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LOCUS NP_708948 678 aa linear CON 24-AUG-2016 ACCESSION NP_708948 VERSION NP_708948.2 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 678) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 678) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 678) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 678) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 678) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN44655. On Dec 9, 2004 this sequence version replaced NP_708948.1. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..678 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..678 /product="glycosylase" /calculated_mol_wt=72624 Region 1..678 /region_name="LpoA" /note="Outer membrane lipoprotein LpoA, binds and activates PBP1a [Cell wall/membrane/envelope biogenesis]; COG3107" /db_xref="CDD:442341" Region 66..92 /region_name="TPR repeat" /note="TPR repeat [structural motif]" /db_xref="CDD:276808" Region 99..127 /region_name="TPR repeat" /note="TPR repeat [structural motif]" /db_xref="CDD:276808" CDS 1..678 /gene="yraM" /locus_tag="SF3188" /coded_by="NC_004337.2:3285606..3287642" /note="Code: R; COG: COG3107" /transl_table=11 /db_xref="GeneID:1027136" CONTIG join(WP_000249126.1:1..678) ORIGIN 1 mvpstfsrlk aarclpvvla alifagcgth tpdqstaymq gtaqadsafy lqqmqqssdd 61 trinwqllai ralvkegktg qavelfnqlp qelndsqrre ktllaaeikl aqkdfagaqn 121 llakitpadl eqnqqarywq akidasqgrp sidllralia qepllgakek qqnidatwqa 181 lssmtqeqan tlvinadeni lqgwldlqrv wfdnrndpdm mkagiadwqk rypnnpgakm 241 lptqlvnvka fkpastnkia lllplngqaa vfgrtiqqgf eaaknigtqp vaaqvaaapa 301 advaeqpqpq tadsvaspaq asvsdltgdq paaqpvpvsa patstaavsa panpsaelki 361 ydtssqplsq ilsqvqqdga sivvgpllkn nveellksnt plnvlalnqp enienrvnic 421 yfalspedea rdaarhirdq gkqaplvlip rsalgdrvan afaqewqklg ggtvlqqkfg 481 stselragvn ggsgialtgs pitprattds gmttnnptlq ttptddqftn nggrvdavyi 541 vatpgeiafi kpmiamrngs qsgatlyass rsaqgtagpd frlemeglqy seipmlaggn 601 lplmqqalsa vnndyslarm yamgvdawsl anhfsqmrqv qgfeingntg sltanpdcvi 661 nrklswlqyq qgqvvpas