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LOCUS NP_709154 387 aa linear CON 24-AUG-2016 ACCESSION NP_709154 VERSION NP_709154.1 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 387) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 387) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 387) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 387) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 387) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN44861. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..387 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..387 /product="hypothetical protein" /calculated_mol_wt=42316 Region 1..382 /region_name="PLPDE_III_yhfX_like" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme yhfX; cd06811" /db_xref="CDD:143486" Site order(28,61,63,84..85,87..88,94,114,127,130,134,162..165, 284..287,291,293,295,298..299,373) /site_type="other" /note="dimer interface [polypeptide binding]" /db_xref="CDD:143486" Site order(59,61,82,107,151,163,193,235..236,254..257,298) /site_type="active" /db_xref="CDD:143486" Site order(59,61,82,107,151,193,235..236,254..257) /site_type="other" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]" /db_xref="CDD:143486" Site order(61,163,193,257) /site_type="other" /note="substrate binding site [chemical binding]" /db_xref="CDD:143486" Site 61 /site_type="active" /note="catalytic residue [active]" /db_xref="CDD:143486" CDS 1..387 /gene="yhfX" /locus_tag="SF3399" /coded_by="complement(NC_004337.2:3479040..3480203)" /note="Code: E; COG: COG3457" /transl_table=11 /db_xref="GeneID:1023385" CONTIG join(WP_000497332.1:1..387) ORIGIN 1 mfvealkrqn palisaalsl wqqgkiapds wvidvdqile ngkrlietar lygielylmt 61 kqfgrnpwla ekllalgysg ivavdykear vmrraglpva hqghlvqipc hqvadaveqg 121 tdiitvftld karevsaaav kagrvqpvll kvysdddfly pgqesgfvqh slheviaeik 181 klpglhlagl thfpcllwde aagkvlptpn lhtlvqardq laksgiaieq lnvpsatsct 241 slpllaeyga thaepghalt gtipanqqgd qperiamlwl seishhfrgd sycygggyyr 301 rghaqhalvf tpenqkitet nlktvddssi dytlplagey pvssavvlcf rtqifvtrsd 361 vvlvsgiqrg epeivgryds lgnplea