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LOCUS XM_017138083 6466 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_017138083 VERSION XM_017138083.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138083.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6466 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6466 /gene="Tlk" /note="Tousled-like kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054955" CDS 212..4099 /gene="Tlk" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X3" /protein_id="XP_016993572.2" /db_xref="GeneID:108054955" /translation="MRSKRNTSDLGLLQRTCIVGGKSMSAGAQLQMAPQTTSALSHHH PNQQQQLQPPQQQQAQPPPPQQQQHFANHHSAQQQSQQQQEQQNPQQAQQQQAQQQQI LPQPHLQHLHKHPHQLQLHQQQQQLHQQQQHFHQQQQQSLQGLHQGSSNPDSNMSTGS SHSEKDVNDMLSGGGAAPGVAAAAAIQQQHPAFAPALGMQQPPPPPPQHSNNGGEMGY LTAGTTTTASVTAVGKPRTPAERKRKRKMPQTSADEAGSGGGSGGAGAAVVNNSSLKG KSLAFRDMPKVNMSLNLGDRLGGSAGSGGGAGGAGSGGSGAGSGSGSGGGKSARIMLP VSDNKKINDYFNKQQTGVGVGVPGGGGAGGNTAGLRGSHTGGGSKSPSSAQQQQQTTQ QQQQQASGVATGGGAGGAAANQQVQVQTSSAYALYPPASPQTQTPQQQQQQQPGADFH YVNSSKAQQQQQQQQQRQQQQTSNQMVPPHVVVGLGGHPLSLASIQQQQQTPLSQQQQ QQQQQQQQQQQQLGPPTTSTASVVSTHPHQLGSLGVVGMVGVGVGVGVNVGVGPPLPP PPPMAMPAAIITYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSDEQKCQIVGNQ KTIDQHKSHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQEN WTDGYAFQELSRRQEEITAEREEIDRQKKQLMKKRPAESGRKRNNNSNQNNQQQQQQQ QHQQQQQQQNSNSNDSSQLTGGVVTGPGSDRLGGAAGGVSVDSGLGGNNAGAIGGGAV GGGVGGGGVGSGGVGGVGGGGGRGLSRSNSTQANQAQLLHNGGGGSGGNVGNSGGVGD RLSDRGGGGGLGGNDSGSCSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKED ADLQLEMEKLERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHK AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEID ANSFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLK PGNILLTEGNVCGEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVG KNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTV SNEAKSFIRGCLAYRKEDRMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQ QQQQQSSTSQANSTGQTSFSAHMFGNMNQSSSS" misc_feature <1952..>2362 /gene="Tlk" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 3110..3913 /gene="Tlk" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(3119..3121,3158..3160,3164..3166,3272..3274, 3323..3334,3344..3346,3350..3352,3467..3469,3473..3475, 3479..3484,3488..3490,3530..3532,3539..3541,3608..3619) /gene="Tlk" /note="active site" /db_xref="CDD:270892" misc_feature order(3344..3346,3350..3352,3467..3469,3473..3475, 3479..3481,3539..3541,3608..3619) /gene="Tlk" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3527..3565,3578..3619) /gene="Tlk" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" polyA_site 6466 /gene="Tlk" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaggggggaa atcgttcttt tttttctgtg cacttcattt agttttctga ttaaatattc 61 aaacaaacaa gaaaggaata cgaatacata catactccaa attcgtaact acaagtgaaa 121 aaccagcttg tgtgttatgt gtgtgtacaa ttgttgaaaa ttgtgaaaag caaaaaaaac 181 cgaaaagcga ggaaaaatca gcagccgaag aatgcgcagc aaacgaaata ccagcgattt 241 gggcctattg cagcgcacct gcattgttgg cggaaaatcg atgtccgccg gcgcacagtt 301 gcagatggcc ccgcagacca cttcggccct aagtcaccac catcccaatc agcagcagca 361 gctgcagccg ccgcagcaac agcaggcaca gcccccgcct ccgcaacagc agcagcactt 421 tgccaaccat cacagcgccc agcagcagtc gcagcaacag caggagcaac agaatcccca 481 gcaggcgcaa cagcagcagg cgcagcagca gcagatcctc ccgcagccgc atctgcagca 541 cctgcacaag catccgcacc agctgcaact gcaccagcag cagcagcagc tccaccagca 601 gcagcaacac ttccaccagc agcagcaaca gtcgctgcag gggctgcacc agggcagcag 661 caatccggat tcgaatatga gcactggctc ctcgcacagc gagaaggatg tcaacgatat 721 gctgagtggc ggcggagcag cgcccggagt agctgccgcg gcagccattc aacagcaaca 781 tcccgccttt gcgcccgccc tgggaatgca gcagccaccg ccgccgccgc cgcagcactc 841 caataacggg ggcgagatgg gctacttgac ggcgggcacg accacgacgg cctcggtgac 901 ggcggtgggc aagcccagga cgccggcgga gcggaagcgg aagaggaaaa tgccgcagac 961 cagtgcggac gaggcgggga gtggcggtgg gtccggcgga gctggagcag ccgtggtgaa 1021 caacagcagc ctgaagggca aatccctggc ctttcgtgat atgcccaagg tgaacatgag 1081 cctgaatctg ggcgatcgtc tgggcggttc ggccggcagt ggcggcggag ccggaggcgc 1141 cggcagcgga gggagtggcg ccggttccgg ttccggcagt ggcggcggca agagtgcccg 1201 catcatgctg cccgtcagcg acaacaagaa gatcaacgac tacttcaaca agcagcaaac 1261 gggcgtgggc gtcggtgtgc caggtggagg tggtgcggga ggcaataccg ccggtctccg 1321 aggatcccac acgggtggcg gcagcaagtc gccctcatcc gcccagcagc agcagcagac 1381 gacccaacag cagcagcagc aggcgagcgg agtggcgacg ggcggtgggg caggaggagc 1441 cgccgccaac cagcaggtgc aggtgcagac gagcagcgcc tacgccctgt atccaccagc 1501 tagtccccaa acgcagacgc cgcagcaaca gcagcagcag cagccgggag ccgacttcca 1561 ctacgtcaac tccagcaagg cgcagcagca gcagcaacag cagcagcagc gccagcagca 1621 acagacttcc aatcaaatgg ttcctccaca cgtggtcgtc ggcctgggtg gtcatcccct 1681 gagcctcgcg tccatccagc agcagcagca gacgcccctc tcccagcagc agcagcagca 1741 gcagcaacaa cagcagcagc aacagcagca actgggaccg ccgaccacat cgacggcctc 1801 tgtcgtgtcc acgcatccgc accagctcgg ctccctggga gttgtgggca tggtcggtgt 1861 gggcgtcggc gttggggtaa atgtgggcgt gggaccgcca ctgcctccgc caccgccgat 1921 ggcgatgccg gcggccatta tcacatacag caaggccacc caaacggagg tctcgctgca 1981 cgagctgcag gaacgcgagg cggagcacga gtcgggcaag gtgaagctgg acgagatgac 2041 gcggctgtcc gacgagcaaa agtgccagat tgtcggcaac cagaagacga tcgaccagca 2101 caagtcgcac attgccaagt gcattgatgt ggtcaagaag ctgctgaagg aaaagagcag 2161 catcgagaag aaggaggcgc gacagaagtg catgcagaac cgcctgagac tcggccagtt 2221 tgtgacccag cgagtgggcg ccacattcca ggagaactgg acggacggct atgcgttcca 2281 ggagctgagt cggcggcagg aggagataac cgccgagcgc gaggagatcg accggcagaa 2341 gaagcagctg atgaagaagc gtccggcgga gtccggacgc aagcgcaaca acaacagcaa 2401 ccagaacaac cagcagcagc agcagcaaca gcagcaccaa cagcagcagc agcagcagaa 2461 ttccaactcg aacgattcct cgcagctgac gggcggcgtt gtcaccggac cgggcagcga 2521 tcgcctgggc ggcgcggcag gcggcgttag cgtcgacagc ggattgggtg gcaacaatgc 2581 gggcgcaatc ggtggcggag ctgtgggcgg tggcgttgga ggcggcggcg tcggaagcgg 2641 cggcgttggc ggtgtcggcg gcggcggagg acgtggtcta tcgcgcagca actcgacgca 2701 ggccaatcag gctcaactgc tgcacaatgg cggcggcgga tcggggggca atgtgggcaa 2761 ctcgggcggc gtcggcgatc gactgtcgga tcgaggagga ggcggcggcc tcgggggcaa 2821 cgacagcggc agctgctcgg actcgggcac gttcctcaag ccggatcccg tttcgggggc 2881 atataccgcg caggagtact acgagtacga tgagatcctc aagctgcgcc agaatgccct 2941 caagaaggag gacgccgacc tgcagctgga gatggagaag ctggagcggg agcgcaatct 3001 gcacatccga gagctcaagc ggatactcaa cgaggatcag tcccgcttca acaaccatcc 3061 cgtgctgaat gatcgctacc ttctgctgat gctgctgggc aagggcggct tctcagaggt 3121 ccacaaggcc ttcgacctca aggagcaacg ctatgtcgca tgtaaggtgc accaattaaa 3181 caaggattgg aaggaggata agaaagctaa ttatatcaaa cacgctttgc gggaatacaa 3241 catccacaag gcgctggatc atccgcgggt cgtcaagctc tacgacgtct tcgagatcga 3301 tgcgaattcc ttttgcacag tgctcgaata ctgtgatggc cacgatctgg acttctattt 3361 gaagcaacat aagactatac ccgagcgtga agcgcgctcg ataataatgc aggttgtatc 3421 tgcactcaag tatctaaatg agattaagcc tccagttatc cactacgatc tgaagcccgg 3481 caacattctg ctcaccgagg gcaatgtctg cggcgagatc aagatcaccg actttggtct 3541 gtcgaaggtg atggacgacg agaactacaa tcccgatcac ggcatggatc tgacctccca 3601 gggagccggc acttattggt atctgccacc cgagtgcttt gtggtgggca aaaatccgcc 3661 caagatctcc tccaaggtgg acgtgtggag tgtgggcgtg atcttttacc agtgtctgta 3721 cggcaagaag cccttcggtc ataaccaatc gcaggccacg attctcgagg agaacacgat 3781 cctgaaggcc accgaagtgc agttctccaa caagccaacc gtttccaatg aggcaaagag 3841 cttcattcgg ggctgcttgg catatcgcaa ggaggatcgc atggatgtgt tcgcgctggc 3901 caggcacgag tacatccagc cgccgatacc gaagcacggc cgaggctcgc tcaaccagca 3961 gcagcaggcg cagcaacagc agcagcaaca acagcagcag cagcagcaac agtcgtcgac 4021 gtcgcaggcc aattccaccg gccagacttc gttctctgcc cacatgtttg gcaatatgaa 4081 tcagtcgagt tcgtcctagc tgccaaccaa gcgtaattcc aactcataat tcgccgccgc 4141 cgcagtagca gcagcaactt cagctgccag ccaacagcaa caccaacagc agcagcagca 4201 gcaacatcag cagcagcatc ttcaactcca gcaataccag ccgaatcagc agctccattt 4261 gcaaaacagt agcagcaact atgcggccac gcttctcgat gcagcggcct tttgctacga 4321 aaccgtgatg gatgcagccc acttccacaa caataacaac aacagcacca tcatcaacaa 4381 caatatgcag acaatgccgg cgaatgctgt caatgctgct gctgccggag gaggaggagc 4441 aggaggagca gcaggaggag ggggaacacc gacctaccaa gggaaataca agcgctggca 4501 gcagcaacag ttgcaacagc aggcgcaact gcaacagcag caacacaagc tactgctgca 4561 acaagagctg ctgtagagta agaaaaaaaa tacaagggtg atgatgattt acgacggaat 4621 aatgacaagg gagtttgaga gaaggaggag agctgcctgc aacactgccg ccaagccaag 4681 ctaatgttgc tgctgcaaca gcaacaccgt cagcaacaac aacaacaaca gtaacaacac 4741 cccaagaatt tccgcagcga gtcgcaaaac aacaacaaaa acttaaatta atgaaactat 4801 atataaatat atatatgcat atatatatta aatgtgataa acaagcgtaa agcaaaaaaa 4861 aaaatacaaa acaagaaagg aaagcagcaa atacagcagg agaaagacga acaaccaagg 4921 gggaaaaacc cggaagatag ggaaaagcaa agctgcagca aaaaaccaga agagaagagc 4981 atagaaagag ggagcagaag aaaagcagaa agttgaaagc tgagatgaat tgccgaggag 5041 aaagcttgag aaattgttta taaaggctgc tataaacaca cacttttttt tttttgttaa 5101 ctataaatac caagcagaat aattaatcta aaataaataa taattaaatg ctaaatgtaa 5161 attagtaagt agggtggcat ctaaaaacaa gagaagaacg caaagaacac gattcccaag 5221 aacgcgaaaa ggcacataat attttttctt tgtattaaaa ataataatgg taccataaag 5281 aaaacgtagc aaattagcgt aggctaaata gcacagtata aaaactgaaa ctaaaaaaac 5341 agtaaaagca gcagaaaaat agaaatgatt gtaaacacgc agagcagagg aaacatttgc 5401 aatgggaaat tacaaattgt tgcattgttt tttgggttat gtttgtttgt agttcaaaca 5461 ttaaaataac actcatacac acaacacaac acaacacagc acagcacaca gacactgcag 5521 actacttttg ccttacaaga agtgaaaaaa acactaattt taattgccaa tttccatttt 5581 gtatacatgc atattcaata ttgtgtactc gcatatatac acacatatat atatttatca 5641 ttttctaccc gcgaatcttt ctttttattt ttttaacgta tgcaccaacg aacatttaat 5701 tttaacgctt ttaaacgaag ttaaaaccaa cttataccct atcttaattt tgaaatggaa 5761 aagaaatcat tctttgtttg ttttgtatca aaatccaaaa gaaatttaat ttaaaaataa 5821 aattaaaaaa taccatcaat cacacaccgc acacacatat acatttgtat atactcgtat 5881 ctgaacgaca aacaaaaaac cgaagcgata aaaactaaaa acttaatcaa acgaaatgca 5941 attccaaaat atccaagaga aaaagaatca gataaccatt ttttttatat gccacaagaa 6001 aaacgctaag aacatgagaa acggcgagaa aaatcgatgg aaggggaaaa gctagagatc 6061 aggttctcag atcggatcag aaaatcggca gaaaaataaa cccatttgaa gtaatctact 6121 tctaattaca tagtaaacta atgtaatagt ttttattaaa tatatatata tatatgtatc 6181 gatatatata tacatacatg tttttttttt aattttaaaa ctatatttgt aatgcactat 6241 gcgtaacatt gtattaaata ttaatatcca aggcatatta atagaaatat atatataaac 6301 ataaaaaacc agaaaaaaga acatgaacta ccaacctaaa tgtttcaata atatatagat 6361 ctatatgtat gtaaaaccga tatgaaatct gcctaatgcc agacaaaaaa aaaccctaca 6421 agagaaagtt gaaagctccg aagagtgaaa gagtgaaaga gatgga