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LOCUS XM_013249895 3362 bp mRNA linear INV 02-SEP-2023 (LOC106085572), transcript variant X3, mRNA. ACCESSION XM_013249895 VERSION XM_013249895.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249895.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3362 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3362 /gene="LOC106085572" /note="ras GTPase-activating protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106085572" CDS 399..3113 /gene="LOC106085572" /codon_start=1 /product="ras GTPase-activating protein 1 isoform X3" /protein_id="XP_013105349.1" /db_xref="GeneID:106085572" /translation="MQSLQKQLRDWPKRLSVTLGGERPAIIAPPESEWYHGRLDRYSA ESRLRGSSKVGSYLVRESDRKPGSYVLSYFGRTGINHFRITAVCGDFYIGGRQFISLS DLVGYYTSCSDLLKRERLVFPVPPPEPVNDKKRVVAILPYTKMPDTDELSFQKGDIFF VHNDMGDGWLWVTAHRTGEQGMIFRELVEDLDPAIDPNTVFPWFHPNCTKNEAVDMLV KAGPGSFLVRPSDNSPGDYSLFFHINNQIQRFRIEKKGVRYLMGGRTFECLDAVINRY RKEQIVEGHCLSHPVVNGTQPEYSQQYVVEKAAEKIYATLRECRDQIGLKKIKGIKHH GHLNKKSDKTAKWKQLYFALISECSETHLCFYDNPKKTKPKGLIDLSCAYLYQCHDSL WERPYCFQIVERALPCLATVTYLCAPSQESYVEWINALKAQCASQLSKAQKKVPRLRE LRSLTLHILEAHRLPFKLVPHPYCSISLNQVKVGKTKVKIAPDPVWEEEFVLDDVPPD VVSLTITLISRGKRGKDSEVAELTIDLASLKNGHETEEWYQLTGMTPMGEWGSLRLRM RYLDDLIMPCEEYSPLQQLLLEPELYSVKALAELCHNDRVPLATSLLRVFRHEKRETE LIRVLCQAEIARENETTTLFRGASLATTLMDLYMRTECTGFLQAAISETIQRIMDSKQ SAELNPTKMDVNDDACSNAEFLLQILDLVTHSIFTSPEACPRSVRFICNCLQKAVVAK WPTERLVRTRVVSGFIFLRLLCPSLLNPRQFGLVNETPPAAATRSLVMVAKCLQNLAN LIEFGGKEQYMEVVNPFILKNKERMIVFLDQLSMVTDPNPPPGWNSEQSSNQSPQDTG RELATLHHICVSYLPELQELSNILSIKKLVTVTDMLTKHKLKYREMIS" misc_feature 459..746 /gene="LOC106085572" /note="N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP); Region: SH2_Nterm_RasGAP; cd10353" /db_xref="CDD:198216" misc_feature order(519..521,576..578,639..641,645..647) /gene="LOC106085572" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198216" misc_feature order(642..644,720..722) /gene="LOC106085572" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198216" misc_feature 795..971 /gene="LOC106085572" /note="Src Homology 3 domain of Ras GTPase-Activating Protein 1; Region: SH3_RasGAP; cd11788" /db_xref="CDD:212722" misc_feature 1002..1226 /gene="LOC106085572" /note="C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP); Region: SH2_Cterm_RasGAP; cd10354" /db_xref="CDD:198217" misc_feature order(1026..1028,1080..1082,1143..1145,1149..1151) /gene="LOC106085572" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198217" misc_feature order(1146..1148,1224..1226) /gene="LOC106085572" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198217" misc_feature 1383..1700 /gene="LOC106085572" /note="RAS p21 protein activator (GTPase activating protein) 1 Pleckstrin homology (PH) domain; Region: PH_RASA1; cd13260" /db_xref="CDD:270080" misc_feature 1743..2114 /gene="LOC106085572" /note="C2 domain present in RAS p21 protein activator 1 (RasA1); Region: C2_Ras_p21A1; cd08400" /db_xref="CDD:176045" misc_feature 2106..3110 /gene="LOC106085572" /note="Ras GTPase Activating Domain; Region: RasGAP; cl02569" /db_xref="CDD:470620" misc_feature order(2211..2213,2319..2321,2325..2327,2331..2336, 2340..2342,2349..2351,2361..2363,2646..2648,2670..2675, 2682..2687,2694..2696,2757..2759,2766..2771,2778..2780, 2790..2792,2796..2798,2811..2816) /gene="LOC106085572" /note="RAS interface [polypeptide binding]; other site" /db_xref="CDD:213340" polyA_site 3362 /gene="LOC106085572" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caatcaaagt gtgaagtaaa gtgaagaact gaaaattaaa attaagtgtt taagtgttta 61 ttgagaataa gacaaagtac aaatacttcg aaacaagttt gtattgatgt attgaagatt 121 ataagattga agatataaga ttattattgc gaaaagctgt ggctaatttt gtctttggct 181 ggtcggacgt cgacgtcggt cggtcggtct tttgtgtttc gtgttttgta tatcttcata 241 gataaaaaat atgtgaatgc gaaaaaagaa taaataataa ttgaaaaata ataaaaaaag 301 ctgtgagtgc tacaaatgaa aataaaaaag attttatgaa aacagcaccc aaatcaaaga 361 aggaattatt ttgtggggtt tgattaaatg ttggtcctat gcaaagttta caaaaacaat 421 taagggattg gccaaaacgc ttatcggtga cacttggagg cgaacgacct gccattatag 481 cgccaccaga aagtgaatgg tatcatggac gtttggatcg ctattcggct gaatcacgtt 541 tacgtggaag cagcaaagtg ggaagctatt tggttcgcga aagtgatcgc aaacccggtt 601 cttatgtact cagctatttt ggccgtactg gcattaatca tttccggatt accgccgttt 661 gtggtgattt ctacattggc ggtcgtcaat tcatctcact cagcgattta gtgggttact 721 acacctcatg cagtgatctg ctaaagcgtg aacgtctggt ctttccggtg ccaccgccag 781 agcctgtaaa tgataaaaag cgagtggtgg ccatattgcc ctacaccaaa atgcccgaca 841 ccgatgaatt gagcttccaa aaaggagata tcttttttgt gcacaatgac atgggcgatg 901 gttggttgtg ggtaaccgct catcgtactg gggaacaggg tatgatattt cgtgagctgg 961 tggaagattt ggatcctgcc atagatccca atacagtatt tccatggttt catcctaact 1021 gcaccaaaaa cgaagctgtt gatatgttag taaaggctgg tcctggtagt tttttggtac 1081 gccccagtga caactcacct ggcgactatt cactattttt ccatatcaac aatcaaatac 1141 aacgttttcg cattgaaaag aagggtgtgc gctacctcat gggaggccgc acattcgagt 1201 gtctggatgc tgttatcaat cgctatcgca aggaacagat tgtcgaaggc cattgcctta 1261 gtcatccggt agtgaatggc actcaacccg aatacagcca acagtatgtg gtggagaagg 1321 ctgccgaaaa gatctatgcg actctgagag aatgtcgcga tcaaatcggt cttaagaaaa 1381 tcaaaggcat aaaacaccat ggtcacctca ataagaagtc cgacaagact gccaaatgga 1441 agcagttgta ctttgccttg atcagtgaat gttccgagac gcatttgtgc ttctatgaca 1501 atcccaaaaa gactaaaccc aaaggtctca ttgatctttc gtgtgcttat ctctatcaat 1561 gccatgattc attgtgggag cgtccctatt gttttcaaat tgtggaaagg gctttgccct 1621 gtttggccac ggtaacctat ctgtgtgcgc ctagtcaaga gagttatgtg gaatggataa 1681 atgcactgaa agcacagtgt gcctcccagc tgagcaaagc acaaaagaag gtgccgcgtt 1741 tgagggagct acgcagcctc actttgcata ttttagaagc tcatagactg ccatttaaat 1801 tagtgccaca tccctattgt agtatttcac tgaaccaagt caaagtgggc aagaccaagg 1861 tgaagatagc gcccgatcca gtgtgggagg aagagtttgt tctggatgat gtccccccag 1921 atgtagtctc tctaaccata acccttatat ctcgcggcaa acgtggcaag gacagtgagg 1981 tggccgagtt gaccattgat ttggccagct tgaagaatgg ccatgagacc gaagaatggt 2041 atcaactcac cggcatgact cccatgggtg aatggggttc cctgcgttta cgtatgcgtt 2101 atttagatga tctcattatg ccatgtgaag aatatagtcc actgcagcag ctgctgcttg 2161 aacccgagct gtactctgtc aaggctttgg ccgaactctg ccacaatgat cgtgtgccgc 2221 tggccacctc cttgttgcgt gtcttccgcc atgagaaacg tgaaaccgag ctgatacgtg 2281 tcctatgcca agcggaaata gcgcgagaaa atgaaaccac cactttattc cgtggtgcca 2341 gtctggccac taccctaatg gatttgtata tgcgcacaga atgtacgggt ttcctacaag 2401 cggccatttc ggagaccata caacgtatta tggatagcaa acaatcggct gaattgaatc 2461 ccacaaaaat ggatgttaac gatgatgcct gctctaatgc tgagttcctt ttgcaaattc 2521 tcgatttggt gacacattcg atattcacct cacccgaggc ctgtccacgt tcggtgcgtt 2581 ttatatgtaa ttgcttgcaa aaggctgtgg tggccaaatg gcccacagaa cgtttggtga 2641 ggactcgtgt ggtgtcaggc ttcattttct tgcgtttgtt gtgtccctcg ttgctgaatc 2701 cacgtcaatt tggtttggtc aatgagaccc caccggcagc ggctacgaga tctttggtta 2761 tggtggcaaa gtgcttgcag aacttggcga atttaatcga attcggtggg aaggagcaat 2821 acatggaggt agtcaatccc tttatactca aaaataaaga acgcatgata gtctttctcg 2881 atcaattatc catggtgaca gatcctaatc cacctccagg ttggaattct gaacaaagct 2941 ccaatcaatc tcctcaagat acgggtcgtg aacttgcaac attgcatcat atatgtgttt 3001 catatttacc ggaattgcaa gaattgtcaa atatactctc aattaagaaa ttagttactg 3061 ttaccgatat gcttacaaaa cataaactta aatatcgtga aatgattagt taagctaaac 3121 aatgaaatga aactaatcat aatgatgaag aagaacacac acacacaaac acaaatagaa 3181 cgcaacaaga acgagaacat ttataatacg ctacaagcca agtaacaaga aaggaacaaa 3241 acaaatacac aaacatacat acatacatac atatgaagaa agacatttaa ctgccataat 3301 gatgatgaag ataaaggata tacatatatg tggctaaaat tgaaaaatag atatcactgg 3361 aa