgcgggacgc 841 tgcccttcga cgacgagcat gtgcccacgc tgttccgcaa aatcaaatcg ggcatctttc 901 ccatacccga gtacctcaac aagcaggtgg tcaatctggt ctgccagatg ctgcaggtcg 961 atccgctcaa gcgggcgaat atcgaggaga tcaagaagca cgagtggttc cagaaggatc 1021 tgcccgccta cctatttccc tcgtccatcg agcaggactc caatgtgatc gatacgtacg 1081 cggtggccga ggtttgcaca aagtttgggg tgaaggaaac ggaggtgcat aactctttgc 1141 tgagcggaga tcctcatgat cagctggcca ttgcctatca tctgattatt gataataagc 1201 gctttgctga tgatgccgcc aatcagatta atgagatcaa taacttcttt gtggctggct 1261 cgccaccacc gccgccgccg ccgcttcctc aatcgacgat gcagcagcag cagcagcagc 1321 agcagcagga taatcatgcc cccttggcca ctgttaccgt gggaggcact gcagccagct 1381 cgggaacatc tactcccgta ccgcctgctt cttctagcgg cactccaagc agcaccattc 1441 gtccgcatcc cgagcgaatt gcaccgatgc gcgagaggca gctggccatg tcggtgcaga 1501 actcgggagg cggcgccttt cccgagaaga cggcacgtgg cggaacgccc atcaagcggg 1561 ccaaatggca tctgggcatc cgatcgcaga gcaagccgaa tgacattatg ctggaggtct 1621 acagggccat gaaggccttg agctacgagt ggaagatcat caatccgtat catgtgcgag 1681 tgcgcaggca gaacgtaaag acgggcaagt tctccaagat gtcgctgcag ttgtatcagg 1741 tggatgccaa gagctatctg ctggacttca agtcgctgac gaacgacgag gtggagcagg 1801 gtgacgacgt gatcatggag agcctcacgc cgccaccgct cagcgtttcg ggcgtgatgc 1861 cgctgcagcc gacgggccac cacaccatgg agttcttcga gatgtgcgcc gccttgatca 1921 tccagctggc gcgatgagaa gggaggagaa gggatcttct cctgaggatt gacccatgga 1981 agcaacacaa aaacacacag ttccacagag gaaagctata gaatggagtt tgggatgttt 2041 tacttgacta gaatgctttt tgaatgttga aaacctaaaa cagcttttaa actttaaacg 2101 atattaggat ccccgacttt cgctttcctc tgtgcggctg tgtgataact aaataaagtg 2161 ttttttcgga atgtttggaa cctatgttgc ccgcttttcg cttccggtta gtctaagttt 2221 tgtaggtttc gtttctgttt ctgtttctat ttcgatatcg atttctgttt acactatata 2281 tatacaaatg ttgagttatt attttacccc gaatcccgaa tcggaaaacc atatgtgtac 2341 gtctaacgat ttgtaattgt aatcggagga agcagcgctt gtctggggca agcgggagtt 2401 ttatgtatgc tgtataaacc aaaaccacaa taaagcgatc cattaatatt ctaaaa