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LOCUS XM_017139979 1415 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017139979 VERSION XM_017139979.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017139979.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1415 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1415 /gene="Pgcl" /note="Pepsinogen C-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108056253" CDS 1..1233 /gene="Pgcl" /codon_start=1 /product="lysosomal aspartic protease" /protein_id="XP_016995468.2" /db_xref="GeneID:108056253" /translation="MAGSQIQKLAFLAGILLILVNLGSSALHRIPVQRSPSFKRSHKM IVAERDFIQQKYTRQYTANGYPVEQLSNFDNFQYYGNISIGTPPQYFLVQFDTGSSNL WVPSSSCLSEACQDHQTYYGSESSTHVANGTAFSITYGTGSVTGYLSMDYVGFAGLIA KNQTFGEVTTEVGTNFVDAYFDGILGMGFPSLAVDGVTPTFQNMVNQGVVQSPVFSFF LRDNGSVVNYGGELILGGSDPSLYRGGLTYVDVIQAAYWKFQTDFIKIGSTLISTFDA AIADTGTSLIVAPVAEYTQIAQLFGADSEGTFQCTSLDSYPDLVITINGVDFRIQAKY YIIQENYLCSLAIQSISGQDFWIMGDVFLGRFYTEFDVGNQRLGFAPVNSAISARQLA LWQIFTLALACGVWKLWY" misc_feature 229..1146 /gene="Pgcl" /note="Eukaryotic aspartyl protease; Region: Asp; pfam00026" /db_xref="CDD:394983" misc_feature order(286..288,292..294,298..300,406..414,550..552) /gene="Pgcl" /note="inhibitor binding site [active]" /db_xref="CDD:133137" misc_feature 286..294 /gene="Pgcl" /note="catalytic motif [active]" /db_xref="CDD:133137" misc_feature 286..288 /gene="Pgcl" /note="Catalytic residue [active]" /db_xref="CDD:133137" misc_feature order(406..417,427..438) /gene="Pgcl" /note="Active site flap [active]" /db_xref="CDD:133137" polyA_site 1415 /gene="Pgcl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atggctggtt ctcaaatcca aaaattggcc tttctggccg ggatcctact gatcctggtg 61 aacttgggca gttccgcttt acatcgcata cccgttcaga gatcgccgag cttcaagcgc 121 agtcacaaaa tgattgtagc cgagcgggat tttattcagc agaaatacac gcgtcaatat 181 accgccaacg gttatcccgt ggagcagcta tcgaatttcg ataacttcca gtattacgga 241 aatatcagta tcggaacccc gccgcagtac ttcctggtgc agttcgacac gggatcctcg 301 aatctctggg ttccgagcag cagttgcctc agcgaggcgt gccaggatca tcagacctac 361 tatggcagtg agtctagtac gcatgtggcg aatggaacgg cattctcgat aacctacggt 421 accggcagtg ttaccggtta tctatcgatg gattatgtag gcttcgccgg gctgattgcg 481 aagaatcaga cattcggtga ggtgaccacc gaggtgggta cgaatttcgt ggacgcctac 541 ttcgatggaa ttctgggcat gggcttcccc agtctggccg tggatggtgt aacgcccacg 601 ttccagaata tggtcaatca gggcgttgtt cagagccccg tcttctcgtt cttcctgcgc 661 gacaatggta gtgtggtcaa ctacggcggt gagctcattt tgggcggttc ggatccctca 721 ctctatagag gtggcctcac ctatgtggat gtcatccagg cggcctactg gaaattccaa 781 acggatttca ttaagatcgg tagtacgctc attagtacct ttgatgcggc aattgcggat 841 actggaacct ctttgatcgt cgctcccgtg gcggaatata cccagattgc ccagctattc 901 ggtgccgatt ccgagggtac cttccaatgc acgagtttgg attcctatcc ggatctggtg 961 atcaccatca atggcgtgga ctttaggatc caggccaagt actatatcat ccaggagaac 1021 tacctctgct cgctggccat tcaatcgatt tcgggccagg acttttggat catgggcgat 1081 gtgttcttgg gtcgcttcta caccgaattc gatgtgggca atcaaagatt gggctttgct 1141 ccggtaaatt cggccatttc tgcgaggcaa ttggctctct ggcagatctt caccttggca 1201 ctcgcttgtg gagtgtggaa attgtggtat tgaaacgatt gttgggtttc caaaatgttg 1261 ccgaaaagta ttttcctaaa attagaaaaa aaaacattga ataagtgaga tatttaacat 1321 agttacaaat ttttttttcg ggatctccat ccctagactt aagatctttt caatgtacaa 1381 acgaaaattg aaataaaatc gatatcgaag caaaa