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LOCUS XM_013247236 8861 bp mRNA linear INV 02-SEP-2023 (LOC106083916), transcript variant X6, mRNA. ACCESSION XM_013247236 VERSION XM_013247236.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247236.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8861 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8861 /gene="LOC106083916" /note="rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106083916" CDS 232..4782 /gene="LOC106083916" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X3" /protein_id="XP_013102690.1" /db_xref="GeneID:106083916" /translation="MKTFNISVIGLSGTEKDRGQVGVGKSCLCNRFIRPMADDYFIDH ISVLSQSDFSGRVVNNDHFLYWGDVHKSTDEGTEYTFHIIEQTEFMDDSTFQPFKVGK METYLKRCTTTKVFSAEKLMYICKNQLGIEKEYEQKILPDGRLAIDGFIVVFDVSPVP NRNIEKQVEFVQNAITLILKNKKPLVLVTTKNDDSCDLYIREAEKICQRKDYKGMIQL VETSAHESINTDLAFLLLAQMIDKVKNRIKIIPYQEAARSRKELLESRSEAVTRLIRN QITDYHVLWTHGSKMLAQFREWTEFLNIFGHDAGQKLFRRHMKKLRDDYMNQRLHQYL DKFARTLEYMLPDVNALSTSDDDIWECAKGYIRNHLEFDQYFFECPQATWQELVDMDE TEDEARIPFDVLETSEAETVFRNFLNSVQQDKKKIGWKQQFKILLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDEIIEKSKQNFIELLLEHAQFFQQFKNVDI ITQEDVRQITDILQDDSRYKIMDRLDQERRVILFQHLGFMHCPIRDHCPFYHSCVDNF IEEILADKSAGSHKTLGSGGSGSWKSQGSDKTLNLLIVGSEHLASDLLNDIRMCTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNLQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGLRLAEMLHCDFIDHQQSHQKYVYEI LNIVIDSLRVSEMKTLETFPPNQTDLRILVCMFCGDQYDIENLVNPLIDESTFCKAME HSVVVDVFIGDSKKRVEFILSSYHGINQYRDELIHGFIFVYSTKRRSSLANLSVLVSQ NANIPLQIIAITESGGANAFFSSELCQFLITEGNSLADRYKASFMTFSADQYVKFAFY SPFLKNAWDNKYDVENLHVEESITLDSGEGTLENSVKLPRPPPRHESYMLSSTLGTDG SGSENYEMLPTRSLNSLNEERDISLDEIYEESNEKPKMVHQKWLDDKTDGRRNINKNS IWNNFGGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKQPGKLNMKNFQLVSEAVAKMNF GGDSYLPICESGDKDSKRYTQFDHSQLDGDEEDSEELAEYEQIYENEDCTESDSCASS IERKNRQQNAYYKQINKKPPVNKKTKKKKVAIPVQTPRVPTMFGSYVSPPEIPLHYQR MVTAEKKKIGDPTIINDMIKTDKSPEYTMVPDAPVLFGAPETLNEYNMNAKCLKEFEK SEKRRLKEENTRLRKLQEKEKEQEKKLKRKLKQNSKGFPDTESQFEKLMISDKVEIPI FLIKCIEYIEKEGLDSEGIYRVPGSRAHVDLLFQKFEEDSNTVIELLDIPVNAVATAL KDFFSKRLPPLFSKDIIKELEEVAGSRTVCGSKVNVEVKTDRSCRLMALKTLLEKLPP ANFAILKYIFQHFVQVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLED IVQTMIDQYPYLFCGEDAFVMV" misc_feature 286..309 /gene="LOC106083916" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(292..312,619..621,799..804,820..822,895..903) /gene="LOC106083916" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 448..450 /gene="LOC106083916" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 460..468 /gene="LOC106083916" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature <673..951 /gene="LOC106083916" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature order(799..804,817..822) /gene="LOC106083916" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 895..903 /gene="LOC106083916" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 991..1230 /gene="LOC106083916" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1897..>3096 /gene="LOC106083916" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cl41781" /db_xref="CDD:477764" misc_feature 4180..4749 /gene="LOC106083916" /note="GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to...; Region: RhoGAP; cl02570" /db_xref="CDD:470621" misc_feature order(4252..4254,4366..4368,4378..4380,4624..4626, 4633..4638,4720..4722) /gene="LOC106083916" /note="GTPase interaction site; other site" /db_xref="CDD:238090" misc_feature 4252..4254 /gene="LOC106083916" /note="catalytic residue [active]" /db_xref="CDD:238090" polyA_site 8861 /gene="LOC106083916" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcctcggctt cgtactctgg tgacaagtcg ggtgtgtatt tacgtggaaa aagaattgtc 61 gggggcctcc ttgcaccatt attttgcgta aaactcggat aaacaatttt tataatggct 121 caacataccc cagaacaacg aaattcagag aaatgcgagc gtggaatcta aaactaatac 181 aatagttaga aaataattaa caagaaacat tttgagtgca gtttataaaa gatgaaaacg 241 tttaatatat cggtcatcgg tctctcgggg actgagaagg accgaggaca agtcggtgtg 301 ggcaaatcat gcttatgtaa cagatttata aggcccatgg ccgatgatta cttcatagat 361 cacatatcag ttttgagtca gagtgacttc agtgggcgag ttgttaataa cgatcacttt 421 ctatattggg gcgatgtgca caagagcacc gacgaaggca ctgaatacac ctttcacatt 481 atcgaacaga ccgaattcat ggacgattcc acattccagc cctttaaggt tggcaaaatg 541 gagacctacc tgaagcgatg caccaccaca aaagtatttt cggccgaaaa actcatgtac 601 atttgcaaga accaattggg aattgagaaa gagtacgaac aaaagatatt gcccgatggc 661 cgattggcca tagatggctt cattgtggtg tttgatgtca gccctgtgcc aaatcgaaat 721 attgaaaaac aggtggaatt tgtacaaaat gcaattactt taatactcaa aaataagaag 781 ccattggttt tggtgaccac caaaaacgac gattcctgtg atctgtacat aagagaggcg 841 gagaagatat gccagcgtaa ggattacaag ggcatgatac agctggtgga gacatcggcc 901 catgaatcca taaatacgga tttggctttt ctgctgctgg ctcaaatgat agacaaagtg 961 aaaaaccgca taaaaatcat tccatatcaa gaagctgcta ggtcgcgcaa agaattgctc 1021 gaaagtcgtt cggaggcagt gacgcgtctt ataagaaatc aaataaccga ttatcatgtc 1081 ctatggacac acggctcaaa aatgcttgct caattcagag aatggacaga atttttgaat 1141 atttttggcc acgatgccgg gcagaagttg tttcgtcgtc acatgaagaa gctgcgtgac 1201 gactatatga atcaaaggct gcatcagtat ttggataaat ttgctcgtac actcgaatac 1261 atgttgccag atgtgaatgc tctctccacc agcgatgatg atatttggga atgtgccaag 1321 ggttatatta gaaaccattt agagtttgac caatactttt tcgaatgtcc ccaggccacg 1381 tggcaggagc tggtggacat ggatgagacg gaagatgagg cgcgtattcc ttttgatgtt 1441 ttagagactt cagaggcaga gacagtgttt aggaattttt tgaattctgt gcaacaggac 1501 aaaaagaaaa taggctggaa acaacaattc aaaatacttt tggaagagtc cggctttgtt 1561 actcccggca agcagttgtc tgaagttcgc gtactcttta tgggtcgtga atgttttgag 1621 gccttgtccg agcatgactg ccagcaaata tatgacatac atcaggatga gataattgag 1681 aagagtaaac aaaattttat tgagttactg ctggagcatg cccaattttt ccaacagttc 1741 aaaaatgtgg atattataac ccaagaagat gtaagacaaa taacagatat actgcaagat 1801 gattccagat acaagattat ggatcgcttg gaccaggaga gacgtgtcat tttattccag 1861 catttaggct ttatgcactg tcccatacgt gaccattgtc cattttacca cagttgtgtt 1921 gacaatttca ttgaagagat cttggccgac aagtccgccg gtagccataa aactctggga 1981 agtggtggca gtggcagctg gaagtcccaa ggttctgata aaactctcaa cttgctcatt 2041 gtgggttctg agcacttggc cagtgatcta cttaatgaca ttcgcatgtg caccggctcc 2101 aaaggcgaat atatatatga gaatcaaaca tattatctta actaccgcat agcgaatgga 2161 gatatggaag cctttaaagc tattgatgtc tattcaagcg gtttgatttg tgtctactca 2221 aatctgcagt cttttgaaac tcttaaggac aatctcgaac gaacactgct ttgcaatttg 2281 gaattagagg ataagtttga aaatcttcca atagtattag tctatcaacc acaagatcta 2341 aaggagaacg aagttgagta tctgagaaat gagggtttgc gtttggccga aatgttgcat 2401 tgcgatttca ttgatcacca gcaaagccat cagaaatatg tctatgaaat tttgaatata 2461 gtcattgatt ctttgcgagt ttccgaaatg aagaccttgg aaacttttcc acccaatcaa 2521 acggatttgc gtattttagt gtgcatgttt tgtggcgatc aatatgacat agaaaatctg 2581 gtaaatcccc ttatagatga atccacattt tgcaaagcaa tggaacattc cgtagttgtg 2641 gacgtcttca taggtgattc caagaaacgt gtggaattta tattgtcatc ataccatggc 2701 ataaatcaat atcgtgatga attgatacat ggttttatat ttgtgtactc caccaaaagg 2761 cgctcttcct tggctaatct tagtgtcttg gtatcgcaaa atgccaatat acctttgcag 2821 attatagcga ttaccgaaag tggaggagct aatgcatttt tcagcagtga actgtgtcaa 2881 tttcttataa ccgaaggtaa ttctttggca gatcgttaca aagcaagctt tatgacattc 2941 tcagcggatc aatatgtaaa atttgctttc tatagtccat ttttgaaaaa tgcttgggat 3001 aacaaatatg atgtagaaaa tctacacgtc gaagagtcaa ttacattgga ttcaggcgag 3061 ggcacacttg agaactcggt taagttgccc agaccaccac cgcgacatga aagctatatg 3121 ttatcgagta ccttaggtac ggatggctcc ggcagcgaaa actacgaaat gcttcctaca 3181 cgttctctaa actcattaaa tgaagaaaga gacatatctt tagatgaaat ctacgaagaa 3241 agcaacgaaa aaccaaaaat ggtccatcag aaatggttgg atgataaaac agatgggcga 3301 cgcaatataa ataaaaattc catttggaat aattttggtg gctcaacgca cgcatataca 3361 actggtcgta gacatataga ttctaatttg aataaaattc gtccaaaagg tccaagtcag 3421 accctaaagc aaccaggaaa attaaatatg aaaaattttc agttagttag cgaagctgta 3481 gcaaaaatga atttcggagg cgattcctat ttgcctattt gtgagagtgg cgataaggac 3541 tccaaacgtt atacacaatt cgatcattct cagttggatg gcgatgagga ggactctgag 3601 gagttagccg aatatgaaca aatttatgaa aatgaagact gtaccgaatc cgatagttgt 3661 gctagttcaa tagagcgtaa aaatcgacaa caaaatgcct attataaaca aatcaataaa 3721 aagccacccg tgaacaaaaa gacaaagaag aagaaagttg ccataccggt gcaaactccc 3781 agagtaccta ctatgtttgg ttcatacgta agcccaccag agataccatt gcattatcaa 3841 agaatggtaa ccgccgagaa aaaaaaaatt ggcgatccca ctattataaa tgatatgata 3901 aaaaccgaca aatcgccaga gtacaccatg gtaccagatg cccctgtctt atttggcgct 3961 cccgaaactc ttaacgaata caacatgaat gccaaatgtt taaaggaatt tgaaaaatct 4021 gaaaagcgtc gcctaaagga ggaaaatact agactacgca aactgcaaga aaaggaaaag 4081 gagcaagaaa agaagctgaa acgtaaatta aaacaaaatt ccaagggttt ccccgacact 4141 gaatctcaat ttgaaaagct tatgatctcc gataaagtgg aaattcctat atttttaatc 4201 aaatgcatag aatatataga aaaagaaggt ctggattccg aaggcatata tagagttccg 4261 ggcagtcgtg cccatgtaga cttgttattt caaaagtttg aagaagattc caatactgtt 4321 attgaacttt tggatatacc tgtcaatgcc gtggccacag ctctcaagga ttttttctca 4381 aaacgattgc ctccattgtt tagcaaggat ataataaagg aattggagga agttgcgggt 4441 tcacgtacag tgtgcggctc taaagtgaat gttgaagtaa aaaccgatcg aagttgtcgt 4501 ttaatggctt taaagacgtt attggaaaaa ttaccgcctg ctaattttgc tatattgaag 4561 tacatatttc agcattttgt gcaagtttcc gacaattcca aactcaatag catggatagt 4621 aaaaatttgg ctatatgctg gtggcccacc ttgattccta tcgattttac cgatatgggc 4681 cattttgagc aattgcgtcc ttacctagaa gatattgtac aaacaatgat tgatcaatat 4741 ccatatctgt tttgtggaga agacgctttt gtcatggtat aaatgaacac ccagtatttt 4801 ctttatttaa tttgtcggta tatatataaa tatatgtatg tgtgtttatg tgttattaag 4861 ttgtaaaaca acaacaaaac aaaaaaagag aaaaaacagc aaaatacttt ttatagtata 4921 aataatttcg atataagcga gatgaaagga aagaaaagat caaaaaaaaa aagaaagaaa 4981 aagaaatcga aagtaattgt gctcacatac caaaacgtgt gtattccggt tttgatgagt 5041 gcgtgtggtg taaatcattg tttttagttg atagttgatt tttaaattat tattataaaa 5101 aaaatatgta tttcattagt taattgtact atgtaaattg atgtctccgt gtgtttgcgc 5161 gtgtaatcgc gtaagtaaac tttagttgta gtaaacagaa gtgagattta aaacaacaac 5221 agcaaccaca acaaccgcaa caaacccgaa taaataagaa aaaacttaat taagaagcaa 5281 atggaaataa aacaaatcaa gcttaaaact taattggcaa gccaaaagat agcaaaaaaa 5341 gaaattcata caaataaaca caaaaattaa aattataata acaatgataa tgataataaa 5401 acagccagac atacatagat agagaacgaa gatttgaaac gaagccaata ttaattcata 5461 agaagccaac cgatttttat caaactccaa catataatat tatgtaggtt aattcctcca 5521 ccgccgccta agttttaatt agccataatg cgagttacac gctctcgcat tcttgtaaac 5581 tcttattaat taatgtgtgc ttttttaaca acatatacaa aatcacttat ttataaattg 5641 aatatattgg aaaaaaacgt attgtcaatt tgtattactt tcctacatac atgtatagag 5701 tttttttcta tgacatttac atcaacttct acttcaaaac tatctatcta gaatttctct 5761 taaagatcaa atgtttgcac taaagagatt tttttgtttt atttttacca gttgttatca 5821 ccatagcaaa aatttaaact taccctacat atcttcttga gggaatgaat gcacaacaac 5881 aacaacaata aacaatgtat gtatgtatat tttgtaatag gaaaacagct tatcttagga 5941 acagaagcta tttattccga aagtttgtct cactctctct ctctattgtg aattgaaatt 6001 tattttgtga cctgttactc ttgctattgt actttttaca aaactcactg ttattgtttc 6061 tcaatattta actctcctct cacaactacc aaaagtagca aatagagcta aggaatacct 6121 atttggactt tttattaaaa atgcatcagt gacggtttta ataattttat tgaaataaaa 6181 ttaaaatatt tttttatctt cagcagaata ttggagagat tactttattg aatttttggt 6241 atttgtgtaa acattgtccc ctaaccacca aaaaggtgaa aatattcagt aaaaaaaaca 6301 actcttgcgt ccatacagtt ttctaaatgt aaaataaaaa atgacattac gatataaagg 6361 cgggttatac ggctgtttag acgtttagat ttattagtca tatatgacta caacccagca 6421 aaattaataa ttaattagtt ataccctcca ccatgggatg gggtatacta attttgtcat 6481 tctgtttgtc ctcgtaatat tcctctcaga ctccataatg tatatacatt cttgagtcat 6541 gtcaatttaa gtcgatctag ccatgtccgt ccgtctgtct gtcgaaagca cgctatcttt 6601 cgaaggagta aagctagccg cttgaaattt tgatatagct gccatataac cagacttctt 6661 gagcctctag aggccgcaat tcttatctgt tttggctgaa attttgcacg acgtgttagg 6721 ttatgatttc gaagaactgt gctcagcatg gtctaaatct caaaatttta cacaattacc 6781 tcactatggt gtccaacatt caattcaatt atgggccgaa tcggaccata acttaatata 6841 gctccaatat tatagcaatt cctttctttt atcctttgtt tgccaaaaaa gagatattgg 6901 gaaaagaact cgacaaatgc gatctatggt ggaggtttta taagatttga cccggccgaa 6961 cttagcacgc ttttacttgt ttcaaatagt ttttggccaa acgttgccat gctggatgat 7021 actgatccca ccaaatatag aacattatct tttcgtcatg gacatatggc ctaggcgctg 7081 atttagctgg ctggctggct ttcgttgtgt atcaaatttg catcattatt tctgtatggt 7141 tcaagctgca tttccgatat gcaaaatcac ctttcaatgt ctctgattgt atcgtaatct 7201 caggcatagc cctctaatca ggcatagccg tagccctcta tcgtaatctc aggcataacc 7261 gtagccctct aatccctctg ttcattgcgc aaaccacaat tttttttttg agttggtgca 7321 tgtttaccag ctgttttcta aaatgcggaa agttaccaga cttcactgta aaatatttaa 7381 tttaacatta tgacccttac aaatttcatt ttattatttg ctgttttatt ttagtactgg 7441 atacacaagc cgtgaaagac acaaataaaa cgcaaaaatg tgtcctggta gtagcgtttt 7501 cccacctgtc aaataggaat aaggaaaaac gtaaaaatat tttaaaaatg tataaaataa 7561 aatttatttt tttctgccat tcataataga gttatttctg cgggtggcca tatttaattg 7621 tgaaaaacat atcagggcaa ttctgaaggc agatttcctt tgatttttcg ttgtactgga 7681 taggtgttat ttccatacaa ttttcgctgt actgcactgt atagtactaa aataaaacaa 7741 ggaaatttat gccatatatt gtctaaatcc ggatatttaa attttataat ttaaatttat 7801 tgttgttttt attttggttt ccccttttta atacttatgt catctctata gcgaattttt 7861 tatctatttt aatactcata gactttttta atattttttt aactatattt gtttttttaa 7921 tttctttaag tttattttat ataatttttt gtttttttag tttattattt tttttcagag 7981 cctcgtattt ttttaatttt catgcccact tgactccatt ttttttaaga aaaaatacag 8041 ttatgtggtc catatatgtt ttccttagaa ctcttcgaat gtattttcta aacaaaacaa 8101 aaacaaacac aaaataatgt tttataaaaa tgctaaaaat tcgtgtaata aattaaaatg 8161 ctattaagtt aaacaaaaaa acaaacatat tataaaaggt gttatttcta aaaaaatgaa 8221 taaaaaaaga aaacgaaaac gaaaacatgc ataaatgtat taacgaaaca aatgattgca 8281 taatttatat gaacttctct atatgtgtaa tgtgtctaaa acgcaccata atcttcctga 8341 tttaaatata aaataataat aattataata atatgtatta ttattagtaa ttaaaaacaa 8401 ataggtatta caaataataa gatattttat aaaatgacga aacaaaaaca acaatttagt 8461 gtaatttgta tgtataatgt cagtgtctat gtgtctattg cataaacaac caattattaa 8521 ataactaata ttaatattaa tattatatat atatattata ttatatattt actactgatt 8581 aacgtgatgt ggtgtattga tatttttaaa aacgaaccca aaaaaaagaa gcgaaaaatt 8641 aaaaaaaaaa tacgaaagca aattgatatt aacggtcatt tctgatattc atatacacac 8701 actcatgcat atacatgcgt ggcatttgtg tatgcgttcg tgtactaagg taaaacaaaa 8761 gaaacaaaca taacaaaaaa aaaaaaacga ccgtcgtata tgaggagtaa aaaccaagaa 8821 gaagtaaaga aataaaataa ttttgaaata actgtgcaaa a