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LOCUS XM_013260844 2429 bp mRNA linear INV 02-SEP-2023 catalytic subunit alpha-2 (LOC106093713), mRNA. ACCESSION XM_013260844 VERSION XM_013260844.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260844.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2429 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2429 /gene="LOC106093713" /note="5'-AMP-activated protein kinase catalytic subunit alpha-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins" /db_xref="GeneID:106093713" CDS 473..2158 /gene="LOC106093713" /codon_start=1 /product="5'-AMP-activated protein kinase catalytic subunit alpha-2" /protein_id="XP_013116298.1" /db_xref="GeneID:106093713" /translation="MANPRASVAAEVVHHSGPQPLVKIGHYLLGNTLGTGTFGKVKIG EHQMTKHKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPTDIFM IMEYVSGGELFDYIVKHGKLQEHEARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDH NRHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL LCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKTVVNLVCQMLQVDPLKRANIEEIKKH EWFQKDLPSYLFPSSIEQDSNVIDTYAVSEVCTKFGVKEQEVHNALLSGDPHDQLAIA YHLIIDNKRFADEAAKTEINNFFVAGSPPPAAHSPNEAPDVNFGVGSSSGNSTPGRTS LTPSMKPHPERIAPLRERQLAMAVQAQGGGAFPEKTARGTPIKRAKWHLGIRSQSKPN DIMLEVYRAMKALDYEWKIINPYHVRVRRQNIKNGIYSKMSLQLYQVDAKSYLLDFKS LTNDEVEQGDDVILESLTPPPLSTSGIMPPQPTGHHTMEFFEMCAALIIQLAR" misc_feature 542..1309 /gene="LOC106093713" /note="Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase; Region: STKc_AMPK_alpha; cd14079" /db_xref="CDD:270981" misc_feature order(569..583,593..595,632..634,638..640,734..736, 782..793,803..805,809..814,818..820,917..922,926..928, 932..937,941..943,971..976,983..985,1025..1039,1043..1045, 1133..1144) /gene="LOC106093713" /note="active site" /db_xref="CDD:270981" misc_feature order(569..580,593..595,632..634,638..640,734..736, 782..793,803..805,932..937,941..943,971..976) /gene="LOC106093713" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270981" misc_feature order(803..805,809..814,818..820,920..922,926..928, 932..934,983..985,1025..1039,1043..1045,1133..1144) /gene="LOC106093713" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270981" misc_feature 971..1039 /gene="LOC106093713" /note="activation loop (A-loop); other site" /db_xref="CDD:270981" misc_feature order(995..1012,1067..1072,1076..1078,1085..1087, 1265..1267) /gene="LOC106093713" /note="heterotrimer interface [polypeptide binding]; other site" /db_xref="CDD:270981" misc_feature 1358..1552 /gene="LOC106093713" /note="UBA-like autoinhibitory domain (AID) found in vertebrate 5'-AMP-activated protein kinase catalytic alpha (AMPKalpha) subunits; Region: UBA_AID_AMPKalpha; cd14336" /db_xref="CDD:270521" misc_feature 1778..2149 /gene="LOC106093713" /note="C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK) alpha catalytic subunit; Region: AMPKA_C; cd12122" /db_xref="CDD:213378" misc_feature order(1781..1798,1817..1822,1832..1834,1841..1846, 1853..1855,1865..1873,1877..1891,1898..1906,1937..1939, 1949..1963,1976..1981,1985..1996,2099..2101,2105..2110, 2114..2122,2126..2131,2138..2143) /gene="LOC106093713" /note="beta subunit interface [polypeptide binding]; other site" /db_xref="CDD:213378" misc_feature order(1913..1915,2099..2104,2108..2113,2120..2122) /gene="LOC106093713" /note="gamma subunit interface [polypeptide binding]; other site" /db_xref="CDD:213378" polyA_site 2429 /gene="LOC106093713" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcatggaaa ataaccacca attgtcaaaa tttgcaagct tgaacgagat cgcctaattt 61 cagaaattca gaaaaagcaa cgttaacaat aagaaaaaca ctttaaattt gttacaaacg 121 taacctctta aatgtgtgtg gatagaaatt atcaaaaaat ctacgctcct ttcaagggct 181 caccatagaa aggcttttag aagttgcagc acctccaaca tctctcgcaa caaaagaaca 241 caacgacgac atagttggtg ttgagtaatt taaggcaaca ccaccacacc acccaacaca 301 cacatacact cccgcccctt tactacgcct agaactgctg ctcaacgaca gtcgcacgtc 361 gaatagaaca aggaagcaat tacaagtgca aacaagacga acgaaaggga atttcttgta 421 ttattcaacg aaggccgcat agcgaaggta aactagaaat ctatctacca agatggcaaa 481 tcctagagca tcggtggcag ccgaggtggt ccatcacagt ggcccacagc ctttggtcaa 541 aattggccat tatctgctgg gcaacacttt gggtacggga acttttggca aagtgaaaat 601 aggcgaacat caaatgacca agcacaaggt ggctgtaaag attttgaaca ggcaaaagat 661 taagtccttg gatgtggtgg gcaagatcag gcgtgagata cagaatctaa agctctttag 721 acatccccat attatcaagt tgtatcaggt gatatcgaca cccactgata ttttcatgat 781 tatggaatat gtaagtggcg gtgagctttt cgattacatt gttaagcatg ggaaactgca 841 ggagcatgag gcccgtagat ttttccagca aattatttcg ggagtagact attgtcatcg 901 ccacatgatt gtacatcgtg acttgaaacc tgaaaatttg ctattggatc acaatcgtca 961 tgtgaaaatc gccgattttg gcttgtccaa tatgatgttg gatggtgagt tcctgagaac 1021 ttcttgtggt tctcccaact atgctgctcc ggaggttatc tcgggtaaat tgtatgctgg 1081 ccctgaggtg gatatctggt cttgtggtgt catactatat gccctgttgt gtggcacctt 1141 gccctttgat gatgaacatg tgcccacatt gttccgtaaa attaaatcag gcatatttcc 1201 cataccagag tatctcaata agacggtggt caatctggta tgtcaaatgt tgcaagtgga 1261 tcctttgaag agagccaata tagaagaaat caagaaacat gaatggttcc aaaaagattt 1321 gccctcatat ttgttccctt catccatcga acaggattcg aatgtcatcg atacctatgc 1381 agtgtcagag gtgtgcacca aatttggggt aaaagaacag gaagtgcata atgccctttt 1441 gagtggagat ccccatgatc agctggccat tgcctatcat ttgattatag ataacaaaag 1501 atttgccgat gaggcagcca aaacagagat aaataacttc tttgtagccg gttcgccacc 1561 accagcagcc cattcgccta atgaagcgcc ggatgtcaac tttggagtgg gttcctcgtc 1621 gggcaactcg acgcctggtc gcacttcttt aacaccctcc atgaagccac atcctgaacg 1681 cattgcccct ttgagggaga gacaacttgc tatggctgta caagcccaag gcggaggtgc 1741 cttccccgag aagaccgcta gaggcactcc cattaaacgc gccaaatggc atttgggcat 1801 tcgatcgcaa agcaagccga acgacattat gctggaggtt tatcgtgcca tgaaagcctt 1861 agattacgag tggaaaatca tcaatcccta tcatgtgcgt gtgcgccggc aaaatatcaa 1921 aaatggcatc tattccaaaa tgtctttgca actctatcag gtggatgcta aaagttatct 1981 cttggacttt aaatccctaa ccaatgatga ggtggagcag ggcgatgatg tgatattgga 2041 gagtttgaca ccaccgcctt tgagtactag cggcataatg ccgccacagc caacgggaca 2101 tcataccatg gagttctttg aaatgtgtgc cgctttaatc atacaattag ctcgctaagt 2161 aacaacccgg cgttatagat gctgcaagcc tggattttct aaatttttat tagtaatttt 2221 ataaactata ccaaaaaaaa gaacacaaaa caatcccctt cccctctcta aataactatt 2281 gaacacccac atataaatca attacatact tgttgtttgt cataaattct attattatta 2341 tgattattat ccatcgacta taagtacgat taaatttaaa acctttatgt tatcctaaat 2401 ggctatcttt actaggtcat ctcccaaaa