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LOCUS XM_017139224 5169 bp mRNA linear INV 09-DEC-2024 X2, mRNA. ACCESSION XM_017139224 VERSION XM_017139224.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139224.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5169 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5169 /gene="slpr" /note="slipper; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108055742" CDS 693..4100 /gene="slpr" /codon_start=1 /product="mitogen-activated protein kinase kinase kinase isoform X2" /protein_id="XP_016994713.2" /db_xref="GeneID:108055742" /translation="MLPISEEQQQQQQQRQLEQLHHQQIPEIPISGDLEQVEPQVGDG SLWTALYDYEAQGEDELTLRRGEIVVVLSTDSEVSGDVGWWTGKIGDKVGVFPKDFVT DEDPLQLNVSSAIGDIQPHEIEYSELDIKEVIGSGGFCKVHRGYYDGEEVAIKIAHQT GEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCLNTKLCLVMEYARGGSLNRILAGK IPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNQLQQKTLKITD FGLAREMYNTQRMSAAGTYAWMPPEVISVSTYSKSSDVWSYGVLLWELITGETPYKGF DPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLESIACSK FTLTPQESFHYMQECWKKEIAEVLHDLREKEKELRNKEEQLLRVQNEQREKATLLKIQ EQILREREMVLIERELVMMQPVPSKRKPKKGKKNKPLQISLPTGFRHTITAVRDKAEQ PGSPSFSGLRIVALTDGHKGKTWGPSTMHQRERSLLPPQLGGGQPEWPAQTSTHSSFS KSAPNLDKKQQQQQQNQQQQVASLTPPPGLGALGGSGSGGVGGTPATPLLYTGIPYLL TRPNNIGSCKAITTITTTNNTTTTTTTTNNNNNSISANNNSNQLNNNSTSNSNNNSQT NPTSQQNGRSNSNSSTSQSPIAKMYHRARSQEYGLDYPPPPPLYLVTDDSSETDTVAS PTGCFHFLKSGHSSSVSNQVSGASVHLHRFGGSLGNSPAVGRKKHSLDSSGHPPPPVN NSISLALPNQLTLPSEDNNTYDHAFYRDVIKKMSMASSERVNSKSSGDLTMYNSSTPL TARNCDDADEEEACEGGRFQRNFSGSQFPRHCFFTRQENDLEAEAEADEAEVEEDSLE DEGQVPVNQMRQNSTTSRKSSVTFQSVSFEEPTPATTARSDLYTSSASISFATYRSAS PSLSSSSTTASASASIASSGGEMIQGEAWTARRMVNVQPHSDVIKMKEDLQRQHSKNQ RKHRPKHITKSKSVEAPVEGQNLNQHQHPHHHHHHHHSKFRSLLNLFTRSRKKYSKLA EHNLMGGSDFSAIDPFQTDLAIGGSSRSLKRKGKKPQTQSCEQLERC" misc_feature 828..1001 /gene="slpr" /note="Src Homology 3 domain of Mixed Lineage Kinases; Region: SH3_MLK; cd11876" /db_xref="CDD:212809" misc_feature order(843..845,849..851,858..860,870..872,939..944, 981..983,987..992) /gene="slpr" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212809" misc_feature 1089..1856 /gene="slpr" /note="Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; Region: STKc_MLK; cd14061" /db_xref="CDD:270963" misc_feature order(1092..1106,1116..1118,1149..1151,1155..1157, 1254..1256,1299..1310,1320..1322,1326..1328,1440..1442, 1446..1448,1452..1457,1461..1463,1518..1520,1527..1529, 1569..1580) /gene="slpr" /note="active site" /db_xref="CDD:270963" misc_feature order(1092..1106,1116..1118,1149..1151,1155..1157, 1254..1256,1299..1310,1320..1322,1440..1442,1446..1448, 1452..1457,1461..1463,1518..1520) /gene="slpr" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270963" misc_feature order(1104..1106,1320..1322,1326..1328,1440..1442, 1446..1448,1452..1454,1527..1529,1569..1580) /gene="slpr" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270963" misc_feature 1515..1580 /gene="slpr" /note="activation loop (A-loop); other site" /db_xref="CDD:270963" polyA_site 5169 /gene="slpr" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttcaaaat ccgctacccc gttcatgtga ccccaataaa atgccttata aaagagaata 61 ttgctaccga aataaatcaa aattaattta aatatacacg taagagtagt ttcaatatat 121 tggctggcaa aaagatgccc tccaaccgga accaaaatcc aaagtgagcc acaaaacaaa 181 ccagttcagg tggctgggtc caaagaccag ttcaattaaa ctagttcaca tttgaacagt 241 gcaactctag tttttttttt ttaatacata tatgttttaa aaacatatgc ggaatcgcga 301 ggataaaacg gatctaaccg attgcaaagg atcaaggata aaggcgacgt aacatacgca 361 acgttcacga cgacagcgac gccgactgcg acgccgacag cgactgagcg accgtggcga 421 caatggtgtg ccgtgcgtgt gtgtgtgttt tgtatcgtgt tgtctgattg tgtgccgttg 481 ttgttgttgt tcttcttctg gctcttattg ttgttgttgt gcgtgtggcc aaacggacgg 541 acagtgggac aaaacgacgg acggagtgga tgcttgcgat atcctagcca ggaaacaata 601 gcaaaaacaa aggggtaaac agggtttcca tgtcgccaaa agtgggcctt tgatgcccag 661 gacgaaggac gaggaggacc aggaacagga caatgctgcc catcagcgag gagcagcagc 721 agcagcagca gcagcggcag ttggagcaac tgcatcacca gcagatcccg gaaattccca 781 tatccggcga tctggagcaa gtggagcccc aggtgggcga tggcagcctg tggaccgcgc 841 tctacgacta cgaggcgcag ggcgaggatg agctgaccct gcggcgcggc gaaatagtgg 901 tcgtcctgtc cacggacagc gaggtttccg gcgatgtggg ctggtggacg ggcaaaatcg 961 gggataaggt gggcgtcttt cccaaggact tcgttaccga cgaggatccc ctccagctga 1021 acgtctcctc cgccatcggc gacatccagc cgcacgagat cgagtacagc gagctggaca 1081 tcaaggaggt catcggctcc ggtggcttct gcaaggtgca tcgcggctac tatgatggcg 1141 aggaggtggc catcaagatt gcccaccaga cgggcgagga tgacatgcag cggatgcggg 1201 acaatgtcct gcaggaagcc aagctcttct gggcccttaa gcatgagaat atagccgccc 1261 tgcgcggcgt ctgtttgaac accaagctct gtttggttat ggagtacgcc cgcggcggca 1321 gtttgaatcg catcctggcc ggaaagatac cgcccgatgt cctggtcaat tgggccatac 1381 aaatagccag gggcatgaat tatctgcaca acgaggcgcc catgtcgatc atacatcgcg 1441 acctcaagtc atccaatgtg ctgatctacg aggccatcga gggcaatcag ctgcagcaga 1501 agacgctgaa gattaccgat ttcggtttgg cccgcgagat gtacaacacg cagaggatga 1561 gcgcggcggg cacgtacgcc tggatgccgc cggaggtcat cagcgtgagc acctactcca 1621 aatcctcgga tgtttggagc tatggtgttc tgctctggga actgattacg ggcgagacgc 1681 cctacaaggg cttcgatccc ttgtcggtgg cctatggcgt ggctgtcaac acgctgacct 1741 tgcccatacc aaaaacctgc ccagaaacct ggggagcctt gatgaaaagc tgctggcaaa 1801 cggatcccca caagcggcct ggtttcaagg agatactcaa gcagctggag agcatcgcct 1861 gctccaagtt cacgctgacg ccccaggaat cctttcacta catgcaggag tgctggaaga 1921 aggagatcgc cgaagtgctg cacgacttgc gcgaaaaaga aaaggaactg cgcaacaagg 1981 aggagcagct gctcagggtg cagaacgagc agcgcgagaa ggcgaccctg ctgaagatcc 2041 aagaacagat tctgcgcgag cgcgaaatgg tgctgatcga aagggagctg gtcatgatgc 2101 agccggtgcc gtcgaaacga aagcccaaga agggtaaaaa gaacaaaccg ctgcagatat 2161 cactgcccac gggcttccgg cacaccatta cggccgttcg cgacaaggcg gagcagcccg 2221 gttcaccttc cttctccgga ctgcgcatcg tggcactgac cgatgggcac aagggcaaga 2281 cgtggggccc gtcgacgatg caccagcggg agcgatccct gctgcccccg caactgggcg 2341 gcggtcagcc ggagtggccc gcccagacct cgacccactc ctcgttcagc aagagtgctc 2401 cgaatctgga caagaagcag cagcagcagc agcagaacca gcagcaacag gtggcctccc 2461 tgacgccgcc gccgggtttg ggagctttgg gtggaagtgg aagtggcggc gttggtggga 2521 cgccggccac gcccctgttg tacacaggta taccctattt actaacgcgc cccaacaaca 2581 ttggcagttg taaagccatc accaccatca caaccaccaa caacaccacc accaccacca 2641 ccacaaccaa caacaacaac aacagcatct ccgccaacaa caacagcaat cagctaaata 2701 ataatagtac tagtaatagc aacaataaca gtcaaactaa cccgacctcc cagcaaaacg 2761 gcaggagcaa ctccaacagc agcaccagcc aatcgccaat agcaaagatg taccatcggg 2821 ccaggagtca ggagtacggc ctggattatc ctccgccacc tccgctctat ctggtaaccg 2881 atgacagctc ggaaacggac acggtggcca gtccaaccgg ttgctttcac ttcctcaagt 2941 ccggccactc atcctccgtt tcgaatcaag ttagcggtgc cagcgtgcat ctgcatcgct 3001 ttggcggcag tctgggcaac agtcccgctg tcggcaggaa gaaacactcg ctggacagca 3061 gtggccatcc tccgccgccg gtcaacaaca gcattagttt ggccctgccc aatcaactga 3121 cgctgccgtc agaggataat aatacgtacg atcatgcctt ctatcgggat gtcatcaaga 3181 agatgtccat ggccagcagc gaacgggtga attccaagtc cagcggtgat ctgaccatgt 3241 acaactccag cactccgctg acggccagaa attgcgatga tgccgacgag gaggaggcct 3301 gcgagggcgg acgctttcag cgcaacttca gcggctcgca gtttccgcgt cactgcttct 3361 tcaccaggca agaaaacgat ctagaagcag aagcagaagc agatgaggcg gaggtggagg 3421 aggactccct ggaggatgag ggccaagtgc ccgttaatca aatgcgccag aactctacga 3481 cgtcgcgcaa gagctcggtg accttccaga gcgtcagttt cgaggagccc acgccagcga 3541 cgactgccag atcggatcta tatacatcca gtgcttccat aagcttcgcc acctaccgct 3601 ctgcctcgcc ctcgctttcc tcgtcctcca caaccgcttc cgcctccgca tcgattgcct 3661 cgtccggtgg cgagatgatt cagggtgaag cctggacggc acgtcgcatg gtcaatgtcc 3721 agccgcattc cgatgtcatc aagatgaagg aagatctgca gcgtcagcac agcaagaacc 3781 aaaggaagca ccggcccaag cacatcacca aatccaagtc tgtcgaggcg ccagtcgagg 3841 gacaaaatct aaatcagcat cagcatcccc atcaccatca tcatcatcat cactccaagt 3901 tccgatcgct gctcaatctg ttcacgcgtt cgcgcaaaaa gtacagcaag ctggccgagc 3961 acaacctgat gggtggatcc gacttcagtg ccatcgatcc cttccaaact gacctggcca 4021 tcggcggcag cagtcgctct ttaaagcgca agggcaagaa gccgcagacg caatcctgcg 4081 agcaactaga gcgatgctga ggcaaaataa gagctgtgct gctgttggaa ccgcctaatt 4141 agctcgttgt tttatattaa aactctagac taagtcagac gagaaagata gaaagagaac 4201 agacgaaaga ttagccatag ctaatgtgtc aaaataggag gacttggatg ccccccgtct 4261 aacgaaatca ttaaaccacc ccccctttcc gaaccgaatt gttcctaacg aatgcaatat 4321 gctaaatcta caagctacaa accagatttc cccattagtc cagtgatttt cctaaaacga 4381 aattgcggaa tcagattaaa cggatagact aacgctgctt atacgtagac atccaaaaaa 4441 taaaaaaaac aaaacaaaac acctgcatgg gccaatggca aaatattcaa ctaaaccatt 4501 tacattaatg tgtaacactt ggattaacct taagtaaacc atattgctat atttataccg 4561 atgcgtatag gcgtccttac attacattac acacatctta gttgaactaa gtttaattgt 4621 ttaggaactc caacactttt ttttgttcgt gtcttcccct tttccctcct cgatgtaaga 4681 gatcttttcc aaattttcat cgctttccga atttcgcttg gcccaagctt aacgaaaatt 4741 cgccaacgat ttgcggagga ctcttaattt taattcctta tttgatatcc aactcctttc 4801 ggtattttga gcacagtttt atttacattt attacgcaat cgggttttcc aatttattta 4861 tttatgattt cttttacaaa agcacatgag taatacgcgc aaaaacgaaa aaaaacctgt 4921 gatcagaaga cgatgatgga aaaaagaaat gataattttt ttgtattatt ttatgaaaat 4981 tttcaattgt atatttatat tcattttacg atttgttcat tttacgttta ctgctcgatt 5041 cgatttgtac tttgtatatt aatgtatttt ccaatttggg gccaagccaa cccaacaaaa 5101 aaaaaaacaa aaaataaata gaatcaatct tagaaacata aatccgacaa taaaaccaac 5161 taaagagaa