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LOCUS XM_017139223 6292 bp mRNA linear INV 09-DEC-2024 X1, mRNA. ACCESSION XM_017139223 VERSION XM_017139223.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139223.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6292 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6292 /gene="slpr" /note="slipper; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055742" CDS 693..4328 /gene="slpr" /codon_start=1 /product="mitogen-activated protein kinase kinase kinase isoform X1" /protein_id="XP_016994712.3" /db_xref="GeneID:108055742" /translation="MLPISEEQQQQQQQRQLEQLHHQQIPEIPISGDLEQVEPQVGDG SLWTALYDYEAQGEDELTLRRGEIVVVLSTDSEVSGDVGWWTGKIGDKVGVFPKDFVT DEDPLQLNVSSAIGDIQPHEIEYSELDIKEVIGSGGFCKVHRGYYDGEEVAIKIAHQT GEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCLNTKLCLVMEYARGGSLNRILAGK IPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNQLQQKTLKITD FGLAREMYNTQRMSAAGTYAWMPPEVISVSTYSKSSDVWSYGVLLWELITGETPYKGF DPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLESIACSK FTLTPQESFHYMQECWKKEIAEVLHDLREKEKRFQTIEEELRNKEEQLLRVQNEQREK ATLLKIQEQILREREMVLIERELVMMQPVPSKRKPKKGKKNKPLQISLPTGFRHTITA VRDKAEQPGSPSFSGLRIVALTDGHKGKTWGPSTMHQRERSLLPPQLGGGQPEWPAQT STHSSFSKSAPNLDKKQQQQQQNQQQQVASLTPPPGLGALGGSGSGGVGGTPATPLLY TGYQGHSKMDDWRPGATNMPIMSPSPYLLSRFTSNVPLPTLYAGDSARKPKLSVIELL LYNMASLLAGVAAGYDVRMSNVSPVHPTLLSEVPALKAAPKAVASITEDQDKIVELEV EAPPKQQEDEQQQEIRESTPRKMVSQTRFSGMEAPVSKSQPTSLARRIGGSQPYYTPV QRTPQHQLHHPQQHHQHHQPQAVPSAVVTTVAASQPPVSALYAGTQPPTPSPRRKLSN SSFGNPNPQPEAFEEFRVGGGIGPPPLYAPADYLRNGPSYSNDGGNYRNGYFGSNYFP YRPELNYSYERDCKSYPDYSYDYNHRLPDYYDYQYEAPVVPVPVPVTVPCPVSQTRTP PPRVPQMGVSAAGHRRTPSTVSNNSNVLLEHEELLCYDYNNLNLNADYEREREREREQ VPPPTKQELYAGSPKLLNRLIHSPLPMTKSKYATAAVTRPASLPFEQHALSLGYQQVG SLPAPLASGQSKLRSSLKKYNGGGGGGGNGSTSSQQGTPTNPTPPDSLTSDDSSYLSA KEGSIGSQHSRVRFSPEAYLDANPLPTLGRRMTAPAMQLPHQQQQQRRQRQASSGSTP SPSASSS" misc_feature 828..1001 /gene="slpr" /note="Src Homology 3 domain of Mixed Lineage Kinases; Region: SH3_MLK; cd11876" /db_xref="CDD:212809" misc_feature order(843..845,849..851,858..860,870..872,939..944, 981..983,987..992) /gene="slpr" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212809" misc_feature 1089..1856 /gene="slpr" /note="Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; Region: STKc_MLK; cd14061" /db_xref="CDD:270963" misc_feature order(1092..1106,1116..1118,1149..1151,1155..1157, 1254..1256,1299..1310,1320..1322,1326..1328,1440..1442, 1446..1448,1452..1457,1461..1463,1518..1520,1527..1529, 1569..1580) /gene="slpr" /note="active site" /db_xref="CDD:270963" misc_feature order(1092..1106,1116..1118,1149..1151,1155..1157, 1254..1256,1299..1310,1320..1322,1440..1442,1446..1448, 1452..1457,1461..1463,1518..1520) /gene="slpr" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270963" misc_feature order(1104..1106,1320..1322,1326..1328,1440..1442, 1446..1448,1452..1454,1527..1529,1569..1580) /gene="slpr" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270963" misc_feature 1515..1580 /gene="slpr" /note="activation loop (A-loop); other site" /db_xref="CDD:270963" ORIGIN 1 agttcaaaat ccgctacccc gttcatgtga ccccaataaa atgccttata aaagagaata 61 ttgctaccga aataaatcaa aattaattta aatatacacg taagagtagt ttcaatatat 121 tggctggcaa aaagatgccc tccaaccgga accaaaatcc aaagtgagcc acaaaacaaa 181 ccagttcagg tggctgggtc caaagaccag ttcaattaaa ctagttcaca tttgaacagt 241 gcaactctag tttttttttt ttaatacata tatgttttaa aaacatatgc ggaatcgcga 301 ggataaaacg gatctaaccg attgcaaagg atcaaggata aaggcgacgt aacatacgca 361 acgttcacga cgacagcgac gccgactgcg acgccgacag cgactgagcg accgtggcga 421 caatggtgtg ccgtgcgtgt gtgtgtgttt tgtatcgtgt tgtctgattg tgtgccgttg 481 ttgttgttgt tcttcttctg gctcttattg ttgttgttgt gcgtgtggcc aaacggacgg 541 acagtgggac aaaacgacgg acggagtgga tgcttgcgat atcctagcca ggaaacaata 601 gcaaaaacaa aggggtaaac agggtttcca tgtcgccaaa agtgggcctt tgatgcccag 661 gacgaaggac gaggaggacc aggaacagga caatgctgcc catcagcgag gagcagcagc 721 agcagcagca gcagcggcag ttggagcaac tgcatcacca gcagatcccg gaaattccca 781 tatccggcga tctggagcaa gtggagcccc aggtgggcga tggcagcctg tggaccgcgc 841 tctacgacta cgaggcgcag ggcgaggatg agctgaccct gcggcgcggc gaaatagtgg 901 tcgtcctgtc cacggacagc gaggtttccg gcgatgtggg ctggtggacg ggcaaaatcg 961 gggataaggt gggcgtcttt cccaaggact tcgttaccga cgaggatccc ctccagctga 1021 acgtctcctc cgccatcggc gacatccagc cgcacgagat cgagtacagc gagctggaca 1081 tcaaggaggt catcggctcc ggtggcttct gcaaggtgca tcgcggctac tatgatggcg 1141 aggaggtggc catcaagatt gcccaccaga cgggcgagga tgacatgcag cggatgcggg 1201 acaatgtcct gcaggaagcc aagctcttct gggcccttaa gcatgagaat atagccgccc 1261 tgcgcggcgt ctgtttgaac accaagctct gtttggttat ggagtacgcc cgcggcggca 1321 gtttgaatcg catcctggcc ggaaagatac cgcccgatgt cctggtcaat tgggccatac 1381 aaatagccag gggcatgaat tatctgcaca acgaggcgcc catgtcgatc atacatcgcg 1441 acctcaagtc atccaatgtg ctgatctacg aggccatcga gggcaatcag ctgcagcaga 1501 agacgctgaa gattaccgat ttcggtttgg cccgcgagat gtacaacacg cagaggatga 1561 gcgcggcggg cacgtacgcc tggatgccgc cggaggtcat cagcgtgagc acctactcca 1621 aatcctcgga tgtttggagc tatggtgttc tgctctggga actgattacg ggcgagacgc 1681 cctacaaggg cttcgatccc ttgtcggtgg cctatggcgt ggctgtcaac acgctgacct 1741 tgcccatacc aaaaacctgc ccagaaacct ggggagcctt gatgaaaagc tgctggcaaa 1801 cggatcccca caagcggcct ggtttcaagg agatactcaa gcagctggag agcatcgcct 1861 gctccaagtt cacgctgacg ccccaggaat cctttcacta catgcaggag tgctggaaga 1921 aggagatcgc cgaagtgctg cacgacttgc gcgaaaaaga aaagcgtttc caaaccatcg 1981 aagaggaact gcgcaacaag gaggagcagc tgctcagggt gcagaacgag cagcgcgaga 2041 aggcgaccct gctgaagatc caagaacaga ttctgcgcga gcgcgaaatg gtgctgatcg 2101 aaagggagct ggtcatgatg cagccggtgc cgtcgaaacg aaagcccaag aagggtaaaa 2161 agaacaaacc gctgcagata tcactgccca cgggcttccg gcacaccatt acggccgttc 2221 gcgacaaggc ggagcagccc ggttcacctt ccttctccgg actgcgcatc gtggcactga 2281 ccgatgggca caagggcaag acgtggggcc cgtcgacgat gcaccagcgg gagcgatccc 2341 tgctgccccc gcaactgggc ggcggtcagc cggagtggcc cgcccagacc tcgacccact 2401 cctcgttcag caagagtgct ccgaatctgg acaagaagca gcagcagcag cagcagaacc 2461 agcagcaaca ggtggcctcc ctgacgccgc cgccgggttt gggagctttg ggtggaagtg 2521 gaagtggcgg cgttggtggg acgccggcca cgcccctgtt gtacacagga taccagggac 2581 acagcaagat ggatgactgg cgcccggggg ccaccaacat gccgattatg tcgccatcgc 2641 cgtatctcct cagccgcttc accagcaacg ttcccctgcc gacgctctac gccggcgatt 2701 cggcaagaaa gccgaagctc tcggtgatcg agctgctgct ctacaacatg gcctccctgc 2761 tggccggagt ggcggctggc tacgatgtcc ggatgtcgaa cgtgtcgcca gtgcatccca 2821 cgttgctcag cgaagtgccc gctttgaagg cggccccgaa agcagtggct tcaatcaccg 2881 aggatcagga taagatcgtg gaactggagg tggaggcgcc gcccaagcag caggaggacg 2941 aacagcagca ggaaataaga gagagcacgc ccagaaagat ggtcagccag acgagattta 3001 gcggcatgga agctccggtc agcaagtcac agcccacatc cctggcccgt cgcattggcg 3061 gcagtcagcc gtattacacg cccgttcagc ggacaccaca gcaccagttg caccacccgc 3121 agcagcacca ccagcaccac caaccccagg cggtgccatc tgctgtggtc acaacagtgg 3181 cggcctcaca gccaccagtg agtgctctct atgccggaac ccagccacca acgccatcgc 3241 cacgccgcaa actgagcaac agcagcttcg gcaatccgaa tccccagccg gaggccttcg 3301 aggagttccg agtgggcggt ggcatcggtc caccgccgct ctatgcgcca gcggattacc 3361 tgagaaacgg gccgagctac tccaacgatg gggggaacta ccggaatggt tactttggtt 3421 ccaactactt cccctaccga ccagagttga actacagcta cgagcgtgac tgcaagtcgt 3481 atccggacta ctcgtacgac tacaaccatc ggctgcccga ctactacgac taccagtacg 3541 aggcgccagt ggttcccgtt cccgtgccgg tgaccgttcc ctgtccggtc agccagaccc 3601 gcactccgcc gccccgagtg ccccagatgg gcgtgagtgc agcgggacac cgacgcactc 3661 cctccaccgt ttccaataac tccaatgtgc tgctggagca cgaggagctg ctctgctatg 3721 actacaataa tctcaatctg aatgcggatt atgagaggga gagggaaagg gaacgggagc 3781 aagtgcctcc acccacgaaa caagagctct atgcaggatc accgaagctc ctaaaccggc 3841 tgatccacag ccccttgccg atgaccaaga gcaagtatgc cacggcggcg gtaacgcgac 3901 cggccagcct gcccttcgag cagcacgccc tttcgctggg ctaccagcag gtgggctccc 3961 tgccagcacc tttggccagc ggccaatcca agctgcgcag ctcgctgaag aagtacaatg 4021 gcggcggagg aggaggagga aatggctcca catcctcgca gcagggcaca cccactaatc 4081 ccacgccgcc ggactcgctg accagcgacg atagctccta tctgagtgcc aaggagggct 4141 ccattggctc gcagcacagc cgggtgcgct tcagtccgga ggcctatttg gatgccaatc 4201 cgctgcccac tttgggacgc aggatgacgg ctccggcgat gcagttgccg catcagcagc 4261 agcagcagag gcgccagcga caggcctcca gtggcagcac accatcgcct tcggcctcat 4321 cctcctagca gacgcgactg gcgctgaccc tgcagttggc gcggagtcca ggagcggaca 4381 tcggaagcgg aggaggagga gcagctggct tgacactcca tcagcagcgg gttccctatc 4441 gctggtactc gggagcccgg cgatctcggt cggcccacta cgagtaccgc ctgtgaaaga 4501 gtgggaaagg ctcatgaatg caagcgaaaa agaaagggat ggccgtagaa tctagacgag 4561 atcggaggag aattgatagg ggaaaaatat gtggagtggt ggtgggaaaa tcaagagaaa 4621 ggcagtaaat ctaaaaaatc agcatcataa gttctgctga aattaaataa tcatttacaa 4681 aagtaaatca agcaattaag gataaaaaaa taatatcaaa ggtcgcgtaa tcccatggaa 4741 ataatgggtt tcaggaagaa ttagaagata tatcaaggga aaaagttaga agcgttttta 4801 cctcacagtt ccagatatta aaggatctat agcaggactc acaaaagcag cctataccca 4861 ctgtctgtac ataaaagtag ttaacaagtt gttcacaccc aagtaaatat atcaaattcg 4921 atgttaatat tagccaacag atataggggc gttctagatt tttggagacc ttttccgacg 4981 gtgtatcgta gcctcttagg aactcatctt cgaaagctgt agaacgaccc cccaaaacat 5041 acacaacccc cgacttgtgc gatttgcctt aaaagtagag tgaagacttc actagttttg 5101 cctgatgccg gattccaaaa aagccactca tcttaacgaa tcccaatccc ttgtataaga 5161 tctacgattc aaccgatgaa caaatagttt gatatagcta atatactccc atttatgtat 5221 tatatatata tattatatag gtatattata acaaagacga gggtctccac ttgcgttctc 5281 cgattcagat taagtgcagc cagctagcaa gccatcaaca agaacaagaa caacaataat 5341 taataatact ttgtaattcc gaggacacca catcccaatc aagacacacg ccagccgtaa 5401 gctccatttt taagtctgac aaaatgttta tatattaata tatatttata gacacctaga 5461 tatagaccga tatagacgcg ttaacccaaa cctctagctc tgaattgaat aacagtatag 5521 ctcgatcgat ttacaactac ttataatgga tatatactat atagatatat atacacatat 5581 aacgaagcat attgctgctg ttttttccaa ataatgaata gctatgataa tgatataatg 5641 gcgatgaatt tgactacctt tacatatata tatatatatg ccacgtacat agatatttca 5701 actaaaatgc tttacataat aagcgatagc cgttgatatt cgaggtgttt tgccagtttg 5761 tcggggtttg aaaaatgtct ggatttattt aaaaatattt tttaaatccc cagaaatata 5821 cgaaacaccc cggataatgt gtaatctgat cgcagcctgc acaaatagct tccttcgaca 5881 tttaagttac tcgactcgtt tgccactcga acggaactca aactctagag tctctagacc 5941 atagtattca atttgggcca ctaaccaccg cccatcctca tgcatatatt taccaattag 6001 tatctataat ttagacaaat tgttgtttat gctcacacaa agccgaagtt aaccaaaaat 6061 aggaatccga atacgaatcc gaatccgatt gaccagaaac aattgaaact aagcaatata 6121 gccacgcatc tgcccgaaag ttaaccttaa catttaccca ctagcttaat tgcattcgcc 6181 tgcattattt attaattagc cagggttcga gttcttaagt ttattttgta tttgctgctt 6241 aattgctttg aattagcaag cggacaacaa aaaatgtaag gggtgaaatg gg