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LOCUS XM_017140761 3541 bp mRNA linear INV 09-DEC-2024 (Tak1), transcript variant X1, mRNA. ACCESSION XM_017140761 VERSION XM_017140761.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140761.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3541 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3541 /gene="Tak1" /note="TGF-beta activated kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056782" CDS 840..2894 /gene="Tak1" /codon_start=1 /product="mitogen-activated protein kinase kinase kinase 7 isoform X1" /protein_id="XP_016996250.2" /db_xref="GeneID:108056782" /translation="MATASLDALQAAYVDFSELTLREKVGHGSYGVVCKAVWRDKLVA VKEFFASAEQKDIEKEVKQLSRVKHVNIIALHGISSYQQATYLIMEYAEGGSLHNFLH GKVKPAYSLAHAMSWARQCAEGLAYLHAMTPKPLIHRDVKPLNLLLTNKGRNLKICDF GTVADKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQPFKGIDN AYTIQWKIYKGERPPLLTTCPKRIEDLMTACWKTVPEDRPSMQYIVGVMHEIVKDYTG ADKALEYTFVNQQIVTKESDGTVAAQSDSLSSLEEELSPSSTQLTPTTAANANVNAIA ITETETTTSSMTENTSSTSSDITPTNSGQLDNNPLFHMVSNRWDAIPEEDSNESRNDS FNLTSSAEATQRLETIRNGMILMASKPVEQLTVDVEPNGFDLSRSESSSSSTHAKSDG RERLTVTDTKPVIMTTDLANNNSNNNGGSHAHSNGLLSHVNGRQVTDEELQLQDQEQE IANSLDVAVDPDEDENDGTEQSLAEILDPELQPEPPIPNDAESQLIYREHRHMAKEYL SVDTNLYYAQDFKEKLIVQMDRNEREQKQELLRKIKDKEGLQSLYNNLQQQYERLPAS RQLSAGHHPPHQHPHSHPPSHPHLHGQQEEIGGALLPGSVTGGSDSVEEGWVVIQPHP NA" misc_feature 912..1664 /gene="Tak1" /note="Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated Kinase-1; Region: STKc_TAK1; cd14058" /db_xref="CDD:270960" misc_feature order(912..926,936..938,969..971,975..977,1056..1058, 1104..1115,1125..1127,1131..1133,1257..1259,1263..1265, 1269..1274,1278..1280,1314..1316,1323..1325,1362..1373) /gene="Tak1" /note="active site" /db_xref="CDD:270960" misc_feature order(912..926,936..938,969..971,975..977,1056..1058, 1104..1115,1125..1127,1257..1259,1263..1265,1269..1274, 1278..1280,1314..1316) /gene="Tak1" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270960" misc_feature order(924..926,1125..1127,1131..1133,1257..1259, 1263..1265,1269..1271,1323..1325,1362..1373) /gene="Tak1" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270960" misc_feature 1311..1373 /gene="Tak1" /note="activation loop (A-loop); other site" /db_xref="CDD:270960" misc_feature order(1458..1469,1482..1484,1536..1556,1653..1664) /gene="Tak1" /note="TAB1 binding site [polypeptide binding]; other site" /db_xref="CDD:270960" polyA_site 3541 /gene="Tak1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaggcacaac ggtaccacta atttattagt aaaaaataac ttgttttttt ttagtttcga 61 aaaaggcaaa atgacagtcc aagaggggcg aaataaataa gttgaagacg ccaggcaccg 121 agcaccaact gccccccacc acaggcacca cccacaggcc cgtttccgcg ggctaaaaag 181 tctcgcattt ggcccactag atcgcatcgg ttttactgaa aacaacaagt ttgtacttga 241 aaagtacggc gtatatccgg ggatcagccg ccaagtgaac gtccgatgcg gcaggagcag 301 cgatccgctc gaggattgtg gaatccggaa accggaggaa tcccggcgag gatgtgatgt 361 gcgcactggg ccctcaccgc tggtcgatat aaactcgtgc cccctcgtct cttccccgct 421 gtccacctcc tcctcctcct cctgggagtc ccgatccccc agagcatccg ccttctagaa 481 accgaggtgt cttggtttta caaccccaga tatcttggga atatcaaggg aacccaagaa 541 ctaagaaatc ctggagagaa gagagaatcc tagatgaaca tgaactgatg tagcttggtg 601 gaagatcaag aacacctcag gacctcgaaa gccaagcgaa aacccatgga atcttggcca 661 ctagcctgaa aaactaagca atattataga aggaaagtct gaagctatct taatactaag 721 aattggagga agaaaccccg aagctgaggt atcttcgaaa gaaacccttc acccagaaaa 781 cggaacaaga gggcaccttc ctctgaaaac cagggcagga tcatcggcag cccagggaga 841 tggccaccgc atcgctggac gcactgcagg cagcctatgt ggacttcagc gagctaacgc 901 tcagagagaa agtcggccat gggtcctacg gcgtggtctg caaggccgtc tggcgcgaca 961 agctggtggc cgtcaaggag ttcttcgcca gcgccgagca gaaggacatc gagaaggagg 1021 tgaagcagct gtcgcgcgtc aagcacgtga acatcatcgc cctgcacggc atatcctcgt 1081 accagcaggc cacctacctg atcatggagt acgccgaggg cggatcgctg cacaactttc 1141 tgcacggcaa ggtgaagccg gcctactccc tggcccatgc catgagttgg gcgcgccagt 1201 gtgccgaggg cctcgcctat ttgcacgcca tgacgccgaa gccgctgatc catcgcgacg 1261 tgaagccgct gaatctgctg ctgaccaaca agggacgcaa tctgaagatc tgcgatttcg 1321 gcacggtggc cgataagtcc accatgatga cgaacaatcg cggcagcgcc gcctggatgg 1381 cgcccgaggt cttcgagggc tccaagtata cggagaagtg cgacattttc agctgggcca 1441 tcgtcctctg ggaggttctg tcccggaagc agcccttcaa gggcatcgac aatgcctaca 1501 ccatccagtg gaagatctac aagggggaac gtccaccgct gctgacgacc tgccccaagc 1561 gcatcgagga cctgatgacc gcctgctgga aaacggtgcc cgaggatcgc ccctcgatgc 1621 agtacattgt gggcgttatg cacgagatcg tcaaagacta cacgggggcg gacaaggccc 1681 tggaatacac gtttgttaat caacagattg tcaccaaaga gagcgacggc acggtggccg 1741 ctcaatcgga tagcctcagt tcgctggagg aggaactgag cccctcgtcc acacagttaa 1801 caccgacaac ggcggccaac gccaatgtga acgcgatagc aataacagaa acagaaacaa 1861 cgactagctc aatgaccgaa aatacctcat caacatcatc ggacatcaca ccgacgaact 1921 cgggccaact tgacaataat ccgctattcc atatggtcag caatcgctgg gacgcgattc 1981 ccgaggagga tagcaacgag agccgcaacg acagcttcaa cctcacctcg tcggcggagg 2041 ccacccaaag gctggagacg atccggaacg gcatgatcct gatggccagc aagcccgtgg 2101 agcagctcac cgtcgacgtg gagccgaatg gcttcgatct gagtcgcagc gagagcagca 2161 gcagcagcac gcacgccaaa agcgatggcc gcgagcgact cacggtgacg gacaccaagc 2221 cggtgatcat gaccacggat ctggccaaca acaacagcaa caacaacggc ggtagccacg 2281 cccactcgaa cggactgctg agccatgtga acggaaggca ggtgacggat gaggagctgc 2341 agctgcagga tcaggagcag gagatcgcca actcgctgga cgtcgccgtg gatcccgacg 2401 aggatgagaa cgacggcacc gagcagtcgc tggccgaaat cctcgatccg gaactccagc 2461 cagagccgcc gataccgaac gatgccgaat cgcagctcat ttaccgcgag caccggcaca 2521 tggccaagga gtacctcagc gtggatacga acctctacta tgcgcaggac ttcaaggaga 2581 agctcatcgt ccagatggat cgcaacgagc gcgagcagaa gcaggagctg ctgcgcaaga 2641 tcaaggacaa ggagggcctg cagagtctgt acaacaatct gcagcagcag tacgagaggc 2701 tgcccgcttc ccgccaactt tcggccggcc atcatccccc acatcagcat ccgcattcgc 2761 atccgcctag ccatccgcat ctgcacggcc agcaggagga gatcggcggg gcactgctgc 2821 cgggctcggt gaccggaggc tcggattccg tggaggaagg ctgggtggtc atccagccgc 2881 atcccaatgc gtagagtctc ctcctcctcc gccgtcgttt agccgcctct ctatgttttt 2941 taggctagtg ctgtaacctt aaatctgtaa tccgtaaact gtaatctgta aactgtaatc 3001 cgtaatcggt aatctttatc tgtatcgtta gccattacac tgtgtttact tctatatata 3061 tttcagacga gtttgttcgt tttaagcgtc tttttttaaa tttaatttta agcgttttta 3121 gtccgtgttt cttttaattt agccaaccac tattttcacc cataagcact ctctgacact 3181 taatttaggt tttaattgta ctataaagct tatatacaca cacatactta gcatataact 3241 tatacatata tttctgtccg aggaagctga caaaaggagt agaccaaaaa aatataaaaa 3301 ccatcgaagc aacgacaaaa ctcagacttc tccttagtgt tatgatttaa tgggagcata 3361 ataccccagg gaaatacata aatgtttcaa tttgattaat caatttttat tttttaatac 3421 taagtaactt gcatcccaaa aaaaaacatg tttagtttgt attatttgta gttttttatt 3481 tattgccaat gaccttaatt acgggagaat aaaatctttt tacacaattg gaagcccaga 3541 a