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LOCUS XM_017138082 6753 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017138082 VERSION XM_017138082.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138082.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6753 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6753 /gene="Tlk" /note="Tousled-like kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:108054955" CDS 496..4386 /gene="Tlk" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X2" /protein_id="XP_016993571.2" /db_xref="GeneID:108054955" /translation="MDQFQTSLNPRKQELLEARFIGVRMSAGAQLQMAPQTTSALSHH HPNQQQQLQPPQQQQAQPPPPQQQQHFANHHSAQQQSQQQQEQQNPQQAQQQQAQQQQ ILPQPHLQHLHKHPHQLQLHQQQQQLHQQQQHFHQQQQQSLQGLHQGSSNPDSNMSTG SSHSEKDVNDMLSGGGAAPGVAAAAAIQQQHPAFAPALGMQQPPPPPPQHSNNGGEMG YLTAGTTTTASVTAVGKPRTPAERKRKRKMPQTSADEAGSGGGSGGAGAAVVNNSSLK GKSLAFRDMPKVNMSLNLGDRLGGSAGSGGGAGGAGSGGSGAGSGSGSGGGKSARIML PVSDNKKINDYFNKQQTGVGVGVPGGGGAGGNTAGLRGSHTGGGSKSPSSAQQQQQTT QQQQQQASGVATGGGAGGAAANQQVQVQTSSAYALYPPASPQTQTPQQQQQQQPGADF HYVNSSKAQQQQQQQQQRQQQQTSNQMVPPHVVVGLGGHPLSLASIQQQQQTPLSQQQ QQQQQQQQQQQQQLGPPTTSTASVVSTHPHQLGSLGVVGMVGVGVGVGVNVGVGPPLP PPPPMAMPAAIITYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSDEQKCQIVGN QKTIDQHKSHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQE NWTDGYAFQELSRRQEEITAEREEIDRQKKQLMKKRPAESGRKRNNNSNQNNQQQQQQ QQHQQQQQQQNSNSNDSSQLTGGVVTGPGSDRLGGAAGGVSVDSGLGGNNAGAIGGGA VGGGVGGGGVGSGGVGGVGGGGGRGLSRSNSTQANQAQLLHNGGGGSGGNVGNSGGVG DRLSDRGGGGGLGGNDSGSCSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKE DADLQLEMEKLERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVH KAFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEI DANSFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDL KPGNILLTEGNVCGEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVV GKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPT VSNEAKSFIRGCLAYRKEDRMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQ QQQQQQSSTSQANSTGQTSFSAHMFGNMNQSSSS" misc_feature <2239..>2649 /gene="Tlk" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 3397..4200 /gene="Tlk" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(3406..3408,3445..3447,3451..3453,3559..3561, 3610..3621,3631..3633,3637..3639,3754..3756,3760..3762, 3766..3771,3775..3777,3817..3819,3826..3828,3895..3906) /gene="Tlk" /note="active site" /db_xref="CDD:270892" misc_feature order(3631..3633,3637..3639,3754..3756,3760..3762, 3766..3768,3826..3828,3895..3906) /gene="Tlk" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3814..3852,3865..3906) /gene="Tlk" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" polyA_site 6753 /gene="Tlk" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atatttttag cccatttctg cgtgtgtgcg ttcgtgtgaa tattgtgaat atttttttac 61 tgtgacaaaa tagacgaaaa tcggctgtgg aaaaccgaag taaacacatt tagggatcat 121 ggcgattggc ccttaaccct tgagtgccgt gccggcagtg ccacgccaca aaaattccaa 181 tacaaatcga aatcgcagaa aaaaacaaca aaaacgccaa gtttatgtct ttaactttaa 241 agtttgggac aatccgatcc gatcggaagc ggaacatata ggctggctat actatatggt 301 atgatgaatt tgctatttta ttgctatggc tctgacaaat cttgtcgcat taattgccga 361 catttgcaat cgatcataaa atcaatccta aaatgttaaa taagtaaaac attcaaagac 421 caaacaaaat ctcagaaaaa actatcatat ctataaacaa ataaaattcg cattggaaaa 481 aacaatcata ttgcaatgga tcaatttcaa acttcgctga atccacgaaa acaggagctt 541 ttggaggctc gatttattgg agtgaggatg tccgccggcg cacagttgca gatggccccg 601 cagaccactt cggccctaag tcaccaccat cccaatcagc agcagcagct gcagccgccg 661 cagcaacagc aggcacagcc cccgcctccg caacagcagc agcactttgc caaccatcac 721 agcgcccagc agcagtcgca gcaacagcag gagcaacaga atccccagca ggcgcaacag 781 cagcaggcgc agcagcagca gatcctcccg cagccgcatc tgcagcacct gcacaagcat 841 ccgcaccagc tgcaactgca ccagcagcag cagcagctcc accagcagca gcaacacttc 901 caccagcagc agcaacagtc gctgcagggg ctgcaccagg gcagcagcaa tccggattcg 961 aatatgagca ctggctcctc gcacagcgag aaggatgtca acgatatgct gagtggcggc 1021 ggagcagcgc ccggagtagc tgccgcggca gccattcaac agcaacatcc cgcctttgcg 1081 cccgccctgg gaatgcagca gccaccgccg ccgccgccgc agcactccaa taacgggggc 1141 gagatgggct acttgacggc gggcacgacc acgacggcct cggtgacggc ggtgggcaag 1201 cccaggacgc cggcggagcg gaagcggaag aggaaaatgc cgcagaccag tgcggacgag 1261 gcggggagtg gcggtgggtc cggcggagct ggagcagccg tggtgaacaa cagcagcctg 1321 aagggcaaat ccctggcctt tcgtgatatg cccaaggtga acatgagcct gaatctgggc 1381 gatcgtctgg gcggttcggc cggcagtggc ggcggagccg gaggcgccgg cagcggaggg 1441 agtggcgccg gttccggttc cggcagtggc ggcggcaaga gtgcccgcat catgctgccc 1501 gtcagcgaca acaagaagat caacgactac ttcaacaagc agcaaacggg cgtgggcgtc 1561 ggtgtgccag gtggaggtgg tgcgggaggc aataccgccg gtctccgagg atcccacacg 1621 ggtggcggca gcaagtcgcc ctcatccgcc cagcagcagc agcagacgac ccaacagcag 1681 cagcagcagg cgagcggagt ggcgacgggc ggtggggcag gaggagccgc cgccaaccag 1741 caggtgcagg tgcagacgag cagcgcctac gccctgtatc caccagctag tccccaaacg 1801 cagacgccgc agcaacagca gcagcagcag ccgggagccg acttccacta cgtcaactcc 1861 agcaaggcgc agcagcagca gcaacagcag cagcagcgcc agcagcaaca gacttccaat 1921 caaatggttc ctccacacgt ggtcgtcggc ctgggtggtc atcccctgag cctcgcgtcc 1981 atccagcagc agcagcagac gcccctctcc cagcagcagc agcagcagca gcaacaacag 2041 cagcagcaac agcagcaact gggaccgccg accacatcga cggcctctgt cgtgtccacg 2101 catccgcacc agctcggctc cctgggagtt gtgggcatgg tcggtgtggg cgtcggcgtt 2161 ggggtaaatg tgggcgtggg accgccactg cctccgccac cgccgatggc gatgccggcg 2221 gccattatca catacagcaa ggccacccaa acggaggtct cgctgcacga gctgcaggaa 2281 cgcgaggcgg agcacgagtc gggcaaggtg aagctggacg agatgacgcg gctgtccgac 2341 gagcaaaagt gccagattgt cggcaaccag aagacgatcg accagcacaa gtcgcacatt 2401 gccaagtgca ttgatgtggt caagaagctg ctgaaggaaa agagcagcat cgagaagaag 2461 gaggcgcgac agaagtgcat gcagaaccgc ctgagactcg gccagtttgt gacccagcga 2521 gtgggcgcca cattccagga gaactggacg gacggctatg cgttccagga gctgagtcgg 2581 cggcaggagg agataaccgc cgagcgcgag gagatcgacc ggcagaagaa gcagctgatg 2641 aagaagcgtc cggcggagtc cggacgcaag cgcaacaaca acagcaacca gaacaaccag 2701 cagcagcagc agcaacagca gcaccaacag cagcagcagc agcagaattc caactcgaac 2761 gattcctcgc agctgacggg cggcgttgtc accggaccgg gcagcgatcg cctgggcggc 2821 gcggcaggcg gcgttagcgt cgacagcgga ttgggtggca acaatgcggg cgcaatcggt 2881 ggcggagctg tgggcggtgg cgttggaggc ggcggcgtcg gaagcggcgg cgttggcggt 2941 gtcggcggcg gcggaggacg tggtctatcg cgcagcaact cgacgcaggc caatcaggct 3001 caactgctgc acaatggcgg cggcggatcg gggggcaatg tgggcaactc gggcggcgtc 3061 ggcgatcgac tgtcggatcg aggaggaggc ggcggcctcg ggggcaacga cagcggcagc 3121 tgctcggact cgggcacgtt cctcaagccg gatcccgttt cgggggcata taccgcgcag 3181 gagtactacg agtacgatga gatcctcaag ctgcgccaga atgccctcaa gaaggaggac 3241 gccgacctgc agctggagat ggagaagctg gagcgggagc gcaatctgca catccgagag 3301 ctcaagcgga tactcaacga ggatcagtcc cgcttcaaca accatcccgt gctgaatgat 3361 cgctaccttc tgctgatgct gctgggcaag ggcggcttct cagaggtcca caaggccttc 3421 gacctcaagg agcaacgcta tgtcgcatgt aaggtgcacc aattaaacaa ggattggaag 3481 gaggataaga aagctaatta tatcaaacac gctttgcggg aatacaacat ccacaaggcg 3541 ctggatcatc cgcgggtcgt caagctctac gacgtcttcg agatcgatgc gaattccttt 3601 tgcacagtgc tcgaatactg tgatggccac gatctggact tctatttgaa gcaacataag 3661 actatacccg agcgtgaagc gcgctcgata ataatgcagg ttgtatctgc actcaagtat 3721 ctaaatgaga ttaagcctcc agttatccac tacgatctga agcccggcaa cattctgctc 3781 accgagggca atgtctgcgg cgagatcaag atcaccgact ttggtctgtc gaaggtgatg 3841 gacgacgaga actacaatcc cgatcacggc atggatctga cctcccaggg agccggcact 3901 tattggtatc tgccacccga gtgctttgtg gtgggcaaaa atccgcccaa gatctcctcc 3961 aaggtggacg tgtggagtgt gggcgtgatc ttttaccagt gtctgtacgg caagaagccc 4021 ttcggtcata accaatcgca ggccacgatt ctcgaggaga acacgatcct gaaggccacc 4081 gaagtgcagt tctccaacaa gccaaccgtt tccaatgagg caaagagctt cattcggggc 4141 tgcttggcat atcgcaagga ggatcgcatg gatgtgttcg cgctggccag gcacgagtac 4201 atccagccgc cgataccgaa gcacggccga ggctcgctca accagcagca gcaggcgcag 4261 caacagcagc agcaacaaca gcagcagcag cagcaacagt cgtcgacgtc gcaggccaat 4321 tccaccggcc agacttcgtt ctctgcccac atgtttggca atatgaatca gtcgagttcg 4381 tcctagctgc caaccaagcg taattccaac tcataattcg ccgccgccgc agtagcagca 4441 gcaacttcag ctgccagcca acagcaacac caacagcagc agcagcagca acatcagcag 4501 cagcatcttc aactccagca ataccagccg aatcagcagc tccatttgca aaacagtagc 4561 agcaactatg cggccacgct tctcgatgca gcggcctttt gctacgaaac cgtgatggat 4621 gcagcccact tccacaacaa taacaacaac agcaccatca tcaacaacaa tatgcagaca 4681 atgccggcga atgctgtcaa tgctgctgct gccggaggag gaggagcagg aggagcagca 4741 ggaggagggg gaacaccgac ctaccaaggg aaatacaagc gctggcagca gcaacagttg 4801 caacagcagg cgcaactgca acagcagcaa cacaagctac tgctgcaaca agagctgctg 4861 tagagtaaga aaaaaaatac aagggtgatg atgatttacg acggaataat gacaagggag 4921 tttgagagaa ggaggagagc tgcctgcaac actgccgcca agccaagcta atgttgctgc 4981 tgcaacagca acaccgtcag caacaacaac aacaacagta acaacacccc aagaatttcc 5041 gcagcgagtc gcaaaacaac aacaaaaact taaattaatg aaactatata taaatatata 5101 tatgcatata tatattaaat gtgataaaca agcgtaaagc aaaaaaaaaa atacaaaaca 5161 agaaaggaaa gcagcaaata cagcaggaga aagacgaaca accaaggggg aaaaacccgg 5221 aagataggga aaagcaaagc tgcagcaaaa aaccagaaga gaagagcata gaaagaggga 5281 gcagaagaaa agcagaaagt tgaaagctga gatgaattgc cgaggagaaa gcttgagaaa 5341 ttgtttataa aggctgctat aaacacacac tttttttttt ttgttaacta taaataccaa 5401 gcagaataat taatctaaaa taaataataa ttaaatgcta aatgtaaatt agtaagtagg 5461 gtggcatcta aaaacaagag aagaacgcaa agaacacgat tcccaagaac gcgaaaaggc 5521 acataatatt ttttctttgt attaaaaata ataatggtac cataaagaaa acgtagcaaa 5581 ttagcgtagg ctaaatagca cagtataaaa actgaaacta aaaaaacagt aaaagcagca 5641 gaaaaataga aatgattgta aacacgcaga gcagaggaaa catttgcaat gggaaattac 5701 aaattgttgc attgtttttt gggttatgtt tgtttgtagt tcaaacatta aaataacact 5761 catacacaca acacaacaca acacagcaca gcacacagac actgcagact acttttgcct 5821 tacaagaagt gaaaaaaaca ctaattttaa ttgccaattt ccattttgta tacatgcata 5881 ttcaatattg tgtactcgca tatatacaca catatatata tttatcattt tctacccgcg 5941 aatctttctt tttatttttt taacgtatgc accaacgaac atttaatttt aacgctttta 6001 aacgaagtta aaaccaactt ataccctatc ttaattttga aatggaaaag aaatcattct 6061 ttgtttgttt tgtatcaaaa tccaaaagaa atttaattta aaaataaaat taaaaaatac 6121 catcaatcac acaccgcaca cacatataca tttgtatata ctcgtatctg aacgacaaac 6181 aaaaaaccga agcgataaaa actaaaaact taatcaaacg aaatgcaatt ccaaaatatc 6241 caagagaaaa agaatcagat aaccattttt tttatatgcc acaagaaaaa cgctaagaac 6301 atgagaaacg gcgagaaaaa tcgatggaag gggaaaagct agagatcagg ttctcagatc 6361 ggatcagaaa atcggcagaa aaataaaccc atttgaagta atctacttct aattacatag 6421 taaactaatg taatagtttt tattaaatat atatatatat atgtatcgat atatatatac 6481 atacatgttt tttttttaat tttaaaacta tatttgtaat gcactatgcg taacattgta 6541 ttaaatatta atatccaagg catattaata gaaatatata tataaacata aaaaaccaga 6601 aaaaagaaca tgaactacca acctaaatgt ttcaataata tatagatcta tatgtatgta 6661 aaaccgatat gaaatctgcc taatgccaga caaaaaaaaa ccctacaaga gaaagttgaa 6721 agctccgaag agtgaaagag tgaaagagat gga