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LOCUS XM_017138084 6493 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_017138084 VERSION XM_017138084.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138084.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6493 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6493 /gene="Tlk" /note="Tousled-like kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054955" CDS 269..4126 /gene="Tlk" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X4" /protein_id="XP_016993573.2" /db_xref="GeneID:108054955" /translation="MPVVKQRKMSRFKMSAGAQLQMAPQTTSALSHHHPNQQQQLQPP QQQQAQPPPPQQQQHFANHHSAQQQSQQQQEQQNPQQAQQQQAQQQQILPQPHLQHLH KHPHQLQLHQQQQQLHQQQQHFHQQQQQSLQGLHQGSSNPDSNMSTGSSHSEKDVNDM LSGGGAAPGVAAAAAIQQQHPAFAPALGMQQPPPPPPQHSNNGGEMGYLTAGTTTTAS VTAVGKPRTPAERKRKRKMPQTSADEAGSGGGSGGAGAAVVNNSSLKGKSLAFRDMPK VNMSLNLGDRLGGSAGSGGGAGGAGSGGSGAGSGSGSGGGKSARIMLPVSDNKKINDY FNKQQTGVGVGVPGGGGAGGNTAGLRGSHTGGGSKSPSSAQQQQQTTQQQQQQASGVA TGGGAGGAAANQQVQVQTSSAYALYPPASPQTQTPQQQQQQQPGADFHYVNSSKAQQQ QQQQQQRQQQQTSNQMVPPHVVVGLGGHPLSLASIQQQQQTPLSQQQQQQQQQQQQQQ QQLGPPTTSTASVVSTHPHQLGSLGVVGMVGVGVGVGVNVGVGPPLPPPPPMAMPAAI ITYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSDEQKCQIVGNQKTIDQHKSHI AKCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQEL SRRQEEITAEREEIDRQKKQLMKKRPAESGRKRNNNSNQNNQQQQQQQQHQQQQQQQN SNSNDSSQLTGGVVTGPGSDRLGGAAGGVSVDSGLGGNNAGAIGGGAVGGGVGGGGVG SGGVGGVGGGGGRGLSRSNSTQANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGG LGGNDSGSCSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKL ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYV ACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEY CDGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGN VCGEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKV DVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRG CLAYRKEDRMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQ ANSTGQTSFSAHMFGNMNQSSSS" misc_feature <1979..>2389 /gene="Tlk" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 3137..3940 /gene="Tlk" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(3146..3148,3185..3187,3191..3193,3299..3301, 3350..3361,3371..3373,3377..3379,3494..3496,3500..3502, 3506..3511,3515..3517,3557..3559,3566..3568,3635..3646) /gene="Tlk" /note="active site" /db_xref="CDD:270892" misc_feature order(3371..3373,3377..3379,3494..3496,3500..3502, 3506..3508,3566..3568,3635..3646) /gene="Tlk" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3554..3592,3605..3646) /gene="Tlk" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" polyA_site 6493 /gene="Tlk" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaacaatga gcaaaataaa atacaaaata ttaaataaca aaataaataa aacataaaac 61 tacaaacaga aaatacggta aaattaaata agattaaaca atcaattaaa aactgcagtg 121 gaacaatgaa ttaaatcata tttaaatcct aaatcaaagc caaaaaagca gaaaaccaaa 181 aaacaaaagc aacagcacag gcaaaaaaca aacaaaacga gcgaaagaga cggagagagg 241 cggacagaaa gggagagaaa cagccgagat gcccgtggta aaacagcgga aaatgagccg 301 ctttaagatg tccgccggcg cacagttgca gatggccccg cagaccactt cggccctaag 361 tcaccaccat cccaatcagc agcagcagct gcagccgccg cagcaacagc aggcacagcc 421 cccgcctccg caacagcagc agcactttgc caaccatcac agcgcccagc agcagtcgca 481 gcaacagcag gagcaacaga atccccagca ggcgcaacag cagcaggcgc agcagcagca 541 gatcctcccg cagccgcatc tgcagcacct gcacaagcat ccgcaccagc tgcaactgca 601 ccagcagcag cagcagctcc accagcagca gcaacacttc caccagcagc agcaacagtc 661 gctgcagggg ctgcaccagg gcagcagcaa tccggattcg aatatgagca ctggctcctc 721 gcacagcgag aaggatgtca acgatatgct gagtggcggc ggagcagcgc ccggagtagc 781 tgccgcggca gccattcaac agcaacatcc cgcctttgcg cccgccctgg gaatgcagca 841 gccaccgccg ccgccgccgc agcactccaa taacgggggc gagatgggct acttgacggc 901 gggcacgacc acgacggcct cggtgacggc ggtgggcaag cccaggacgc cggcggagcg 961 gaagcggaag aggaaaatgc cgcagaccag tgcggacgag gcggggagtg gcggtgggtc 1021 cggcggagct ggagcagccg tggtgaacaa cagcagcctg aagggcaaat ccctggcctt 1081 tcgtgatatg cccaaggtga acatgagcct gaatctgggc gatcgtctgg gcggttcggc 1141 cggcagtggc ggcggagccg gaggcgccgg cagcggaggg agtggcgccg gttccggttc 1201 cggcagtggc ggcggcaaga gtgcccgcat catgctgccc gtcagcgaca acaagaagat 1261 caacgactac ttcaacaagc agcaaacggg cgtgggcgtc ggtgtgccag gtggaggtgg 1321 tgcgggaggc aataccgccg gtctccgagg atcccacacg ggtggcggca gcaagtcgcc 1381 ctcatccgcc cagcagcagc agcagacgac ccaacagcag cagcagcagg cgagcggagt 1441 ggcgacgggc ggtggggcag gaggagccgc cgccaaccag caggtgcagg tgcagacgag 1501 cagcgcctac gccctgtatc caccagctag tccccaaacg cagacgccgc agcaacagca 1561 gcagcagcag ccgggagccg acttccacta cgtcaactcc agcaaggcgc agcagcagca 1621 gcaacagcag cagcagcgcc agcagcaaca gacttccaat caaatggttc ctccacacgt 1681 ggtcgtcggc ctgggtggtc atcccctgag cctcgcgtcc atccagcagc agcagcagac 1741 gcccctctcc cagcagcagc agcagcagca gcaacaacag cagcagcaac agcagcaact 1801 gggaccgccg accacatcga cggcctctgt cgtgtccacg catccgcacc agctcggctc 1861 cctgggagtt gtgggcatgg tcggtgtggg cgtcggcgtt ggggtaaatg tgggcgtggg 1921 accgccactg cctccgccac cgccgatggc gatgccggcg gccattatca catacagcaa 1981 ggccacccaa acggaggtct cgctgcacga gctgcaggaa cgcgaggcgg agcacgagtc 2041 gggcaaggtg aagctggacg agatgacgcg gctgtccgac gagcaaaagt gccagattgt 2101 cggcaaccag aagacgatcg accagcacaa gtcgcacatt gccaagtgca ttgatgtggt 2161 caagaagctg ctgaaggaaa agagcagcat cgagaagaag gaggcgcgac agaagtgcat 2221 gcagaaccgc ctgagactcg gccagtttgt gacccagcga gtgggcgcca cattccagga 2281 gaactggacg gacggctatg cgttccagga gctgagtcgg cggcaggagg agataaccgc 2341 cgagcgcgag gagatcgacc ggcagaagaa gcagctgatg aagaagcgtc cggcggagtc 2401 cggacgcaag cgcaacaaca acagcaacca gaacaaccag cagcagcagc agcaacagca 2461 gcaccaacag cagcagcagc agcagaattc caactcgaac gattcctcgc agctgacggg 2521 cggcgttgtc accggaccgg gcagcgatcg cctgggcggc gcggcaggcg gcgttagcgt 2581 cgacagcgga ttgggtggca acaatgcggg cgcaatcggt ggcggagctg tgggcggtgg 2641 cgttggaggc ggcggcgtcg gaagcggcgg cgttggcggt gtcggcggcg gcggaggacg 2701 tggtctatcg cgcagcaact cgacgcaggc caatcaggct caactgctgc acaatggcgg 2761 cggcggatcg gggggcaatg tgggcaactc gggcggcgtc ggcgatcgac tgtcggatcg 2821 aggaggaggc ggcggcctcg ggggcaacga cagcggcagc tgctcggact cgggcacgtt 2881 cctcaagccg gatcccgttt cgggggcata taccgcgcag gagtactacg agtacgatga 2941 gatcctcaag ctgcgccaga atgccctcaa gaaggaggac gccgacctgc agctggagat 3001 ggagaagctg gagcgggagc gcaatctgca catccgagag ctcaagcgga tactcaacga 3061 ggatcagtcc cgcttcaaca accatcccgt gctgaatgat cgctaccttc tgctgatgct 3121 gctgggcaag ggcggcttct cagaggtcca caaggccttc gacctcaagg agcaacgcta 3181 tgtcgcatgt aaggtgcacc aattaaacaa ggattggaag gaggataaga aagctaatta 3241 tatcaaacac gctttgcggg aatacaacat ccacaaggcg ctggatcatc cgcgggtcgt 3301 caagctctac gacgtcttcg agatcgatgc gaattccttt tgcacagtgc tcgaatactg 3361 tgatggccac gatctggact tctatttgaa gcaacataag actatacccg agcgtgaagc 3421 gcgctcgata ataatgcagg ttgtatctgc actcaagtat ctaaatgaga ttaagcctcc 3481 agttatccac tacgatctga agcccggcaa cattctgctc accgagggca atgtctgcgg 3541 cgagatcaag atcaccgact ttggtctgtc gaaggtgatg gacgacgaga actacaatcc 3601 cgatcacggc atggatctga cctcccaggg agccggcact tattggtatc tgccacccga 3661 gtgctttgtg gtgggcaaaa atccgcccaa gatctcctcc aaggtggacg tgtggagtgt 3721 gggcgtgatc ttttaccagt gtctgtacgg caagaagccc ttcggtcata accaatcgca 3781 ggccacgatt ctcgaggaga acacgatcct gaaggccacc gaagtgcagt tctccaacaa 3841 gccaaccgtt tccaatgagg caaagagctt cattcggggc tgcttggcat atcgcaagga 3901 ggatcgcatg gatgtgttcg cgctggccag gcacgagtac atccagccgc cgataccgaa 3961 gcacggccga ggctcgctca accagcagca gcaggcgcag caacagcagc agcaacaaca 4021 gcagcagcag cagcaacagt cgtcgacgtc gcaggccaat tccaccggcc agacttcgtt 4081 ctctgcccac atgtttggca atatgaatca gtcgagttcg tcctagctgc caaccaagcg 4141 taattccaac tcataattcg ccgccgccgc agtagcagca gcaacttcag ctgccagcca 4201 acagcaacac caacagcagc agcagcagca acatcagcag cagcatcttc aactccagca 4261 ataccagccg aatcagcagc tccatttgca aaacagtagc agcaactatg cggccacgct 4321 tctcgatgca gcggcctttt gctacgaaac cgtgatggat gcagcccact tccacaacaa 4381 taacaacaac agcaccatca tcaacaacaa tatgcagaca atgccggcga atgctgtcaa 4441 tgctgctgct gccggaggag gaggagcagg aggagcagca ggaggagggg gaacaccgac 4501 ctaccaaggg aaatacaagc gctggcagca gcaacagttg caacagcagg cgcaactgca 4561 acagcagcaa cacaagctac tgctgcaaca agagctgctg tagagtaaga aaaaaaatac 4621 aagggtgatg atgatttacg acggaataat gacaagggag tttgagagaa ggaggagagc 4681 tgcctgcaac actgccgcca agccaagcta atgttgctgc tgcaacagca acaccgtcag 4741 caacaacaac aacaacagta acaacacccc aagaatttcc gcagcgagtc gcaaaacaac 4801 aacaaaaact taaattaatg aaactatata taaatatata tatgcatata tatattaaat 4861 gtgataaaca agcgtaaagc aaaaaaaaaa atacaaaaca agaaaggaaa gcagcaaata 4921 cagcaggaga aagacgaaca accaaggggg aaaaacccgg aagataggga aaagcaaagc 4981 tgcagcaaaa aaccagaaga gaagagcata gaaagaggga gcagaagaaa agcagaaagt 5041 tgaaagctga gatgaattgc cgaggagaaa gcttgagaaa ttgtttataa aggctgctat 5101 aaacacacac tttttttttt ttgttaacta taaataccaa gcagaataat taatctaaaa 5161 taaataataa ttaaatgcta aatgtaaatt agtaagtagg gtggcatcta aaaacaagag 5221 aagaacgcaa agaacacgat tcccaagaac gcgaaaaggc acataatatt ttttctttgt 5281 attaaaaata ataatggtac cataaagaaa acgtagcaaa ttagcgtagg ctaaatagca 5341 cagtataaaa actgaaacta aaaaaacagt aaaagcagca gaaaaataga aatgattgta 5401 aacacgcaga gcagaggaaa catttgcaat gggaaattac aaattgttgc attgtttttt 5461 gggttatgtt tgtttgtagt tcaaacatta aaataacact catacacaca acacaacaca 5521 acacagcaca gcacacagac actgcagact acttttgcct tacaagaagt gaaaaaaaca 5581 ctaattttaa ttgccaattt ccattttgta tacatgcata ttcaatattg tgtactcgca 5641 tatatacaca catatatata tttatcattt tctacccgcg aatctttctt tttatttttt 5701 taacgtatgc accaacgaac atttaatttt aacgctttta aacgaagtta aaaccaactt 5761 ataccctatc ttaattttga aatggaaaag aaatcattct ttgtttgttt tgtatcaaaa 5821 tccaaaagaa atttaattta aaaataaaat taaaaaatac catcaatcac acaccgcaca 5881 cacatataca tttgtatata ctcgtatctg aacgacaaac aaaaaaccga agcgataaaa 5941 actaaaaact taatcaaacg aaatgcaatt ccaaaatatc caagagaaaa agaatcagat 6001 aaccattttt tttatatgcc acaagaaaaa cgctaagaac atgagaaacg gcgagaaaaa 6061 tcgatggaag gggaaaagct agagatcagg ttctcagatc ggatcagaaa atcggcagaa 6121 aaataaaccc atttgaagta atctacttct aattacatag taaactaatg taatagtttt 6181 tattaaatat atatatatat atgtatcgat atatatatac atacatgttt tttttttaat 6241 tttaaaacta tatttgtaat gcactatgcg taacattgta ttaaatatta atatccaagg 6301 catattaata gaaatatata tataaacata aaaaaccaga aaaaagaaca tgaactacca 6361 acctaaatgt ttcaataata tatagatcta tatgtatgta aaaccgatat gaaatctgcc 6421 taatgccaga caaaaaaaaa ccctacaaga gaaagttgaa agctccgaag agtgaaagag 6481 tgaaagagat gga